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Properties
| Property Name | Value |
|---|
| Product | tbc domain-containing protein kinase-like isoform 3 |
| Orig transcript id | gnl|cribi|Naga_101386g1.2450.mrna |
| Orig protein id | gnl|cribi|Naga_101386g1.2450 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:1034433..1035418 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3713 ID=rna3713|Name=rna3713|organism=Nannochloropsis gaditana|type=mRNA|length=1066bp
TTGCTCTGGTGTCTCGAAGATACACTTGGCATCGCCGCTCATCCCTATCG
TGAACCCAACCACCCTCCCCACTGCATACAGGTAACACAGGGCTAGGTAT
CCACGCAGGGAAATGGCAGCGCAAGAGGACGCTGGAACATTGCGGCAGCG
GTTGCAGGAAAAGATCCACGAACTTGCCAACGAAAAACTGCCCACGCTGA
ACGCAGATCGTGGGGGTACGCTACATGTGACAGTACGGGATGTTCGTAAC
GTCCTGACTCCCCCCACGGTGGCCGTCACGCCTGAGGAGGCGGAGGACGA
TGCGGCCTCGAGGCCCGGGGAGGATGGGGAGGCGCTCTTGAACGGGCACA
CGAGTCTCCATGCCCACAATTATTCGCACAAGAATTTGCGGTTTTTGGTA
GAAGTCTCGCCGAGCACGGCGGTGATGACGGAGGAAGGCGAGGCCCAGGT
CGAGGTGGAGGACTTGGGCGGGATCGCGACCTTTCCCCTGATGTCTTTGG
AGGCGAAGGTGGTGGTCCATTTCGGCGCCCGTTTGGAGCATTTTGTCCAG
GTGCCGTTACACAACCGTTACCGGGAGTCGGAGTTGGGACAGCTGTCGGA
CTGGCACGCGTCGGCGGCCGTGGAAGGGAAGGAGACAGAGACAGAGACGC
CAGGGGTGGAAGATTTGACGAATGTGCCGGCGGTGCGCTTAGTATTCAAA
TTTGAACGGAGGAACCGGGGAGAAGTCCAGCGGGTGATGGAGGAGTTGCA
AAAATTGCAGGAGGAGGTGGGGAGGTTGGGGAAAGGGGAAGGAGAGGGGA
GGGCGGGCGTGGGCAAGAAAGGCGGTGTCCGCACGGGGAGGAAGGGGGGG
ATTCAAAGCGTGGACGAGGACGAGGACGAGGAAGGGCGGGAAGATGCAAG
TGGGAGCAGGGTGCTGTCGCTCTGGCGCTGGGCGGTGGTACCGATGATTT
TCATCATCCGGGTAGGGGGACAGGTGGGGGGATTGGTGTGGCGACGGCGG
GCTATCTTCATGTTCATCGGCGGCACGCTTTTCTTCCATCTTCGGGGGGA
TGACTTGGCCGTGTAG back to topprotein sequence of rna3713 >rna3713-protein ID=rna3713-protein|Name=rna3713|organism=Nannochloropsis gaditana|type=polypeptide|length=246bp
MLSAQLRAEINKTDMDVPKIKQFCRNHPVGTIVDNKMRVKVWLALLLDGE
PPPPLPSLPPTALLVEEDARVVDADVKRTRGYLPIFQLPDTQDTVRKLLK
TYCLATGVKYKQGMHELLAPFVALSPDPPSPPLPVEAIYAMFFRFLSRYL
RPFFWDAGTRALQAGFARFELLLLYHDPELGTHLRRHDFPPALYLTPMLV
TLFAHNLEMYLVHRLWDSYLSVDDPAFVYFVALALFASKRYLLLPS back to topmRNA from alignment at CM002461.1:1034433..1035418+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3713 ID=rna3713|Name=rna3713|organism=Nannochloropsis gaditana|type=mRNA|length=986bp|location=Sequence derived from alignment at CM002461.1:1034433..1035418+ (Nannochloropsis gaditana)
ACAGGGTCGTGCTTTTTGCGTTGGCGGTCTTTTCGGCACTACGATCAAGG
TTTGCGTGGTACATCATTAGCCCTCAGCGGGGTCCTATACCATGTTGAGC
GCGCAACTTCGAGCTGAAATCAACAAAACAGACATGGACGTGCCCAAAAT
CAAACAATTTTGTCGTAATCATCCTGTGGGTACCATCGTCGACAACAAAA
TGCGCGTCAAAGTGTGGTTAGCGCTTCTCCTGGACGGggagcccccgccg
ccgctaccctccctcccccccacggccctattggtggaagaagacgcaCG
CGTTGTGGACGCCGACGTGAAGCGTACGCGCGGCTACCTGCCCATCTTCC
AACTCCCGGACACCCAAGACACGGTGCGCAAGCTCCTTAAAACCTACTGT
CTGGCTACCGGCGTCAAATACAAACAGGGCATGCACGAGCTGTTGGCCCC
GTTTGTAGCCCTAAGCCCGgaccctccgtcccccccacTGCCAGTCGAGG
CCATCTACGCCATGTTTTTCCGCTTCTTATCCCGGTACCTCCGGCCCTTT
TTCTGGGACGCAGGGACCCGAGCCTTGCAAGCGGGCTTTGCCCGTTTTGA
ACTCCTGCTTTTGTACCACGACCCCGAACTCGGCACGCATTTAAGGCGAC
ACgacttcccccccgccctgtaTCTGACGCCTATGCTTGTGACGCTCTTC
GGTgggtggaagagagggggggagggagaaggagggaagggatggagacg
gTTCTCGGAAGGCTGACAGTCAACCCTCGtttcgccttccttccctccct
ccctccctcttttcttccctccctccctccctctttcccctcctccattt
aATTCCAGCACACAACCTGGAAATGTACCTGGTCCATCGGCTGTGGGACA
GCTACCTGAGCGTGGACGACCCTGCCTTTGTCTACTttgtcgccctcgcc
ctcttcgccaGCAAGCgctacctccttcttccctcc back to topCoding sequence (CDS) from alignment at CM002461.1:1034433..1035418+ >rna3713 ID=rna3713|Name=rna3713|organism=Nannochloropsis gaditana|type=CDS|length=1476bp|location=Sequence derived from alignment at CM002461.1:1034433..1035418+ (Nannochloropsis gaditana)
ATGTTGAGCGCGCAACTTCGAGCTGAAATCAACAAAACAGACATGGACGT
GCCCAAAATCAAACAATTTTGTCGTAATCATCCTGTGGGTACCATCGTCG
ACAACAAAATGCGCGTCAAAGTGTGGTTAGCGCTTCTCCTGGACGGggag
cccccgccgccgctaccctccctcccccccacggccctattggtggaaga
agacgcaCGCGTTGTGGACGCCGACGTGAAGCGTACGCGCGGCTACCTGC
CCATCTTCCAACTCCCGGACACCCAAGACACGGTGCGCAAGCTCCTTAAA
ACCTACTGTCTGGCTACCGGCGTCAAATACAAACAGGGCATGCACGAGCT
GTTGGCCCCGTTTGTAGCCCTAAGCCCGgaccctccgtcccccccacTGC
CAGTCGAGGCCATCTACGCCATGTTTTTCCGCTTCTTATCCCGGTACCTC
CGGCCCTTTTTCTGGGACGCAGGGACCCGAGCCTTGCAAGCGGGCTTTGC
CCGTTTTGAACTCCTGCTTTTGTACCACGACCCCGAACTCGGCACGCATT
TAAGGCGACACgacttcccccccgccctgtaTCTGACGCCTATGCTTGTG
ACGCTCTTCGCACACAACCTGGAAATGTACCTGGTCCATCGGCTGTGGGA
CAGCTACCTGAGCGTGGACGACCCTGCCTTTGTCTACTttgtcgccctcg
ccctcttcgccaGCAAGCgctacctccttcttccctccATGTTGAGCGCG
CAACTTCGAGCTGAAATCAACAAAACAGACATGGACGTGCCCAAAATCAA
ACAATTTTGTCGTAATCATCCTGTGGGTACCATCGTCGACAACAAAATGC
GCGTCAAAGTGTGGTTAGCGCTTCTCCTGGACGGggagcccccgccgccg
ctaccctccctcccccccacggccctattggtggaagaagacgcaCGCGT
TGTGGACGCCGACGTGAAGCGTACGCGCGGCTACCTGCCCATCTTCCAAC
TCCCGGACACCCAAGACACGGTGCGCAAGCTCCTTAAAACCTACTGTCTG
GCTACCGGCGTCAAATACAAACAGGGCATGCACGAGCTGTTGGCCCCGTT
TGTAGCCCTAAGCCCGgaccctccgtcccccccacTGCCAGTCGAGGCCA
TCTACGCCATGTTTTTCCGCTTCTTATCCCGGTACCTCCGGCCCTTTTTC
TGGGACGCAGGGACCCGAGCCTTGCAAGCGGGCTTTGCCCGTTTTGAACT
CCTGCTTTTGTACCACGACCCCGAACTCGGCACGCATTTAAGGCGACACg
acttcccccccgccctgtaTCTGACGCCTATGCTTGTGACGCTCTTCGCA
CACAACCTGGAAATGTACCTGGTCCATCGGCTGTGGGACAGCTACCTGAG
CGTGGACGACCCTGCCTTTGTCTACTttgtcgccctcgccctcttcgcca
GCAAGCgctacctccttcttccctcc back to top
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