EWM26970.1, cds3704 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26970.1 vs. NCBI_GenBank
Match: gi|585109134|gb|EWM26970.1| (tbc domain-containing protein kinase-like isoform 3, partial [Nannochloropsis gaditana]) HSP 1 Score: 496.893 bits (1278), Expect = 1.149e-177 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0
Query: 1 MLSAQLRAEINKTDMDVPKIKQFCRNHPVGTIVDNKMRVKVWLALLLDGEPPPPLPSLPPTALLVEEDARVVDADVKRTRGYLPIFQLPDTQDTVRKLLKTYCLATGVKYKQGMHELLAPFVALSPDPPSPPLPVEAIYAMFFRFLSRYLRPFFWDAGTRALQAGFARFELLLLYHDPELGTHLRRHDFPPALYLTPMLVTLFAHNLEMYLVHRLWDSYLSVDDPAFVYFVALALFASKRYLLLPS 246
MLSAQLRAEINKTDMDVPKIKQFCRNHPVGTIVDNKMRVKVWLALLLDGEPPPPLPSLPPTALLVEEDARVVDADVKRTRGYLPIFQLPDTQDTVRKLLKTYCLATGVKYKQGMHELLAPFVALSPDPPSPPLPVEAIYAMFFRFLSRYLRPFFWDAGTRALQAGFARFELLLLYHDPELGTHLRRHDFPPALYLTPMLVTLFAHNLEMYLVHRLWDSYLSVDDPAFVYFVALALFASKRYLLLPS
Sbjct: 1 MLSAQLRAEINKTDMDVPKIKQFCRNHPVGTIVDNKMRVKVWLALLLDGEPPPPLPSLPPTALLVEEDARVVDADVKRTRGYLPIFQLPDTQDTVRKLLKTYCLATGVKYKQGMHELLAPFVALSPDPPSPPLPVEAIYAMFFRFLSRYLRPFFWDAGTRALQAGFARFELLLLYHDPELGTHLRRHDFPPALYLTPMLVTLFAHNLEMYLVHRLWDSYLSVDDPAFVYFVALALFASKRYLLLPS 246
BLAST of EWM26970.1 vs. NCBI_GenBank
Match: gi|301121498|ref|XP_002908476.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103507|gb|EEY61559.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 153.295 bits (386), Expect = 1.018e-38 Identity = 101/247 (40.89%), Postives = 137/247 (55.47%), Query Frame = 0
Query: 1 MLSAQLRAEINKTDMDVPKIKQFCRNHPVGTIVDNKMRVKVWLALLLDGEPPPPLPSLPPTALLVEED---ARVVDADVKRTRGYLPIFQLPDTQDTVRKLLKTYCLATGVKYKQGMHELLAPFVALSPD----PPSPPLPVEAIYAMFFRFLSRYLRPFFWDAGTRALQAGFARFELLLLYHDPELGTHLRRHDFPPALYLTPMLVTLFAHNLEMYLVHRLWDSYLSVDDPAFVYFVALALFASKR 240
+L+ QL E+ K D I CR+ +G + N +R +VW LL G P+L + VEED RVV AD RTRG P FQ P+T + V KLL YC ++YKQGM+E+LAPF+ L+ P PL A++ F+ + + L F D R+LQ F + LL+LYHDP L +L +HD P LY+TP +TLFA +L V LWD +L +DP ++FVA AL A+ R
Sbjct: 61 LLTLQLDREMQKRRPDHFVIGVTCRS--LGGVPSN-LRSQVWQELL--GVARTDRPNLDQSIRQVEEDLDNQRVVAADAARTRGNEPRFQQPETVELVVKLLTYYCKRRSIQYKQGMNEVLAPFLLLTEQRDGAPERTPLAEGAVFQCFYALIDKLLPHVFVDKEFRSLQCSFQLYRLLMLYHDPALCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANR 302
BLAST of EWM26970.1 vs. NCBI_GenBank
Match: gi|566033274|gb|ETI56185.1| (hypothetical protein F443_01226 [Phytophthora parasitica P1569]) HSP 1 Score: 152.14 bits (383), Expect = 2.156e-38 Identity = 99/243 (40.74%), Postives = 134/243 (55.14%), Query Frame = 0
Query: 5 QLRAEINKTDMDVPKIKQFCRNHPVGTIVDNKMRVKVWLALLLDGEPPPPLPSLPPTALLVEED---ARVVDADVKRTRGYLPIFQLPDTQDTVRKLLKTYCLATGVKYKQGMHELLAPFVALSPDPPSP----PLPVEAIYAMFFRFLSRYLRPFFWDAGTRALQAGFARFELLLLYHDPELGTHLRRHDFPPALYLTPMLVTLFAHNLEMYLVHRLWDSYLSVDDPAFVYFVALALFASKR 240
QL E+ K D I CR+ +G + N +R +VW LL G SL + L VEED RV+ AD RTRG P F+ P+T + V KLL YC ++YKQGM+E+LAPF+ L+ PL ++ F+ + R+L F D R+LQ F + LL+LYHDPEL +L +HD P LY+TP +TLFA +L V LWD +L +DP ++FVA AL A+ R
Sbjct: 68 QLEREMQKRRPDHFVIGVTCRS--LGGVPSN-LRSQVWQELL--GVARTERLSLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCCSIQYKQGMNEVLAPFLLLTEQRDGAQKRVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANR 305
BLAST of EWM26970.1 vs. NCBI_GenBank
Match: gi|568059083|gb|ETM55667.1| (hypothetical protein L914_01145 [Phytophthora parasitica]) HSP 1 Score: 152.14 bits (383), Expect = 2.284e-38 Identity = 99/243 (40.74%), Postives = 134/243 (55.14%), Query Frame = 0
Query: 5 QLRAEINKTDMDVPKIKQFCRNHPVGTIVDNKMRVKVWLALLLDGEPPPPLPSLPPTALLVEED---ARVVDADVKRTRGYLPIFQLPDTQDTVRKLLKTYCLATGVKYKQGMHELLAPFVALSPDPPSP----PLPVEAIYAMFFRFLSRYLRPFFWDAGTRALQAGFARFELLLLYHDPELGTHLRRHDFPPALYLTPMLVTLFAHNLEMYLVHRLWDSYLSVDDPAFVYFVALALFASKR 240
QL E+ K D I CR+ +G + N +R +VW LL G SL + L VEED RV+ AD RTRG P F+ P+T + V KLL YC ++YKQGM+E+LAPF+ L+ PL ++ F+ + R+L F D R+LQ F + LL+LYHDPEL +L +HD P LY+TP +TLFA +L V LWD +L +DP ++FVA AL A+ R
Sbjct: 68 QLEREMQKRRPDHFVIGVTCRS--LGGVPSN-LRSQVWQELL--GVARTERLSLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCCSIQYKQGMNEVLAPFLLLTEQRDGAQKRVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANR 305
BLAST of EWM26970.1 vs. NCBI_GenBank
Match: gi|970643416|gb|KUF84680.1| (TBC1 domain family member 23 [Phytophthora nicotianae]) HSP 1 Score: 152.14 bits (383), Expect = 2.566e-38 Identity = 99/243 (40.74%), Postives = 134/243 (55.14%), Query Frame = 0
Query: 5 QLRAEINKTDMDVPKIKQFCRNHPVGTIVDNKMRVKVWLALLLDGEPPPPLPSLPPTALLVEED---ARVVDADVKRTRGYLPIFQLPDTQDTVRKLLKTYCLATGVKYKQGMHELLAPFVALSPDPPSP----PLPVEAIYAMFFRFLSRYLRPFFWDAGTRALQAGFARFELLLLYHDPELGTHLRRHDFPPALYLTPMLVTLFAHNLEMYLVHRLWDSYLSVDDPAFVYFVALALFASKR 240
QL E+ K D I CR+ +G + N +R +VW LL G SL + L VEED RV+ AD RTRG P F+ P+T + V KLL YC ++YKQGM+E+LAPF+ L+ PL ++ F+ + R+L F D R+LQ F + LL+LYHDPEL +L +HD P LY+TP +TLFA +L V LWD +L +DP ++FVA AL A+ R
Sbjct: 68 QLEREMQKRRPDHFVIGVTCRS--LGGVPSN-LRSQVWQELL--GVARTERLSLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQRDGAQKRVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANR 305
BLAST of EWM26970.1 vs. NCBI_GenBank
Match: gi|570934446|gb|ETO99702.1| (hypothetical protein F441_22882 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 151.754 bits (382), Expect = 3.229e-38 Identity = 99/243 (40.74%), Postives = 134/243 (55.14%), Query Frame = 0
Query: 5 QLRAEINKTDMDVPKIKQFCRNHPVGTIVDNKMRVKVWLALLLDGEPPPPLPSLPPTALLVEED---ARVVDADVKRTRGYLPIFQLPDTQDTVRKLLKTYCLATGVKYKQGMHELLAPFVALSPDPPSP----PLPVEAIYAMFFRFLSRYLRPFFWDAGTRALQAGFARFELLLLYHDPELGTHLRRHDFPPALYLTPMLVTLFAHNLEMYLVHRLWDSYLSVDDPAFVYFVALALFASKR 240
QL E+ K D I CR+ +G + N +R +VW LL G SL + L VEED RV+ AD RTRG P F+ P+T + V KLL YC ++YKQGM+E+LAPF+ L+ PL ++ F+ + R+L F D R+LQ F + LL+LYHDPEL +L +HD P LY+TP +TLFA +L V LWD +L +DP ++FVA AL A+ R
Sbjct: 68 QLEREMQKRRPDHFVIGVTCRS--LGGVPSN-LRSQVWQELL--GVARTERLSLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQRDGAQKRVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANR 305
BLAST of EWM26970.1 vs. NCBI_GenBank
Match: gi|568028482|gb|ETM02423.1| (hypothetical protein L917_01106 [Phytophthora parasitica]) HSP 1 Score: 151.754 bits (382), Expect = 3.292e-38 Identity = 99/243 (40.74%), Postives = 134/243 (55.14%), Query Frame = 0
Query: 5 QLRAEINKTDMDVPKIKQFCRNHPVGTIVDNKMRVKVWLALLLDGEPPPPLPSLPPTALLVEED---ARVVDADVKRTRGYLPIFQLPDTQDTVRKLLKTYCLATGVKYKQGMHELLAPFVALSPDPPSP----PLPVEAIYAMFFRFLSRYLRPFFWDAGTRALQAGFARFELLLLYHDPELGTHLRRHDFPPALYLTPMLVTLFAHNLEMYLVHRLWDSYLSVDDPAFVYFVALALFASKR 240
QL E+ K D I CR+ +G + N +R +VW LL G SL + L VEED RV+ AD RTRG P F+ P+T + V KLL YC ++YKQGM+E+LAPF+ L+ PL ++ F+ + R+L F D R+LQ F + LL+LYHDPEL +L +HD P LY+TP +TLFA +L V LWD +L +DP ++FVA AL A+ R
Sbjct: 68 QLEREMQKRRPDHFVIGVTCRS--LGGVPSN-LRSQVWQELL--GVARTERLSLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQRDGAQKRVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANR 305
BLAST of EWM26970.1 vs. NCBI_GenBank
Match: gi|567999321|gb|ETL49362.1| (hypothetical protein L916_01136 [Phytophthora parasitica]) HSP 1 Score: 151.754 bits (382), Expect = 3.389e-38 Identity = 99/243 (40.74%), Postives = 134/243 (55.14%), Query Frame = 0
Query: 5 QLRAEINKTDMDVPKIKQFCRNHPVGTIVDNKMRVKVWLALLLDGEPPPPLPSLPPTALLVEED---ARVVDADVKRTRGYLPIFQLPDTQDTVRKLLKTYCLATGVKYKQGMHELLAPFVALSPDPPSP----PLPVEAIYAMFFRFLSRYLRPFFWDAGTRALQAGFARFELLLLYHDPELGTHLRRHDFPPALYLTPMLVTLFAHNLEMYLVHRLWDSYLSVDDPAFVYFVALALFASKR 240
QL E+ K D I CR+ +G + N +R +VW LL G SL + L VEED RV+ AD RTRG P F+ P+T + V KLL YC ++YKQGM+E+LAPF+ L+ PL ++ F+ + R+L F D R+LQ F + LL+LYHDPEL +L +HD P LY+TP +TLFA +L V LWD +L +DP ++FVA AL A+ R
Sbjct: 68 QLEREMQKRRPDHFVIGVTCRS--LGGVPSN-LRSQVWQELL--GVARTERLSLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQRDGAQKRVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANR 305
BLAST of EWM26970.1 vs. NCBI_GenBank
Match: gi|570336975|gb|ETO84923.1| (hypothetical protein F444_01225 [Phytophthora parasitica P1976]) HSP 1 Score: 151.754 bits (382), Expect = 3.421e-38 Identity = 99/243 (40.74%), Postives = 134/243 (55.14%), Query Frame = 0
Query: 5 QLRAEINKTDMDVPKIKQFCRNHPVGTIVDNKMRVKVWLALLLDGEPPPPLPSLPPTALLVEED---ARVVDADVKRTRGYLPIFQLPDTQDTVRKLLKTYCLATGVKYKQGMHELLAPFVALSPDPPSP----PLPVEAIYAMFFRFLSRYLRPFFWDAGTRALQAGFARFELLLLYHDPELGTHLRRHDFPPALYLTPMLVTLFAHNLEMYLVHRLWDSYLSVDDPAFVYFVALALFASKR 240
QL E+ K D I CR+ +G + N +R +VW LL G SL + L VEED RV+ AD RTRG P F+ P+T + V KLL YC ++YKQGM+E+LAPF+ L+ PL ++ F+ + R+L F D R+LQ F + LL+LYHDPEL +L +HD P LY+TP +TLFA +L V LWD +L +DP ++FVA AL A+ R
Sbjct: 68 QLEREMQKRRPDHFVIGVTCRS--LGGVPSN-LRSQVWQELL--GVARTERLSLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQRDGAQKRVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANR 305
BLAST of EWM26970.1 vs. NCBI_GenBank
Match: gi|570997672|gb|ETP54000.1| (hypothetical protein F442_01160 [Phytophthora parasitica P10297]) HSP 1 Score: 151.754 bits (382), Expect = 3.454e-38 Identity = 99/243 (40.74%), Postives = 134/243 (55.14%), Query Frame = 0
Query: 5 QLRAEINKTDMDVPKIKQFCRNHPVGTIVDNKMRVKVWLALLLDGEPPPPLPSLPPTALLVEED---ARVVDADVKRTRGYLPIFQLPDTQDTVRKLLKTYCLATGVKYKQGMHELLAPFVALSPDPPSP----PLPVEAIYAMFFRFLSRYLRPFFWDAGTRALQAGFARFELLLLYHDPELGTHLRRHDFPPALYLTPMLVTLFAHNLEMYLVHRLWDSYLSVDDPAFVYFVALALFASKR 240
QL E+ K D I CR+ +G + N +R +VW LL G SL + L VEED RV+ AD RTRG P F+ P+T + V KLL YC ++YKQGM+E+LAPF+ L+ PL ++ F+ + R+L F D R+LQ F + LL+LYHDPEL +L +HD P LY+TP +TLFA +L V LWD +L +DP ++FVA AL A+ R
Sbjct: 68 QLEREMQKRRPDHFVIGVTCRS--LGGVPSN-LRSQVWQELL--GVARTERLSLDQSILQVEEDLDNQRVIAADAARTRGNEPRFKQPETVELVVKLLTYYCKCRSIQYKQGMNEVLAPFLLLTEQRDGAQKRVPLAEGVVFQCFYALIDRFLPHVFVDKEFRSLQCSFQLYRLLMLYHDPELCHYLDQHDMTPELYVTPWFMTLFARSLPPEFVFYLWDFFLLEEDPYLLHFVAYALVAANR 305 The following BLAST results are available for this feature:
BLAST of EWM26970.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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