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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100127g14.6206.mrna |
| Orig protein id | gnl|cribi|Naga_100127g14.6206 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:1013986..1017260 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3703 ID=rna3703|Name=rna3703|organism=Nannochloropsis gaditana|type=mRNA|length=1324bp
CCAAACCAGACGTGGTGCCCCAAATCTCCCGCGTGCACCATATGAACTTC
GTACATGGAGCGACCGGATTCGTGAGACGGCCCGGCCACACGTCATGTAG
ATAGGAGAATGGACCACGGAACGGCACGGATGGCCACGTGTATTTATCCG
CGGAGATTTAACCTTGTTCTTCCTTTCTCATTGGCCTTCCGCTCGCTGAG
GACACAGCGAGCGGAGGGGATGCCGAGCAATTCAATTCCCCGTGGTGCTG
GCTATGTGAAGACAACTTAGAGAATCATGTGGGCAGCGTCACTCTTACGA
TTGTGTGGAGGCAAGGCGGTGTCAGAGAACCCGGACGGTGCGCCAAACAG
TGGCATTAAACGTATATCATGTCTGCCGCCAGCCTAACACCTCGAAAGCC
TGATGCTTTCTTCGCGCCTTATTCCTACAAGTGGTATTCATGTCTTAGAG
CAAGATAAAAGCGATTGGCTTCTCGATCATCACAACAAAATGCGCTTTGA
AGACACTGTCTAGGTATGGAGCAGGGTCGGCGCGAGGGCAGCGTCAAGAG
GGAACCAAAGTGGCAGCATAATGTGCCCTTAACGTACATAGATCGGGTCG
CCTTCTCATGGTTTGTGCTCGACGCCATCACGCATCTCTCCATCGAACTT
GGCTACGTGCTCCTCGCATTGGGTCCCACTGCGCGTGCCTCGCCCTCCTT
CATGGGGTTCCTCTGGCGTGAGTACGCGCGAGCAGACAGTCGGTGGGCCG
GGCGAGATCCCAATATCATCGCCATCGAATTGGTCACTGTTTTCCTCCTG
GGCCCCGCCTGCCTGCTTGCCGCATGGGCCATCTATCATCGACGTCCTTA
CCGCCACGTCCTTCAACTTGGCATCTCTCTTCTTGAGCTGTACGGCGGGT
GGATGACTTTTGCACCCGATGTGCTGGCAGGTGCGCCGTCTCTGGCTCTT
CAGGATCCCTTCCTCCTCTCGGTGCATTTGATCTTTATGAATGGCCTGTG
GGTCCTCGTCCCCGCCGTCCTTGCATGGGAAAGCGGGGCCACACTCGTTG
GGGCCTGCTCCCTGGCCAAAGTTGGAGCGAGCGGAGGGAAAGAAGGAGGG
AGCAAGAGGGAGGAGAGGGGGCAGGCCCCGGGGATACCTTCGGTCCATTG
GTTCTGGGTGCTGGCAATGGCGATGGTTGTCTACGTGATTTTAGTGCCGC
TGATCCTGGTAGCTACAGCTGCTCCTCCTCCTGTAGAAGCGAGTGGTCGA
GTGGTTGAACTTTAAGCTTCGGCAAGAGCGAGCGCGGGCGTGAGATTGCA
AAGAACAAAGTACTCGATGAAACC back to topprotein sequence of rna3703 >rna3703-protein ID=rna3703-protein|Name=rna3703|organism=Nannochloropsis gaditana|type=polypeptide|length=550bp
MCTNELMTGFVEAPTAMCSGSHFSAKAPVGGNELKDLQCDAQSMCKPCFL
TRDASVNTAASITDDDEDEDDEGCACTLERGGASMTRSLLEDDAATLFGL
GGCLDLLANSKHRLGARLTSRTGCEVVEKDSTTLPAWAPLPAPPPQLWRQ
RSAQEIRKHYAVKLGIRTMGTGHLVAGLKASQWRTSCLPEGVRPVIEKLK
GQPESYGGFLRLMRRQTLVGKGQQAPTEGSAPTAYPTSHESRSSLSSTDD
RAPACAACLALPSDRAPKQRALPVPVPGRASVDGAIQLRPAMDYVGGSGG
DDESDGCGSFSSSEASGYLSCSSCSRTSPSFPLPAFQYPLGTGAPHNIRD
GRRVGGLKREPKLAVPQVSHSAGESGTGKALPSPSSLPPSSFPSPSTSSF
AMRCLMDAANSPAASTSVGAMSLTPASCSFLSRASSPPHAHTDRQASRLA
VSPAPLSRRRIAFHEDVCVVHIPSHTEYSRRIKSQYWTSPAEIYEMACRN
LVEFEAEGYSWEAALEEEHLYWCPDTASFVHPAHIMMEGQEDWREGRREG back to topmRNA from alignment at CM002461.1:1013986..1017260+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3703 ID=rna3703|Name=rna3703|organism=Nannochloropsis gaditana|type=mRNA|length=3275bp|location=Sequence derived from alignment at CM002461.1:1013986..1017260+ (Nannochloropsis gaditana)
TGCATGTACCGTGTTGTTGCGCTCTTCGGTCAAGGCAGGGGACGACGAGC
TTAACTGGCGCACCCCGTGACGAGAGCAGGGGGTGGAGTGGGCGAATACT
ACAACACACCGCCATCAACACCTTCAGAAGCTGAGCAAATCAAGCGGTAA
TCAGAGAGAAGCTTTCGCATCGCTTGTCATGTGCACAAACGAGCTCATGA
CGGGATTTGTGGAGGCGCCTACAGCAATGTGTTCCGGCAGTCACTTTTCG
GCCAAGGCGCCGGTTGGCGGCAACGAGCTCAAGGACCTCCAGTGCGACGC
CCAGAGCATGTGCAAACCCTGTTTTTTGACTCGAGATGCGTCTGTCAATA
CCGCCGCGTCCATCacggacgacgacgaggacgaggatgacgagggctGT
GCATGTACTTTGGAACGGGGCGGGGCCTCCATGACCCGGAGCttgctgga
ggacgacgcggcTACCCTTTTCGGATTAGGCGGTTGCCTGGACCTGCTCG
CGAATTCCAAGCATCGTCTCGGAGCCAGACTGACTTCCAGGACAGGTTGT
GAAGTAGTGGAAAAGGACAGCACGACGCTGCCTGCGtgggcccctcttcc
cgcgccaccgccacAGCTTTGGCGACAGCGCTCAGCGCAAGAAATTCGCA
AGCACTACGCGGTCAAGCTGGGCATTCGGACAATGGGCACAGGCCATCTC
GTGGCCGGGCTAAAAGCTTCGCAATGGCGAACGTCCTGTCTGCCCGAAGG
CGTCCGTCCGGTGATCGAAAAATTGAAAGGCCAGCCCGAGTCCTACGGAG
GATTCCTCCGCCTGATGCGGAGACAAACCTtggtgggaaaagggcagCAG
GCACCAACGGAGGGAAGTGCACCGACTGCTTACCCAACCTCCCACGAGTC
GCGGTCTTCGCTTTCCTCGACAGACGACCGGGCGCCTGCCTGTGCcgcct
gccttgccctcccctcggacCGTGCGCCCAAACAGCGGGCTTTACCCGTG
CCTGTTCCTGGACGCGCCAGCGTGGACGGCGCGATCCAACTCCGGCCTGC
GATGGACTatgtgggaggaagcggcggggaCGACGAGAGCGACGGCTGcg
gttccttctcctcctcggaggcGTCGGGCTACCTGAGCTGCAGCTCCTGC
TCTCGAACcagcccttcttttcccctacCCGCGTTCCAGTACCCCTTGGG
GACTGGGGCGCCGCACAATATACGCGATGGGAGGCGGGTTGGCGGCTTGA
AGCGCGAGCCCAAGCTTGCAGTACCCCAGGTGAGCCACAGCGCGGGCGAG
TCTGGGACGGGCAAGGCCCttccgtccccgtcctccctccctccctcctc
cttcccctccccctcgacctcgtctTTTGCGATGCGGTGCCTGATGGACG
CGGCGAACAGCcccgcggcctccaccagcgttGGGGCCATGAGCCTcacg
cctgcctcctgttccttcttgtcccgggcttcctccccgccccatgCCCA
CACCGACCGGCAGGCCAGCCGCCTGGCCgtgtcccccgcccctctttctc
gacgTCGGATTGCCTTCCACGAAGACGTCTGCGTGGTCCACATTCCTTCC
CATACCGGTGCGTCGGCTGGGCTCCTAAgaaaccctaaccctaagCCTAA
CCCTCCCTTTTGTCGGCCGctcacctcttccctccttactaccctttctc
tcccgttTTCGACAGAGTACAGCCGGCGCATCAAGTCGCAGTACTGGACC
AGCCCGGCCGAAATCTACGAGATGGCGTGTCGGAACCTGGTAGAATTCGA
GGCGGAAGGGTACTCGTGGGAGGCAgctttggaagaggagcaccTGTACT
GGTGCCCAGACACGGCCAGTTTTGTGCACCCGGCCCATATTATGatggaa
gggcaagaggattggagggagggaagaagggagggttgaaGCCTGGATat
gggagggaagtgacGCTGGCGGGAGGgtaggcgggagggagaggaagtgg
gaagAAGTAAGGCATGTGGACGATGTGTGTTTTGAAAGTAAGATTTAAAT
TGAAGCGGCGCTGGGCGCAAAACAACAACGCCAGCCATGGCAGTAAATGT
AGCACGTAAAACAGTCAGCATGGTCGCAGCGAGAGTCATGAATGCGAGCC
CGCGCTGAAGAGTATTGCATCATGTGAGACGATCACTTTCGACCCAGCGT
CTGATCAGACTGCCCTCCGCAAGGTGGGGAGAAAATTATCGTGAGAGCAA
CGACTGCATAGCAGGCCTCTGAGAAGGGGGCGGCACAAACGAAAGGAAAG
TACCTGAATGGATTGAAACCATTGCATAATGCAGGGGAacgcgaaggggg
aggtaaAAGACCTTGAGGGGCAGGTGCGGGGGGGTTATGGCGGGCACTGA
AGGCAAAAGGCAAGACATTGGGGATGTAGGAACGGAAGAGTTGGGAGGGT
TTGTTAATTGCGGGTATGATGACATGGCATGTCTAAGCCGCGTTGAAGTT
CGAGGAAGGTAAAGCCGGGCGTGTAGTCGGCCGGACGCTGATGGCGGCAT
ACGCCTGGGCGGTGCGCCTGACTTGATGGGGCCGGAAGGTCCGTGAGACA
GCTGGAAAGGGGTGGATGGAAGGAGTataagaaaaaggagggagggtatc
GTGGGATCCTGCGCTTGCTTGTGCTCGGAGTGTATCTGTAGACACGTAAC
GCATGTAAAATCGTGGTTTATTTTTAAATTAGTGGACTGGAGGCTGCTTT
AGGCATACAACgagtgaagaggaaggtggatgGTAGGCGGGATGCAATTT
GCCGGGGTCGCTCTTTTTGCCTCTGTATGCATGTGCATATTATGATAATC
ATGTCATCTGTTGAGGGACGTTTTTTGCAATTGGTTGGCCGTTGAGACAA
AGACTGGTGGACTGGAATATTTGAAACAAAGTTGCTGCTGAGTCGACTGA
AAATGTACGGGGGGAAAGCCTGATCCGATTTTCGAGTGATTGAATTGAAT
GGCTGTAAATGTCCGGAGGGAGTGACCCTGgcattgggagggaagacctA
AAGGTGAACAGTTTTGTTAAAGGCTTTtgtgggaagagagaaaggaaggc
ataGGACAGGAAGGCAATAATTACTGATTCGATTTGTGCATGCAAATAAT
AAACGAAAGGGGGGCTAGAGTCCCCGACAAGCGAGTATAAGTGGCTGTCG
ACACGGTCGTGgtccgcatcctccccaaAAGGAAACTCCATCTATCCATC
ATCTCGGACGTGGTGGATATTCCAC back to topCoding sequence (CDS) from alignment at CM002461.1:1013986..1017260+ >rna3703 ID=rna3703|Name=rna3703|organism=Nannochloropsis gaditana|type=CDS|length=3306bp|location=Sequence derived from alignment at CM002461.1:1013986..1017260+ (Nannochloropsis gaditana)
ATGTGCACAAACGAGCTCATGACGGGATTTGTGGAGGCGCCTACAGCAAT
GTGTTCCGGCAGTCACTTTTCGGCCAAGGCGCCGGTTGGCGGCAACGAGC
TCAAGGACCTCCAGTGCGACGCCCAGAGCATGTGCAAACCCTGTTTTTTG
ACTCGAGATGCGTCTGTCAATACCGCCGCGTCCATCacggacgacgacga
ggacgaggatgacgagggctGTGCATGTACTTTGGAACGGGGCGGGGCCT
CCATGACCCGGAGCttgctggaggacgacgcggcTACCCTTTTCGGATTA
GGCGGTTGCCTGGACCTGCTCGCGAATTCCAAGCATCGTCTCGGAGCCAG
ACTGACTTCCAGGACAGGTTGTGAAGTAGTGGAAAAGGACAGCACGACGC
TGCCTGCGtgggcccctcttcccgcgccaccgccacAGCTTTGGCGACAG
CGCTCAGCGCAAGAAATTCGCAAGCACTACGCGGTCAAGCTGGGCATTCG
GACAATGGGCACAGGCCATCTCGTGGCCGGGCTAAAAGCTTCGCAATGGC
GAACGTCCTGTCTGCCCGAAGGCGTCCGTCCGGTGATCGAAAAATTGAAA
GGCCAGCCCGAGTCCTACGGAGGATTCCTCCGCCTGATGCGGAGACAAAC
CTtggtgggaaaagggcagCAGGCACCAACGGAGGGAAGTGCACCGACTG
CTTACCCAACCTCCCACGAGTCGCGGTCTTCGCTTTCCTCGACAGACGAC
CGGGCGCCTGCCTGTGCcgcctgccttgccctcccctcggacCGTGCGCC
CAAACAGCGGGCTTTACCCGTGCCTGTTCCTGGACGCGCCAGCGTGGACG
GCGCGATCCAACTCCGGCCTGCGATGGACTatgtgggaggaagcggcggg
gaCGACGAGAGCGACGGCTGcggttccttctcctcctcggaggcGTCGGG
CTACCTGAGCTGCAGCTCCTGCTCTCGAACcagcccttcttttcccctac
CCGCGTTCCAGTACCCCTTGGGGACTGGGGCGCCGCACAATATACGCGAT
GGGAGGCGGGTTGGCGGCTTGAAGCGCGAGCCCAAGCTTGCAGTACCCCA
GGTGAGCCACAGCGCGGGCGAGTCTGGGACGGGCAAGGCCCttccgtccc
cgtcctccctccctccctcctccttcccctccccctcgacctcgtctTTT
GCGATGCGGTGCCTGATGGACGCGGCGAACAGCcccgcggcctccaccag
cgttGGGGCCATGAGCCTcacgcctgcctcctgttccttcttgtcccggg
cttcctccccgccccatgCCCACACCGACCGGCAGGCCAGCCGCCTGGCC
gtgtcccccgcccctctttctcgacgTCGGATTGCCTTCCACGAAGACGT
CTGCGTGGTCCACATTCCTTCCCATACCGAGTACAGCCGGCGCATCAAGT
CGCAGTACTGGACCAGCCCGGCCGAAATCTACGAGATGGCGTGTCGGAAC
CTGGTAGAATTCGAGGCGGAAGGGTACTCGTGGGAGGCAgctttggaaga
ggagcaccTGTACTGGTGCCCAGACACGGCCAGTTTTGTGCACCCGGCCC
ATATTATGatggaagggcaagaggattggagggagggaagaagggagggt
tgaATGTGCACAAACGAGCTCATGACGGGATTTGTGGAGGCGCCTACAGC
AATGTGTTCCGGCAGTCACTTTTCGGCCAAGGCGCCGGTTGGCGGCAACG
AGCTCAAGGACCTCCAGTGCGACGCCCAGAGCATGTGCAAACCCTGTTTT
TTGACTCGAGATGCGTCTGTCAATACCGCCGCGTCCATCacggacgacga
cgaggacgaggatgacgagggctGTGCATGTACTTTGGAACGGGGCGGGG
CCTCCATGACCCGGAGCttgctggaggacgacgcggcTACCCTTTTCGGA
TTAGGCGGTTGCCTGGACCTGCTCGCGAATTCCAAGCATCGTCTCGGAGC
CAGACTGACTTCCAGGACAGGTTGTGAAGTAGTGGAAAAGGACAGCACGA
CGCTGCCTGCGtgggcccctcttcccgcgccaccgccacAGCTTTGGCGA
CAGCGCTCAGCGCAAGAAATTCGCAAGCACTACGCGGTCAAGCTGGGCAT
TCGGACAATGGGCACAGGCCATCTCGTGGCCGGGCTAAAAGCTTCGCAAT
GGCGAACGTCCTGTCTGCCCGAAGGCGTCCGTCCGGTGATCGAAAAATTG
AAAGGCCAGCCCGAGTCCTACGGAGGATTCCTCCGCCTGATGCGGAGACA
AACCTtggtgggaaaagggcagCAGGCACCAACGGAGGGAAGTGCACCGA
CTGCTTACCCAACCTCCCACGAGTCGCGGTCTTCGCTTTCCTCGACAGAC
GACCGGGCGCCTGCCTGTGCcgcctgccttgccctcccctcggacCGTGC
GCCCAAACAGCGGGCTTTACCCGTGCCTGTTCCTGGACGCGCCAGCGTGG
ACGGCGCGATCCAACTCCGGCCTGCGATGGACTatgtgggaggaagcggc
ggggaCGACGAGAGCGACGGCTGcggttccttctcctcctcggaggcGTC
GGGCTACCTGAGCTGCAGCTCCTGCTCTCGAACcagcccttcttttcccc
tacCCGCGTTCCAGTACCCCTTGGGGACTGGGGCGCCGCACAATATACGC
GATGGGAGGCGGGTTGGCGGCTTGAAGCGCGAGCCCAAGCTTGCAGTACC
CCAGGTGAGCCACAGCGCGGGCGAGTCTGGGACGGGCAAGGCCCttccgt
ccccgtcctccctccctccctcctccttcccctccccctcgacctcgtct
TTTGCGATGCGGTGCCTGATGGACGCGGCGAACAGCcccgcggcctccac
cagcgttGGGGCCATGAGCCTcacgcctgcctcctgttccttcttgtccc
gggcttcctccccgccccatgCCCACACCGACCGGCAGGCCAGCCGCCTG
GCCgtgtcccccgcccctctttctcgacgTCGGATTGCCTTCCACGAAGA
CGTCTGCGTGGTCCACATTCCTTCCCATACCGAGTACAGCCGGCGCATCA
AGTCGCAGTACTGGACCAGCCCGGCCGAAATCTACGAGATGGCGTGTCGG
AACCTGGTAGAATTCGAGGCGGAAGGGTACTCGTGGGAGGCAgctttgga
agaggagcaccTGTACTGGTGCCCAGACACGGCCAGTTTTGTGCACCCGG
CCCATATTATGatggaagggcaagaggattggagggagggaagaagggag
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