EWM26974.1, cds3694 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26974.1 vs. NCBI_GenBank
Match: gi|585109141|gb|EWM26974.1| (hypothetical protein Naga_100127g14 [Nannochloropsis gaditana]) HSP 1 Score: 1123.61 bits (2905), Expect = 0.000e+0 Identity = 550/550 (100.00%), Postives = 550/550 (100.00%), Query Frame = 0
Query: 1 MCTNELMTGFVEAPTAMCSGSHFSAKAPVGGNELKDLQCDAQSMCKPCFLTRDASVNTAASITDDDEDEDDEGCACTLERGGASMTRSLLEDDAATLFGLGGCLDLLANSKHRLGARLTSRTGCEVVEKDSTTLPAWAPLPAPPPQLWRQRSAQEIRKHYAVKLGIRTMGTGHLVAGLKASQWRTSCLPEGVRPVIEKLKGQPESYGGFLRLMRRQTLVGKGQQAPTEGSAPTAYPTSHESRSSLSSTDDRAPACAACLALPSDRAPKQRALPVPVPGRASVDGAIQLRPAMDYVGGSGGDDESDGCGSFSSSEASGYLSCSSCSRTSPSFPLPAFQYPLGTGAPHNIRDGRRVGGLKREPKLAVPQVSHSAGESGTGKALPSPSSLPPSSFPSPSTSSFAMRCLMDAANSPAASTSVGAMSLTPASCSFLSRASSPPHAHTDRQASRLAVSPAPLSRRRIAFHEDVCVVHIPSHTEYSRRIKSQYWTSPAEIYEMACRNLVEFEAEGYSWEAALEEEHLYWCPDTASFVHPAHIMMEGQEDWREGRREG 550
MCTNELMTGFVEAPTAMCSGSHFSAKAPVGGNELKDLQCDAQSMCKPCFLTRDASVNTAASITDDDEDEDDEGCACTLERGGASMTRSLLEDDAATLFGLGGCLDLLANSKHRLGARLTSRTGCEVVEKDSTTLPAWAPLPAPPPQLWRQRSAQEIRKHYAVKLGIRTMGTGHLVAGLKASQWRTSCLPEGVRPVIEKLKGQPESYGGFLRLMRRQTLVGKGQQAPTEGSAPTAYPTSHESRSSLSSTDDRAPACAACLALPSDRAPKQRALPVPVPGRASVDGAIQLRPAMDYVGGSGGDDESDGCGSFSSSEASGYLSCSSCSRTSPSFPLPAFQYPLGTGAPHNIRDGRRVGGLKREPKLAVPQVSHSAGESGTGKALPSPSSLPPSSFPSPSTSSFAMRCLMDAANSPAASTSVGAMSLTPASCSFLSRASSPPHAHTDRQASRLAVSPAPLSRRRIAFHEDVCVVHIPSHTEYSRRIKSQYWTSPAEIYEMACRNLVEFEAEGYSWEAALEEEHLYWCPDTASFVHPAHIMMEGQEDWREGRREG
Sbjct: 1 MCTNELMTGFVEAPTAMCSGSHFSAKAPVGGNELKDLQCDAQSMCKPCFLTRDASVNTAASITDDDEDEDDEGCACTLERGGASMTRSLLEDDAATLFGLGGCLDLLANSKHRLGARLTSRTGCEVVEKDSTTLPAWAPLPAPPPQLWRQRSAQEIRKHYAVKLGIRTMGTGHLVAGLKASQWRTSCLPEGVRPVIEKLKGQPESYGGFLRLMRRQTLVGKGQQAPTEGSAPTAYPTSHESRSSLSSTDDRAPACAACLALPSDRAPKQRALPVPVPGRASVDGAIQLRPAMDYVGGSGGDDESDGCGSFSSSEASGYLSCSSCSRTSPSFPLPAFQYPLGTGAPHNIRDGRRVGGLKREPKLAVPQVSHSAGESGTGKALPSPSSLPPSSFPSPSTSSFAMRCLMDAANSPAASTSVGAMSLTPASCSFLSRASSPPHAHTDRQASRLAVSPAPLSRRRIAFHEDVCVVHIPSHTEYSRRIKSQYWTSPAEIYEMACRNLVEFEAEGYSWEAALEEEHLYWCPDTASFVHPAHIMMEGQEDWREGRREG 550
BLAST of EWM26974.1 vs. NCBI_GenBank
Match: gi|299470113|emb|CBN78142.1| (hypothetical protein Esi_0100_0046 [Ectocarpus siliculosus]) HSP 1 Score: 96.6709 bits (239), Expect = 1.753e-17 Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 0
Query: 454 APLSRRRIAFHEDVCVVHIPSHTEYSRRIKSQYWTSPAEIYEMACRNLVEFEAEGYSWEAALEEEHLYWCPDTASFVHPAHIMMEGQEDWRE 545
AP + + F V V++P H+EYS R++ YW S EI EM RN++EF+AE Y+WE EEE +Y+C +T F+HP I + QE+ RE
Sbjct: 471 APCRHKHVDFAPVVSAVYVPVHSEYSDRVRRSYWNSAGEIREMVYRNMIEFDAEEYNWENVAEEEDMYFCEETGEFIHP--IFFDSQEEARE 560
BLAST of EWM26974.1 vs. NCBI_GenBank
Match: gi|224000513|ref|XP_002289929.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220975137|gb|EED93466.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 85.8853 bits (211), Expect = 1.229e-14 Identity = 41/93 (44.09%), Postives = 56/93 (60.22%), Query Frame = 0
Query: 458 RRRIAFHEDVCVVHIPSHTEYSRRIKSQYWTSPAEIYEMACRNLVEFEAEGYSWEAALEEE-HLYWCPDTASFVHPAHIMM-----EGQEDWR 544
RRR+ F +DV VV IP +EYS RIK + +++ E+ E A RN+VEFEAEG+ L++E Y CP T +HP H+ EG +D R
Sbjct: 250 RRRLVFSDDVVVVPIPMRSEYSNRIKERMYSNRVELSENAQRNVVEFEAEGWDASTVLDDEGQFYKCPLTGELIHPVHLAYFKGAGEGGDDQR 342
BLAST of EWM26974.1 vs. NCBI_GenBank
Match: gi|1210519255|dbj|GAX21839.1| (hypothetical protein FisN_30Hh039 [Fistulifera solaris]) HSP 1 Score: 79.337 bits (194), Expect = 9.565e-14 Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 0
Query: 452 SPAPLSRRRIAFHEDVCVVHIPSHTEYSRRIKSQYWTSPAEIYEMACRNLVEFEAEGYSWEAALEEEHLYWCPDTASFVHPAH 534
SP R + F+E V V+ IP EYSR+++S+ W++ E+ + A RN+VEF AEG++W +E+E +Y C + +HP H
Sbjct: 64 SPKRRKRHSLQFNESVTVMAIPMRNEYSRQVRSKLWSNRLELQQNAARNVVEFAAEGWNWRTVVEDERMYVCAFSGQRIHPCH 146
BLAST of EWM26974.1 vs. NCBI_GenBank
Match: gi|1210521389|dbj|GAX19846.1| (hypothetical protein FisN_11Lh280 [Fistulifera solaris]) HSP 1 Score: 79.7221 bits (195), Expect = 1.468e-13 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 0
Query: 459 RRIAFHEDVCVVHIPSHTEYSRRIKSQYWTSPAEIYEMACRNLVEFEAEGYSWEAALEEEHLYWCPDTASFVHPAHIMMEGQED 542
R+IAF ++V VV IP+ EYS RIKS+ W++ E+ E A RN +EF AEG+ W E++ ++ C + VHP H+ QE+
Sbjct: 101 RKIAFQDEVDVVPIPTRYEYSDRIKSRIWSNRHELQENAERNALEFAAEGWDWRTVTEDDGMFICSVSGELVHPIHLQHLVQEE 184
BLAST of EWM26974.1 vs. NCBI_GenBank
Match: gi|1210526556|dbj|GAX14737.1| (hypothetical protein FisN_11Hh280 [Fistulifera solaris]) HSP 1 Score: 79.7221 bits (195), Expect = 1.558e-13 Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 0
Query: 459 RRIAFHEDVCVVHIPSHTEYSRRIKSQYWTSPAEIYEMACRNLVEFEAEGYSWEAALEEEHLYWCPDTASFVHPAHIMMEGQED 542
R+IAF ++V VV IP+ EYS RIKS+ W++ E+ E A RN +EF AEG+ W E++ ++ C + VHP H+ QE+
Sbjct: 102 RKIAFQDEVDVVPIPTRYEYSDRIKSRIWSNRHELQENAERNALEFAAEGWDWRTVTEDDGMFICSVSGELVHPIHLQHLVQEE 185
BLAST of EWM26974.1 vs. NCBI_GenBank
Match: gi|219117293|ref|XP_002179441.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409332|gb|EEC49264.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 77.0258 bits (188), Expect = 1.443e-12 Identity = 39/101 (38.61%), Postives = 58/101 (57.43%), Query Frame = 0
Query: 435 SSPPHAHTDRQASRLAVSPAPLSRRRIAFHEDVCVVHIPSHTEYSRRIKSQYWTSPAEIYEMACRNLVEFEAEGYSWEAALEEEHLYWCPDTASFVHPAHI 535
S P AHT R++ ++I F ++V V+ IP+ EYS RIKS+ W++ E+ E A RN +EF AEG++W E+E +Y C + VHP H+
Sbjct: 85 SDSPMAHTRRKS------------QKIVFVDEVEVLPIPTRYEYSDRIKSRIWSNRYELQENAERNALEFAAEGWNWRNVTEDEGMYICSVSGELVHPIHL 173
BLAST of EWM26974.1 vs. NCBI_GenBank
Match: gi|224002759|ref|XP_002291051.1| (hypothetical protein THAPSDRAFT_269066 [Thalassiosira pseudonana CCMP1335] >gi|220972827|gb|EED91158.1| hypothetical protein THAPSDRAFT_269066 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 77.7962 bits (190), Expect = 4.797e-12 Identity = 30/79 (37.97%), Postives = 51/79 (64.56%), Query Frame = 0
Query: 457 SRRRIAFHEDVCVVHIPSHTEYSRRIKSQYWTSPAEIYEMACRNLVEFEAEGYSWEAALEEEHLYWCPDTASFVHPAHI 535
S+RR++ H DV V+ IP+ TEY ++ + W+S E+Y+ A RN +EF +EG++W ++EH+ P + +HP H+
Sbjct: 205 SKRRVSLHSDVAVLPIPARTEYPILVRQRLWSSATELYQNAARNSLEFASEGWNWRTVTDDEHMILAP-SGERIHPVHL 282
BLAST of EWM26974.1 vs. NCBI_GenBank
Match: gi|397623827|gb|EJK67162.1| (hypothetical protein THAOC_11846 [Thalassiosira oceanica]) HSP 1 Score: 76.6406 bits (187), Expect = 1.538e-11 Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 0
Query: 458 RRRIAFHEDVCVVHIPSHTEYSRRIKSQYWTSPAEIYEMACRNLVEFEAEGYSWEAALEEEH-LYWCPDTASFVHPAHI 535
RRR+ ++V VV IP +EYS RIK + ++ E+ E A RN+VEFEAEG+ L++E+ Y CP T +HP H+
Sbjct: 241 RRRLNISDEVQVVPIPMRSEYSSRIKERMYSGRVELSENAQRNVVEFEAEGWDASTVLDDENQFYKCPLTGELIHPVHL 319
BLAST of EWM26974.1 vs. NCBI_GenBank
Match: gi|1210527468|dbj|GAX13753.1| (hypothetical protein FisN_30Lh039 [Fistulifera solaris]) HSP 1 Score: 72.7886 bits (177), Expect = 1.800e-11 Identity = 29/77 (37.66%), Postives = 49/77 (63.64%), Query Frame = 0
Query: 458 RRRIAFHEDVCVVHIPSHTEYSRRIKSQYWTSPAEIYEMACRNLVEFEAEGYSWEAALEEEHLYWCPDTASFVHPAH 534
R+ + F+E V VV IP EY R+++S+ W++ E+ + RN+VEF AEG++W +E+E ++ C + +HP H
Sbjct: 66 RQSLQFNETVTVVAIPMRNEYCRQVRSKLWSNRLELQQNIARNVVEFAAEGWNWRTVVEDERMHVCAFSGQRIHPIH 142 The following BLAST results are available for this feature:
BLAST of EWM26974.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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