rna3699, rna3699 (mRNA) Nannochloropsis gaditana

Overview
Namerna3699
Unique Namerna3699
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1726
Alignment locationCM002461.1:1005615..1007049 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100127g10.6215.mrna
Orig protein idgnl|cribi|Naga_100127g10.6215
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1005615..1007049 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100127g10gene3563Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3699rna3699-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26983.1cds3690Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3699 ID=rna3699|Name=rna3699|organism=Nannochloropsis gaditana|type=mRNA|length=1726bp
TAAATGAACAATACACCAGGTAGAGACGAGCATGACGGCGCCTGCGTCAA
TGGAAGTTTCGGGTGGCGTGGAGGAAAGCAAGACAGCGACAGAGCCCAAG
CCCTCTGCCCCCACGAACGTCAACGCGGCAATGGAGGAAGAAGAAAGCCT
CCCCGACCCTTTGAAAGAGGCCTTGGAAGCCGCCGAGGAGCTCGCGCAGT
CGCACCCGTCAAAAGCCATCACTGCCTTCCACGCGATCGTTAACACGCCG
GATCGAGAGGACGACGCCGCGCAACGCCTCAAGGAAGAAGCCATCTACCG
CTTGGCGAAATTACACGCGGATGCTCACCAATTTCAAGAGGTGATGCTGC
TCTTAAAGACCAGTGATGTTTTCTTCGCCCAGATTCCCAAAGCCAAGACT
GCCAAAATAGTGCGGACGATCATTGATATCGTCACCAAAATCCCGGATTC
TGTCGATCTCCAGGTGGATCTCTGCAGAGAGGTTGTGGCCTGGTGCATTG
CCCAGAAACGAACCTTCCTCCGGCAACGGATTGAATCCCGCCTCGCCACC
TTGTTGTACGCACGCGCGGACTATTCAGGCGCTCTGGCCTTGATCAGCAA
GCTGTTGCGGGAACTCAAGAAATTCGACGACAAGCAGCTCTTGGTGGAGA
CCCATTTGGTAGAAGCCAGGATCGATCACGCCCTTCGGAACCTGCCCAAG
GCCAAGGCTGCGCTTACGGCCGCCCGCACCGCCGGGAACAGCATCTATGT
TGTGCCTGCTATGCAAGCGGAGCTGGATCAGATGTCTGGGGTGCTGCACT
GCGAGGAAGGGGACTACAAAACCGCCCATTCGTACTTTTTGGAAGCCTTC
GAGGCCTTCGATTCTTTGTCAGACTTGCGGGCGCCGAAATGCTTGGAATA
CATGATGCTTTGCCTGGTGCTGCAGGGTACCCCTCAGGACGTGTCGGCAG
TGACGAGCAAGCACGGTTTGAAATATGCAGGGGACGGGATGAATGCCCTG
ATTGCCATTGCCGCCGCGGCCAAGGAAAGGAGTTTGGAGGCCTTCGATGC
GGCCCGGAAGACCTACGGGGGCGTGCTCGCCCAGGATTTGCTGCTCACAC
ACCACGTCCATATCGTCTACGAGCAGCTGCTGGAATCAAATTTGTTGAAA
ATCATCGAACCTTTCTCGTGCGTGGAGATCGAGCACGTGGCCACTTTGAT
CAACCTTCCTCAGAAGAGCGTGGAGAGGAAACTCTCGCAGATGATCCTGG
ACGATAAGCTTTATGGCACCCTGGACCAAGGAAAAGGACAATTGCTCGTC
TACGAACGATCCACGTTGGACAAAACCTTCTCCCACGGCTTGGAACTGGT
GGGCAATCTGGGCATGGTGGTGGACAGTCTCTTTCGACGGGCACAAAAAA
TGGTGCATGCCGGGCATGCGAGAGAGGGCGGGGGCGGGGGGGGGGAGGGG
GCTGTATCCTCTGCCTAACAACTCTTTCCGGTGAGAAAGCAACGGGCGAT
GGGGGTGGCGGACGATTCCCCAAAAAAGAAGAGCTCGCTCTCGACGAACA
ACACGAGGGGATTATGTACCGTGCTCCGGTAGACACCTCGTTTGACGCTG
GCCAGAGTAACGCGAACCTGCAACCCTCCCAACTCTTATTTCTATTTTTA
AGATTGTACTTTGATTTTTCATCATGATTGCCTAGCCACACGGCAAGATT
AGAGTGGAACATATATGCCCTCTATC
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protein sequence of rna3699

>rna3699-protein ID=rna3699-protein|Name=rna3699|organism=Nannochloropsis gaditana|type=polypeptide|length=176bp
MSFASLLRTILFNLGALAVAYVLLLSGIHKFTYKLWGIELSQDLYRSLNK
SYLLATEQAYKHVDALLAAHPSLHARVPRFPASTVKTAVGVFELLLAFLW
MTRHRWRTAARGSALCFACWVAIAWSEFLPDAAGVEDGVTFALFFVALSI
GLLYIAPADGTEAVEAGRAGGAMKRR
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mRNA from alignment at CM002461.1:1005615..1007049-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3699 ID=rna3699|Name=rna3699|organism=Nannochloropsis gaditana|type=mRNA|length=1435bp|location=Sequence derived from alignment at CM002461.1:1005615..1007049- (Nannochloropsis gaditana)
AACGTCTTTTGCACAAAAAACGGGATGAGCCATGCTTTGTGGCACCCTGT
GTCAACCCCCCACCGTCCACACGGATATGATGGACAGGGGGCTGCTTTTC
AATGGGCAATCCTCCTATTTAGTTTTCCGCCTCTGGCAGCAAGCTAACCC
TCGCTCCCTCCAAACCTCAAGCGATGTGCTCGTGCAAACCCTTACGCCAT
GAGCAAAGCACAAGAACGAGGATTTCCGTTCTTGCCCCATGTGATCACGC
CGTGACATTCCTGGCATGCACACCACAGGTTTACGATTGCTTGTCGTCGT
CAAGTCATCCACGTTTCTGCTGCCTTCTTGGAAAAGGCGGCTGGGCTAGG
TGACCGGCATGTCCTTCGCCTCCCTTCTACGTACCATCCTCTTCAATTTG
GGCGCCTTGGCGGTGGCTTATGTCCTACTGTTATCCGGAATTCACAAGTT
CACCTACAAGGTATGGCTGAATTCACTGGTCACGAGAGGGTTGGTGGGAA
CTGTGTTTTAATTACAACACAGGTTGCTCCAGCCATTAGCGGAGTGCATG
CATGCCCTCGAGACTACAGCCACCTCTAATCATTCCTTTTACCGACCCAT
CCCGTCCACTTTCGGCACAGCTGTGGGGCATAGAACTCTCCCAGGACCTG
TACCGCTCCCTAAACAAATCCTACCTACTGGCCACCGAGCAAGCGTACAA
GCATGTCGATGCTTTGCTTGCCGCCCATCCCTCCCTTCACGCCCGCGTCC
CACGGTTCCCGGCCTCTACAGTCAAGACGGCAGTAGGCGTGTTTGAGCTT
TTACTAGCATTTTTGTGGATGACTCGTCACCGGTGGCGGACGGCTGCCAG
GGGCAGTGCTCTCTGCTTTGCATGCTGGGTAGCCATAGCATGGTCCGAAT
TCTTGCCAGATGCCGCAGGTGTGGAGGACGGGGTGACGTTTGCTTTGTTT
TTCGTGGCCCTGTCGATAGGATTGTTGTACATAGCTCCTGCCGACGGTAC
AGAGGCGGTGGAAGCGGGGCGCGCTGGGGGTGCTATGAAGAGGAGATGAT
ATGGATCAAGGGATACGTATCCAGGAAGCAATTTATTTCAACGATAAAGA
AAGTAACAGGTGATGAGAATGCCTGGGTGGGGTTAAATTCGCATCACAAT
TTCGTTATCTGTAAAATGCACCGGAGGCGTATGTGCGTGTGTTTCCCCAG
CATGAAGATAAATGCAAGGGTTTTTCACGTCTTGACATTGCTCTTGGGAT
ACCATGGGCATAAGCCTGCTTTCTGCTTATTTCGTGAGGGACAGACGAGA
CAGGGCGGAAGAGAAAGTAAGAGGACGAGAAATCGACAATCCTTAGACGG
GTCAATAATACATCAAATGCTTCACAAAAGCATGTGGTAAGAAAATCAGC
CCAACAAAAGGACACGGCTCAGATGATCTCCGTGG
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Coding sequence (CDS) from alignment at CM002461.1:1005615..1007049-

>rna3699 ID=rna3699|Name=rna3699|organism=Nannochloropsis gaditana|type=CDS|length=1062bp|location=Sequence derived from alignment at CM002461.1:1005615..1007049- (Nannochloropsis gaditana)
CTGTGGGGCATAGAACTCTCCCAGGACCTGTACCGCTCCCTAAACAAATC
CTACCTACTGGCCACCGAGCAAGCGTACAAGCATGTCGATGCTTTGCTTG
CCGCCCATCCCTCCCTTCACGCCCGCGTCCCACGGTTCCCGGCCTCTACA
GTCAAGACGGCAGTAGGCGTGTTTGAGCTTTTACTAGCATTTTTGTGGAT
GACTCGTCACCGGTGGCGGACGGCTGCCAGGGGCAGTGCTCTCTGCTTTG
CATGCTGGGTAGCCATAGCATGGTCCGAATTCTTGCCAGATGCCGCAGGT
GTGGAGGACGGGGTGACGTTTGCTTTGTTTTTCGTGGCCCTGTCGATAGG
ATTGTTGTACATAGCTCCTGCCGACGGTACAGAGGCGGTGGAAGCGGGGC
GCGCTGGGGGTGCTATGAAGAGGAGATGAATGTCCTTCGCCTCCCTTCTA
CGTACCATCCTCTTCAATTTGGGCGCCTTGGCGGTGGCTTATGTCCTACT
GTTATCCGGAATTCACAAGTTCACCTACAAGCTGTGGGGCATAGAACTCT
CCCAGGACCTGTACCGCTCCCTAAACAAATCCTACCTACTGGCCACCGAG
CAAGCGTACAAGCATGTCGATGCTTTGCTTGCCGCCCATCCCTCCCTTCA
CGCCCGCGTCCCACGGTTCCCGGCCTCTACAGTCAAGACGGCAGTAGGCG
TGTTTGAGCTTTTACTAGCATTTTTGTGGATGACTCGTCACCGGTGGCGG
ACGGCTGCCAGGGGCAGTGCTCTCTGCTTTGCATGCTGGGTAGCCATAGC
ATGGTCCGAATTCTTGCCAGATGCCGCAGGTGTGGAGGACGGGGTGACGT
TTGCTTTGTTTTTCGTGGCCCTGTCGATAGGATTGTTGTACATAGCTCCT
GCCGACGGTACAGAGGCGGTGGAAGCGGGGCGCGCTGGGGGTGCTATGAA
GAGGAGATGAATGTCCTTCGCCTCCCTTCTACGTACCATCCTCTTCAATT
TGGGCGCCTTGGCGGTGGCTTATGTCCTACTGTTATCCGGAATTCACAAG
TTCACCTACAAG
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Synonyms
Publications