EWM26983.1, cds3690 (CDS) Nannochloropsis gaditana

Overview
NameEWM26983.1
Unique Namecds3690
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1006590..1006691 -
Alignment locationCM002461.1:1006001..1006429 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26983.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100127g10.6215.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1006590..1006691 -
CM002461.1supercontigCM002461.1:1006001..1006429 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM26983.1 vs. NCBI_GenBank
Match: gi|585109150|gb|EWM26983.1| (hypothetical protein Naga_100127g10 [Nannochloropsis gaditana])

HSP 1 Score: 353.599 bits (906), Expect = 2.372e-123
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 
Query:    1 MSFASLLRTILFNLGALAVAYVLLLSGIHKFTYKLWGIELSQDLYRSLNKSYLLATEQAYKHVDALLAAHPSLHARVPRFPASTVKTAVGVFELLLAFLWMTRHRWRTAARGSALCFACWVAIAWSEFLPDAAGVEDGVTFALFFVALSIGLLYIAPADGTEAVEAGRAGGAMKRR 176
            MSFASLLRTILFNLGALAVAYVLLLSGIHKFTYKLWGIELSQDLYRSLNKSYLLATEQAYKHVDALLAAHPSLHARVPRFPASTVKTAVGVFELLLAFLWMTRHRWRTAARGSALCFACWVAIAWSEFLPDAAGVEDGVTFALFFVALSIGLLYIAPADGTEAVEAGRAGGAMKRR
Sbjct:    1 MSFASLLRTILFNLGALAVAYVLLLSGIHKFTYKLWGIELSQDLYRSLNKSYLLATEQAYKHVDALLAAHPSLHARVPRFPASTVKTAVGVFELLLAFLWMTRHRWRTAARGSALCFACWVAIAWSEFLPDAAGVEDGVTFALFFVALSIGLLYIAPADGTEAVEAGRAGGAMKRR 176
The following BLAST results are available for this feature:
BLAST of EWM26983.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109150|gb|EWM26983.1|2.372e-123100.00hypothetical protein Naga_100127g10 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3699rna3699Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications