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Properties
| Property Name | Value |
|---|
| Product | Phosphatidylinositol-glycan biosynthesis class S protein |
| Orig transcript id | gnl|cribi|Naga_100127g3.6210.mrna |
| Orig protein id | gnl|cribi|Naga_100127g3.6210 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:992753..994103 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3693 ID=rna3693|Name=rna3693|organism=Nannochloropsis gaditana|type=mRNA|length=276bp
ATGCGGCGCTCTTGCCCCCTCCTTATTACCCACCCGAGCATTATGCAGCG
ATTTTCCTTCCTCTCCTTCTTCCCATCTTTCTACCTCTTCTTCTGGGGCT
GTGGCACGAATGGAGGCGCTACAAGGAGAAGAAGAAGAAGAAGAAGCGAA
AGTCCGCGTGAGTGCGTGGCGCTCATCCCTGTGCCATACTCGAGGTCGGG
TAGCAACCGTGTGACAACCCCTTTCCAAGGAAGTGACTGCGGATCAAGGA
ACATGTGTGCCACACTACATTCTTAA back to topprotein sequence of rna3693 >rna3693-protein ID=rna3693-protein|Name=rna3693|organism=Nannochloropsis gaditana|type=polypeptide|length=411bp
MAGTRLWTQLWFLAGVVVLAPFAFRLAWWQEGFERVSFPDIPSSLRPPGA
PFLPFLVVLVGHDFSSSLMEMEVDDFRVALKRVSFIAASSGQENETLESF
ARRAVAENAAPEMDANMLQYWLVLLPSSLPMSSTEADSSTPSISGITWRL
EERFGYARRGNDDHSIIQQAGRELSHARAQISFRPATSTPLPLAREIQLT
LVSQDASVRFCRWNRAHLLNRHLNPLVRALIPLTTFLPSLQLLPYGTLLP
VQTKHAHGYPLPLSTLTGIRQYWETTLLPPSLSLVATPGPMASPLRFLFY
CPASSSEQSLAFMDDVEEGLRGTSNASSHHAVSTGLEIPGWGGALVLPAQ
NLSSSPPSAHGPHAPTCFLTEATYHHILSFLQPILRTTPSVLSPSSATFV
APTPGCLFLPT back to topmRNA from alignment at CM002461.1:992753..994103- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3693 ID=rna3693|Name=rna3693|organism=Nannochloropsis gaditana|type=mRNA|length=1351bp|location=Sequence derived from alignment at CM002461.1:992753..994103- (Nannochloropsis gaditana)
ATGGCAGGGACACGACTATGGACGCAGCTCTGGTTCCTTGCGGGCGTTGT
TGTTCTGGCACCATTCGCTTTCCGACTAGCCTGGTGGCAAGAAGGGTTCG
AACGTGTTTCCTTCCCTGATATACCCTCCTCCTTGAGGCCGCCCGGCGCG
CCTTTTTTACCCTTTCTGGTCGTCTTGGTAGGACATGACTTTTCTTCAAG
CCTCATGGAGATGGAGGTCGACGATTTTCGTGTGGCATTGAAGCGTGTTT
CCTTCATTGCTGCTTCCTCGGGCCAGGAAAACGAGACTCTTGAGAGCTTT
GCTCGCCGTGCTGTGGCAGAAAATGCTGCTCCGGAAATGGATGCCAATAT
GCTTCAATACTGGCTGGTCCTCCTACCTTCTTCTCTGCCCATGTCTTCTA
CAGAAGCTGACTCATCCACCCCTTCGATATCGGGCATCACTTGGCGCTTG
GAAGAACGCTTTGGGTATGCCCGCAGAGGCAACGACGACCATTCTATTAT
CCAGCAGGCTGGCCGAGAGCTCTCTCACGCCCGCGCGCAAATCTCCTTCC
GTCCCGCCACCTCCACCCCCCTCCCTCTTGCACGCGAAATACAGCTCACT
TTGGTCAGCCAAGATGCGAGCGTTCGCTTCTGTCGTTGGAATCGGGCCCA
TCTCTTAAACCGTCACTTGAACCCCTTGGTTCGTGCGCTAATACCCCTGA
CAACCTTCCTCCCCTCCCTTCAACTCCTTCCTTACGGAACGCTCTTGCCT
GTGCAGACCAAGCACGCCCACGGCTACCCTCTCCCTCTTTCCACCTTGAC
GGGCATCAGGCAATATTGGGAAACCACGCTCCTCCCTCCTTCTTTGTCTC
TCGTAGCCACTCCGGGGCCCATGGCGTCCCCCCTGCGGTTCCTCTTCTAT
TGCCCGGCCTCAAGTTCGGAGCAATCCTTGGCCTTCATGGATGATGTAGA
GGAAGGCCTGCGGGGAACCAGCAACGCCTCCTCCCACCACGCGGTCTCCA
CCGGCTTGGAGATTCCCGGGTGGGGGGGCGCCTTGGTCCTACCCGCCCAA
AACCTGTCCTCTTCCCCCCCTTCCGCCCATGGTCCCCATGCTCCCACCTG
TTTTCTTACAGAAGCAACCTACCACCACATCCTTTCTTTCCTCCAGCCCA
TCCTGCGGACGTCTCTTGGCTTCCCCCCCTCCCCCCCGCCCTCCCTCCCC
CTCCCCCGGCCCCAGCTCCTCCACCCGCTGGAAGTGGACAGCCTGGCCAC
TCACACCCTCTCTATCCGGCACCAGGACACCCTCCGTTCTCTCTCCATCC
TCCGCGACCTTCGTCGCGCCCACCCCGGGATGCCTTTTCCTGCCCACGTA
G back to topCoding sequence (CDS) from alignment at CM002461.1:992753..994103- >rna3693 ID=rna3693|Name=rna3693|organism=Nannochloropsis gaditana|type=CDS|length=2472bp|location=Sequence derived from alignment at CM002461.1:992753..994103- (Nannochloropsis gaditana)
GACACCCTCCGTTCTCTCTCCATCCTCCGCGACCTTCGTCGCGCCCACCC
CGGGATGCCTTTTCCTGCCCACGTAGATGGCAGGGACACGACTATGGACG
CAGCTCTGGTTCCTTGCGGGCGTTGTTGTTCTGGCACCATTCGCTTTCCG
ACTAGCCTGGTGGCAAGAAGGGTTCGAACGTGTTTCCTTCCCTGATATAC
CCTCCTCCTTGAGGCCGCCCGGCGCGCCTTTTTTACCCTTTCTGGTCGTC
TTGGTAGGACATGACTTTTCTTCAAGCCTCATGGAGATGGAGGTCGACGA
TTTTCGTGTGGCATTGAAGCGTGTTTCCTTCATTGCTGCTTCCTCGGGCC
AGGAAAACGAGACTCTTGAGAGCTTTGCTCGCCGTGCTGTGGCAGAAAAT
GCTGCTCCGGAAATGGATGCCAATATGCTTCAATACTGGCTGGTCCTCCT
ACCTTCTTCTCTGCCCATGTCTTCTACAGAAGCTGACTCATCCACCCCTT
CGATATCGGGCATCACTTGGCGCTTGGAAGAACGCTTTGGGTATGCCCGC
AGAGGCAACGACGACCATTCTATTATCCAGCAGGCTGGCCGAGAGCTCTC
TCACGCCCGCGCGCAAATCTCCTTCCGTCCCGCCACCTCCACCCCCCTCC
CTCTTGCACGCGAAATACAGCTCACTTTGGTCAGCCAAGATGCGAGCGTT
CGCTTCTGTCGTTGGAATCGGGCCCATCTCTTAAACCGTCACTTGAACCC
CTTGGTTCGTGCGCTAATACCCCTGACAACCTTCCTCCCCTCCCTTCAAC
TCCTTCCTTACGGAACGCTCTTGCCTGTGCAGACCAAGCACGCCCACGGC
TACCCTCTCCCTCTTTCCACCTTGACGGGCATCAGGCAATATTGGGAAAC
CACGCTCCTCCCTCCTTCTTTGTCTCTCGTAGCCACTCCGGGGCCCATGG
CGTCCCCCCTGCGGTTCCTCTTCTATTGCCCGGCCTCAAGTTCGGAGCAA
TCCTTGGCCTTCATGGATGATGTAGAGGAAGGCCTGCGGGGAACCAGCAA
CGCCTCCTCCCACCACGCGGTCTCCACCGGCTTGGAGATTCCCGGGTGGG
GGGGCGCCTTGGTCCTACCCGCCCAAAACCTGTCCTCTTCCCCCCCTTCC
GCCCATGGTCCCCATGCTCCCACCTGTTTTCTTACAGAAGCAACCTACCA
CCACATCCTTTCTTTCCTCCAGCCCATCCTGCGGACGACACCCTCCGTTC
TCTCTCCATCCTCCGCGACCTTCGTCGCGCCCACCCCGGGATGCCTTTTC
CTGCCCACGTAGATGGCAGGGACACGACTATGGACGCAGCTCTGGTTCCT
TGCGGGCGTTGTTGTTCTGGCACCATTCGCTTTCCGACTAGCCTGGTGGC
AAGAAGGGTTCGAACGTGTTTCCTTCCCTGATATACCCTCCTCCTTGAGG
CCGCCCGGCGCGCCTTTTTTACCCTTTCTGGTCGTCTTGGTAGGACATGA
CTTTTCTTCAAGCCTCATGGAGATGGAGGTCGACGATTTTCGTGTGGCAT
TGAAGCGTGTTTCCTTCATTGCTGCTTCCTCGGGCCAGGAAAACGAGACT
CTTGAGAGCTTTGCTCGCCGTGCTGTGGCAGAAAATGCTGCTCCGGAAAT
GGATGCCAATATGCTTCAATACTGGCTGGTCCTCCTACCTTCTTCTCTGC
CCATGTCTTCTACAGAAGCTGACTCATCCACCCCTTCGATATCGGGCATC
ACTTGGCGCTTGGAAGAACGCTTTGGGTATGCCCGCAGAGGCAACGACGA
CCATTCTATTATCCAGCAGGCTGGCCGAGAGCTCTCTCACGCCCGCGCGC
AAATCTCCTTCCGTCCCGCCACCTCCACCCCCCTCCCTCTTGCACGCGAA
ATACAGCTCACTTTGGTCAGCCAAGATGCGAGCGTTCGCTTCTGTCGTTG
GAATCGGGCCCATCTCTTAAACCGTCACTTGAACCCCTTGGTTCGTGCGC
TAATACCCCTGACAACCTTCCTCCCCTCCCTTCAACTCCTTCCTTACGGA
ACGCTCTTGCCTGTGCAGACCAAGCACGCCCACGGCTACCCTCTCCCTCT
TTCCACCTTGACGGGCATCAGGCAATATTGGGAAACCACGCTCCTCCCTC
CTTCTTTGTCTCTCGTAGCCACTCCGGGGCCCATGGCGTCCCCCCTGCGG
TTCCTCTTCTATTGCCCGGCCTCAAGTTCGGAGCAATCCTTGGCCTTCAT
GGATGATGTAGAGGAAGGCCTGCGGGGAACCAGCAACGCCTCCTCCCACC
ACGCGGTCTCCACCGGCTTGGAGATTCCCGGGTGGGGGGGCGCCTTGGTC
CTACCCGCCCAAAACCTGTCCTCTTCCCCCCCTTCCGCCCATGGTCCCCA
TGCTCCCACCTGTTTTCTTACAGAAGCAACCTACCACCACATCCTTTCTT
TCCTCCAGCCCATCCTGCGGAC back to top
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