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Properties
| Property Name | Value |
|---|
| Product | ubiquinone biosynthesis protein coq4 mitochondrial-like protein |
| Orig transcript id | gnl|cribi|Naga_100444g2.1599.mrna |
| Orig protein id | gnl|cribi|Naga_100444g2.1599 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:917947..919441 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3667 ID=rna3667|Name=rna3667|organism=Nannochloropsis gaditana|type=mRNA|length=1211bp
ACTAGACATGTATGTTATGACAGAGCTGGTCTGCGTGCTTGCCAGGGGAG
ACGTAGAGATCGGAATGGAAGCCTTCCTTTGTCTCGCGCCCGCTCAACGT
GGTTTTGCGTAGTGGAAAGACCCACACGGATACATGAGCCAGATAAAATA
TGGCATATGTGACACATTAACGCTGATTGAGGGGTTATGTGCGTGTATGT
GGTTCGAAAGGTTGCGGTTAACAGGGCATCAGGAGCAGCAAGCTACAGGG
TACAGGCGTGAAGGCTGGTTAGAGTCGTCAAGATTAAGTGCGTGCGCGCA
TTTTGTTGTGCCTATCATCACATTCATTCTCAGAGAATAATAGCATGCCG
ATACGTTGTGGTGCTTCAATGCCATGAATGTGGAAGCCTGGGGCCTAGGA
AGGGGCAAGCATGTAGCACTAAGCGTGGGTCATCTCGAGGACTAAATACC
TTTCCTGCCTCAACCCGGGCACCAAACACAGGGCACAGGATCGCAGCACA
CACATCAGGAATTCATGCTGCGCAATTCAATTACACGGCAGCTCGCTACT
GTAAAGACAGCCTTCCGGGTTCAGCGCAGAGTGCATGCGCCCGCTATCAT
GAGCGCCCCTTCGCGGCGTTGCTTCTCTGTTCCCCCATCCTCGTCCCCGC
CTTCAAACCCCAGCAACTCTCCGTACACTCACGGCGCGCACCGAAGTAAT
GCCGAAGAACTCGTCGCACAGTTCCCGGTGACAGAGGTGCATGGGACGGT
GGCATTGTGCGATGGAGGGGGAGGGGGCATGGGTCACCCGATCGAGTACA
TCCAGCTCAACACAGTGGGGGAGGAAGTTGCAACCTGCAAGTACTGTGGA
CTGCAGTACAAGATGGCACATCACTGACGAATGTGGGATCGCTCTTCTTA
AAAGAGTAGCCGCTTGTGGAGGACAAAATTTGTGCCCCTTGGATGTGGAA
AAGAAATTTACAGGAAGCAAACTTTCCTGGACAACAGCGATCATAGTCCT
ACATTTGCTTTATATCCCTGCCAACGTGTCTATCGTACAGGAGCTTGATT
ATATTGTCCATTTCACAAGAAAGGAGTCTCCGATGGATTAGCAAACCCCT
GGACAGGACGATTTCGTACGGTCCAATCCAGGGCTTTAGCTATATTGCAC
TCCTTTCCTGTAATGCAGGCAATCTAATAAGCTTTTTAAAGAAAACTATG
AGAATTTTGCG back to topprotein sequence of rna3667 >rna3667-protein ID=rna3667-protein|Name=rna3667|organism=Nannochloropsis gaditana|type=polypeptide|length=310bp
MHPLTNMLHRNITLTSKVPYLMRAKVVSLRGTCTTATSSLLGVPSRPQAP
CARTFKRMRPFSTTSSQSSGGKETSPPAVPETPLYSSHIPTSGFQKLYIA
GFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKP
DIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELA
FVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGP
LSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQ
IVTAPPMTAV back to topmRNA from alignment at CM002461.1:917947..919441+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3667 ID=rna3667|Name=rna3667|organism=Nannochloropsis gaditana|type=mRNA|length=1495bp|location=Sequence derived from alignment at CM002461.1:917947..919441+ (Nannochloropsis gaditana)
GCTGCTCCTGATGCCCTGTTAACCGCAACCTTTCGAACCACATACACGCA
CATAACCCCTCAATCAGCGTTAATGTGTCACATATGCCATATTTTATCTG
GCTCATGTATCCGTGTGGGTCTTTCCACTACGCAAAACCACGTTGAGCGG
GCGCGAGACAAAGGAAGGCTTCCATTCCGATCTCTACGTCTCCCCTGGCA
AGCACGCAGACCAGCTCTGTCATAACATACATGTCTAGTACATCGATTTT
CTACAACCGTTAATCGCGGGAGTACCACCAGTGCGCTCAATCACACATTC
ACCGCCGAGGCTTTTTTCTAACGTGTGAGGAGAGCAGTAAAGAGGTGTCT
TATTTTTAAGCAGCGTCATACGCCAGCGGTACTAGTAGTCGTTGGGCACT
CGAACGTCTCAGACCTCAGCTGCTCCATTTTGGCCCGCACAGCTCCGCTA
TCGATCGACATGCATCCACTGACCAATATGCTACACAGGAATATCACCTT
GACTTCCAAAGTGCCTTACCTCATGCGCGCGAAAGTTGTGAGCTTGAGAG
GTACGTGCACGaccgcgacctcctcccttctagGCGTTCCAAGTCGACCT
CAAGCCCCTTGCGCACGCACATTCAAGCGGATGCGGCCATTTTCCACCAC
TTCGTCCCAGTCATCTGGCGGCAAGGAAACGTCACCACCCGCAGTGCCAG
AGACGCCATTGTATTCTTCTCACATTCCCACAAGCGGCTTTCAGAAACTC
TACATTGCTGGGTTTTCAGCCGCTACCGCTTTCCGCGATCCAGAGCGGGG
TGATATGGTAGCAGCTTTGGGTGAAACAACCGGAACGAGGGCTTTGCAGC
GTCTGAGGCGTGCCATGTCTGCTGACCCTGTGGGACGAGAACTGCTGGCG
GCTAAACCCGACATCAAAGAAGACTCGACGCGTCCAGATCGTCTTCGGAG
ACTCCCCGAAGGTACCTTTGGTCGCGAGTACGCCCGTTTCCTCGACCACC
ACGGCTATTCTCCCGATGAGCGCGCGGCGGTCCGATTCGTGGATGATGCG
GAATTGGCCTTCGTAATGCAACGGTACCGACAAGTGCATGATTTTTGGCA
CGTGTTGTGCGGACTGCCGCCTACAGTTCTGGGAGAGTTGGCGCTAAAGT
GGTTCGAGATGGTCCAAACTCGCTTGCCCATTGCGGCTTTTAGTGGCGTG
GTGGGGCCTTTATCTTTGTCGGCGCAAGAGCGAAAACTTCTTAAGGAGCA
ATATATACCCTGGGCGGTGCGGGCGGCAGTCAAAGCCAGGCCATTAATGT
GCGTCTGGTACGAGCGTAGCTTCGAGGAACCTTTGGAACTGATGCGGAAA
CGACTACAAATCGTAACAGCTCCGCCGATGACGGCTGTGTAATCAATGTG
GGAATTCATAAGTGCACACGGATGCGTCAGGAGTGAAAGCAATGATGTGG
ACCTTTCCAATAGGTCGGACAAGCATGTTTTTGAATCCCTGTGTA back to topCoding sequence (CDS) from alignment at CM002461.1:917947..919441+ >rna3667 ID=rna3667|Name=rna3667|organism=Nannochloropsis gaditana|type=CDS|length=933bp|location=Sequence derived from alignment at CM002461.1:917947..919441+ (Nannochloropsis gaditana)
ATGCATCCACTGACCAATATGCTACACAGGAATATCACCTTGACTTCCAA
AGTGCCTTACCTCATGCGCGCGAAAGTTGTGAGCTTGAGAGGTACGTGCA
CGaccgcgacctcctcccttctagGCGTTCCAAGTCGACCTCAAGCCCCT
TGCGCACGCACATTCAAGCGGATGCGGCCATTTTCCACCACTTCGTCCCA
GTCATCTGGCGGCAAGGAAACGTCACCACCCGCAGTGCCAGAGACGCCAT
TGTATTCTTCTCACATTCCCACAAGCGGCTTTCAGAAACTCTACATTGCT
GGGTTTTCAGCCGCTACCGCTTTCCGCGATCCAGAGCGGGGTGATATGGT
AGCAGCTTTGGGTGAAACAACCGGAACGAGGGCTTTGCAGCGTCTGAGGC
GTGCCATGTCTGCTGACCCTGTGGGACGAGAACTGCTGGCGGCTAAACCC
GACATCAAAGAAGACTCGACGCGTCCAGATCGTCTTCGGAGACTCCCCGA
AGGTACCTTTGGTCGCGAGTACGCCCGTTTCCTCGACCACCACGGCTATT
CTCCCGATGAGCGCGCGGCGGTCCGATTCGTGGATGATGCGGAATTGGCC
TTCGTAATGCAACGGTACCGACAAGTGCATGATTTTTGGCACGTGTTGTG
CGGACTGCCGCCTACAGTTCTGGGAGAGTTGGCGCTAAAGTGGTTCGAGA
TGGTCCAAACTCGCTTGCCCATTGCGGCTTTTAGTGGCGTGGTGGGGCCT
TTATCTTTGTCGGCGCAAGAGCGAAAACTTCTTAAGGAGCAATATATACC
CTGGGCGGTGCGGGCGGCAGTCAAAGCCAGGCCATTAATGTGCGTCTGGT
ACGAGCGTAGCTTCGAGGAACCTTTGGAACTGATGCGGAAACGACTACAA
ATCGTAACAGCTCCGCCGATGACGGCTGTGTAA back to top
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