EWM27019.1, cds3658 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27019.1 vs. NCBI_GenBank
Match: gi|585109190|gb|EWM27019.1| (ubiquinone biosynthesis protein coq4 mitochondrial-like protein [Nannochloropsis gaditana]) HSP 1 Score: 634.795 bits (1636), Expect = 0.000e+0 Identity = 310/310 (100.00%), Postives = 310/310 (100.00%), Query Frame = 0
Query: 1 MHPLTNMLHRNITLTSKVPYLMRAKVVSLRGTCTTATSSLLGVPSRPQAPCARTFKRMRPFSTTSSQSSGGKETSPPAVPETPLYSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAPPMTAV 310
MHPLTNMLHRNITLTSKVPYLMRAKVVSLRGTCTTATSSLLGVPSRPQAPCARTFKRMRPFSTTSSQSSGGKETSPPAVPETPLYSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAPPMTAV
Sbjct: 1 MHPLTNMLHRNITLTSKVPYLMRAKVVSLRGTCTTATSSLLGVPSRPQAPCARTFKRMRPFSTTSSQSSGGKETSPPAVPETPLYSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAPPMTAV 310
BLAST of EWM27019.1 vs. NCBI_GenBank
Match: gi|301101922|ref|XP_002900049.1| (ubiquinone biosynthesis protein COQ4 [Phytophthora infestans T30-4] >gi|262102624|gb|EEY60676.1| ubiquinone biosynthesis protein COQ4 [Phytophthora infestans T30-4]) HSP 1 Score: 262.692 bits (670), Expect = 3.852e-84 Identity = 125/223 (56.05%), Postives = 159/223 (71.30%), Query Frame = 0
Query: 85 YSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAPPM 307
Y SH+PTS QKL ++ SA T F +PERGDM+AALGE TG AL+R+ M ADPVG +LA KP I+ D D LR LPE +FGR YA F+D HG+ D R+ VRFVDD ELA+VMQR+R++HDFWH L +PPT LGE+ALK+ EM ++LP++A S VGPL LS++ER LL + Y+PWA RA+ A L CV YE FE P+E +R+RL + APP+
Sbjct: 14 YDSHMPTSPLQKLVLSVTSALTVFANPERGDMLAALGEVTGRDALRRIHARMCADPVGARILAEKPVIRNDKIDMDYLRALPEDSFGRRYATFMDSHGFDADGRSPVRFVDDPELAYVMQRHRELHDFWHTLFDVPPTELGEIALKYVEMAHSKLPVSALSAFVGPLRLSSEERCLLVKVYVPWANRASRNAHSLHCVMYEEEFETPIEKLRQRLNVEVAPPL 236
BLAST of EWM27019.1 vs. NCBI_GenBank
Match: gi|1173937775|gb|OQR88422.1| (ubiquinone biosynthesis protein COQ4 [Achlya hypogyna]) HSP 1 Score: 258.455 bits (659), Expect = 2.636e-82 Identity = 123/224 (54.91%), Postives = 162/224 (72.32%), Query Frame = 0
Query: 84 LYSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAPPM 307
L++ H+PT+ QK+ +A +A + +PERGDM+AALG+ TG AL+++ M +DP G E+LA KP I+ T D LR LP+ +FG Y +F+D HG+ D RA VRFVDD ELA+V+QRYR++HDFWHVL GLPPTV GELALK+ E+VQT LP+AA SG+VGPL LS ERK L Y+PWA +A +A LM V+YER +E LE +R RL+I+ APP+
Sbjct: 32 LHAHHVPTTPLQKILVAATAAVSVMANPERGDMLAALGDATGEVALRQMHLKMCSDPTGMEILAQKPRIRSTVTDVDALRSLPKDSFGYAYTQFMDAHGFEADGRAHVRFVDDPELAYVLQRYRELHDFWHVLFGLPPTVFGELALKYVELVQTGLPVAALSGIVGPLRLSCDERKELFTTYLPWAHQAGKQAPFLMNVYYEREYESNLEDLRARLRILVAPPV 255
BLAST of EWM27019.1 vs. NCBI_GenBank
Match: gi|695411828|ref|XP_009525582.1| (hypothetical protein PHYSODRAFT_559076 [Phytophthora sojae] >gi|348676707|gb|EGZ16524.1| hypothetical protein PHYSODRAFT_559076 [Phytophthora sojae]) HSP 1 Score: 257.299 bits (656), Expect = 1.852e-81 Identity = 121/223 (54.26%), Postives = 159/223 (71.30%), Query Frame = 0
Query: 85 YSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAPPM 307
Y SH+PT+ QK+ ++ SA T F +P+RGDM+AALGE TG AL+R+ M ADP+G +LA KP I+ D + LR LP +FGR YA F+D HG+ D R+ VRFVDD ELA+VMQR+R+ HDFWH L +PPTVLGE+ALK+ EM ++LP++A S VGPL LS++ER LL + Y+PWA RA+ KA L CV YE FE P++ +R+RL I APP+
Sbjct: 53 YDSHMPTTPLQKIVLSVTSALTVFANPDRGDMLAALGEVTGRDALRRIHARMCADPMGARILAEKPVIRNDKIDMEYLRALPADSFGRHYATFMDSHGFDADGRSLVRFVDDPELAYVMQRHRESHDFWHTLFDVPPTVLGEIALKYVEMAHSQLPVSALSAFVGPLRLSSEERCLLMKVYVPWASRASKKAHSLHCVMYEEEFETPIQELRRRLNIEVAPPL 275
BLAST of EWM27019.1 vs. NCBI_GenBank
Match: gi|1173948816|gb|OQR96904.1| (ubiquinone biosynthesis protein COQ4 [Thraustotheca clavata]) HSP 1 Score: 253.062 bits (645), Expect = 2.966e-80 Identity = 120/224 (53.57%), Postives = 159/224 (70.98%), Query Frame = 0
Query: 85 YSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAPPMT 308
Y H+PT+ QK+ +A +A + F +PERGDM+AALG++TG AL+++ M +DP G ++LA KP I+ T D LR LP+ TFG Y +F+D HG+ D R+ VRFVDD ELA+V+QRYR++HDFWHVL GLPPTV GELALK+ E+VQT LP+ SG VGPL L+ +ERK L +YIPWA RA +A LM V+YE+ ++ LE +R RL I APP+
Sbjct: 27 YLHHVPTTPLQKILVAATAAVSVFANPERGDMLAALGDSTGEVALRQMHLKMCSDPTGMKILAEKPRIRSTVTDVDALRSLPKETFGYAYTQFMDAHGFEADGRSHVRFVDDPELAYVLQRYRELHDFWHVLFGLPPTVFGELALKYVELVQTGLPVCTLSGFVGPLRLNCEERKDLFSRYIPWAYRAGKEAPFLMNVYYEQEYQTKLEDLRARLNIRVAPPVN 250
BLAST of EWM27019.1 vs. NCBI_GenBank
Match: gi|813199740|ref|XP_012209441.1| (hypothetical protein SPRG_14929 [Saprolegnia parasitica CBS 223.65] >gi|641525364|gb|KDO19829.1| hypothetical protein SPRG_14929 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 252.292 bits (643), Expect = 6.855e-80 Identity = 122/222 (54.95%), Postives = 158/222 (71.17%), Query Frame = 0
Query: 84 LYSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAP 305
L++ H+PT+ QKL +A +A + F +PERGDM+AALG+ TG AL+++ M +DPVG E+LA KP I+ T D LR LP +FG Y +F+D HG+ D RA VRFVDDAELA+V+QRYR++HDFWHVL GLPPTV E+ALK+ E+VQT LP+ A SG VGPL LS ERK L ++PWA RA +A L+ V+YER +E LE +R+RL I AP
Sbjct: 31 LHAHHVPTTPTQKLLVAATAAVSVFANPERGDMLAALGDATGEVALRQMHLKMCSDPVGMEILAQKPRIRSSVTDIDALRSLPTDSFGYAYTQFMDAHGFEADGRAHVRFVDDAELAYVLQRYRELHDFWHVLFGLPPTVFSEIALKYVELVQTGLPVCALSGFVGPLRLSCDERKELLGTFVPWAYRAGREAPCLLNVYYEREYETKLEDLRRRLNIRVAP 252
BLAST of EWM27019.1 vs. NCBI_GenBank
Match: gi|669148706|ref|XP_008609915.1| (hypothetical protein SDRG_05946 [Saprolegnia diclina VS20] >gi|530738252|gb|EQC36494.1| hypothetical protein SDRG_05946 [Saprolegnia diclina VS20]) HSP 1 Score: 249.98 bits (637), Expect = 6.443e-79 Identity = 122/222 (54.95%), Postives = 157/222 (70.72%), Query Frame = 0
Query: 84 LYSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAP 305
L++ H+PT+ QKL +A +A + F +PERGDM+AALG+ TG AL+++ M +DPVG E+LA KP I+ T D LR LP TFG Y +F+D HG+ D RA VRFVDD ELA+V+QRYR++HDFWHVL GLPPTV E+ALK+ E+VQT LP+ A SG VGPL LS ERK L ++PWA RA +A L+ V+YER +E LE +R+RL I AP
Sbjct: 32 LHAHHVPTTPTQKLLVAATAAVSVFANPERGDMLAALGDATGEVALRQMHLKMCSDPVGMEILAQKPRIRSAVTDIDALRSLPTDTFGYAYTQFMDAHGFEADGRAHVRFVDDPELAYVLQRYRELHDFWHVLFGLPPTVFSEIALKYVELVQTGLPVCALSGFVGPLRLSCGERKELLGTFVPWAYRAGREAPCLLNVYYEREYETKLEDLRRRLNIRVAP 253
BLAST of EWM27019.1 vs. NCBI_GenBank
Match: gi|1214694321|gb|OWZ08404.1| (Ubiquinone biosynthesis protein COQ4 [Phytophthora megakarya]) HSP 1 Score: 248.054 bits (632), Expect = 4.405e-78 Identity = 123/223 (55.16%), Postives = 159/223 (71.30%), Query Frame = 0
Query: 85 YSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAPPM 307
Y SH+PT+ QK+ ++ SA T F +PERGDM+AALGE TG AL+R+ M ADPVG +L KP I+ D+ + LR LP +FGR YA F+D HG+ D R+ VRFVDD ELA+VMQR+R+ HDFWH L +PPTVLGE+ LK+ E+V ++LP++A S VGPL LS++ER LL + YIPWA RA+ KA L CV YE FE P+E +R+RL I APP+
Sbjct: 30 YDSHMPTTPLQKIVLSITSALTVFTNPERGDMLAALGEVTGRDALRRIHARMCADPVGTRILVEKPLIRNDNIDMEYLRTLPADSFGRHYATFMDSHGFYADGRSLVRFVDDPELAYVMQRHREAHDFWHTLFDVPPTVLGEITLKYVELVHSQLPVSALSAFVGPLRLSSEERCLLMKVYIPWATRASKKAHSLHCVMYEEEFETPMEELRQRLNIDVAPPL 252
BLAST of EWM27019.1 vs. NCBI_GenBank
Match: gi|567976285|gb|ETL26812.1| (hypothetical protein L916_19566 [Phytophthora parasitica]) HSP 1 Score: 247.669 bits (631), Expect = 1.129e-77 Identity = 123/223 (55.16%), Postives = 159/223 (71.30%), Query Frame = 0
Query: 85 YSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAPPM 307
Y SH+PT+ QKL ++ SA T F +PERGDM+AALGE TG AL+R+ M ADPVG +LA KP I+ ++ D LR LP +FGR YA F+D HG+ D R+ VRFVDD ELA+VMQR+R+ HDFWH L +PPTVLGE+ALK+ EM ++LP++A S VGPL L+++ER LL + Y+PWA RA+ A L CV YE FE P+E +R+RL I APP+
Sbjct: 52 YESHMPTTPLQKLALSVTSALTVFANPERGDMLAALGEVTGRDALRRIHARMCADPVGARILAEKPVIRNENIDMDYLRALPAESFGRHYATFMDSHGFDADGRSLVRFVDDPELAYVMQRHRESHDFWHTLFNVPPTVLGEIALKYVEMAHSKLPVSALSAFVGPLRLTSEERCLLMKVYVPWANRASKNAHSLHCVMYEEEFETPIEELRQRLNIEVAPPL 274
BLAST of EWM27019.1 vs. NCBI_GenBank
Match: gi|1001614018|gb|KXS17770.1| (Coq4-domain-containing protein [Gonapodya prolifera JEL478]) HSP 1 Score: 245.358 bits (625), Expect = 6.830e-77 Identity = 124/231 (53.68%), Postives = 153/231 (66.23%), Query Frame = 0
Query: 77 PAVPETPLYSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQERKLLKEQYIPWAVRAAVKARPLMCVWYERSFEEPLELMRKRLQIVTAPPM 307
P P TP Y SHIP+S QKL IA SA TA P R DMVAALGETTG AL R+R M AD VGR +L KP + + D LR+LP GTFGREY R+LD G PD R V++VDDA LA+VMQRYRQVHDFWHV+ G+ +V ELA+KW+E +P+A SGV GPL L+AQ+R+ L Y+PWA+R A + + M V+YE +E PLE +RK L + P +
Sbjct: 50 PLNPYTPKYQSHIPSSSIQKLVIAVGSAFTALAVPTRADMVAALGETTGPYALGRIRDKMMADAVGRRILREKPVVDSATVDLDALRQLPNGTFGREYVRWLDAEGVGPDSREPVKYVDDAVLAYVMQRYRQVHDFWHVVTGMSVSVEAELAVKWWEFAHHGMPVALLSGVFGPLRLTAQQRERLLTVYVPWALRNAGRGKYPMNVYYEEKWEMPLEELRKELGVEAVPAL 280 The following BLAST results are available for this feature:
BLAST of EWM27019.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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