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Properties
| Property Name | Value |
| Product | protein phosphatase 1a isoform 2 |
| Orig transcript id | gnl|cribi|Naga_100309g4.7055.mrna |
| Orig protein id | gnl|cribi|Naga_100309g4.7055 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002461.1 | supercontig | CM002461.1:905559..908574 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3660 ID=rna3660|Name=rna3660|organism=Nannochloropsis gaditana|type=mRNA|length=2328bp TAGTGGGCAGTGACACATCGTCGAGCCAGTCTGCTTGTCAATTTAGGGCA TTTGCGAACGCATGTGATGTAAAGGATGCTGGTTTTTTTCATTGATGACC ACTATTGTCTAGGACACTTTGTCAGAAAGGGATGCCCTCTTGCTCCTTGA AGCATGGGCTATGAAGGAGTGGCCTTCCACCAACTTGATGTCTCTACTCA CGAATAACGGAGGTTTTGCATTTCATCGATCCCCTTTTCTCCCGTTCTTC TAACTGCAGGAAACACAGAAGTTGTTTCTGGAAGTCGATTGACATGGGTA GTCATCTGGCCAAGCCCATCACCGAGAAAGAATCGTACGAGAGTAATGCA CATGGGCTAAATTTTGGGGCAGCCGCGATGCAAGGCTGGCGGGTGGAGAT GGAAGACGCTCACACGGTGATCGAGACTATGGGTAAGACAAGCGGGTGCC TGGGAAGGAGAAGGCATAGTCAACCCCCGAGGCCGAAGCCCTGCTTGCAA CAAGGGTCTGGCGTCAATGCGCAGGCTGATGACTGCGACCGTAGTGTGAG AAAAGGATTCGAGGATCTGAGAGCCGGGAGGAAGAGGGGAAAGGAAAACA TAGGGGTATCAGGGGCAGTGTCTTATCAGACAACGCGCTGATTCTCGGTG CCAGATGAAGTGTCCCTCGATAATCCTCCTTTGTTTCCCGAGGCCATGCG GCTGCCCTGGTCGTCCAGAGTAGATTGAAGCCGCCCCGCTCACCTCTCCC CTCCTTCCCTTCATCGGCCGGGACCTCAGACCCGGAGCTGGAGGGCCACT CTTTCATCGCAGTCTACGACGGGCACGGGGGGCAGTACTCCGCCATCTAT GCGGGGAAGCACATGGTGGATTTCGTCAGACGGACGGTAGCTTACACGGA GTACAAGAAAACCAAGGACGTGGCCCACCTCCAGACCGCCATCCACTCCG CGTTTCTGAATCTGGACGAGTCCCTGAAACTCCAAGATGAATTTGTCCAC AAGCACGATACCAGTGGATGCACGGCCATCTGCGCCATCATCACGCCTTC CCATGTGGTGGTTGCCAACGCCGGCGACTCTCGCGCGGTCATGTACACTA CAAAGGGCACCCACCAGCTCTCGCGCGACCACAAACCCTACCTGGAGGAC GAGCGGAAGCGGATCGAGAGCGCGGGGGGGATGGTGAGCATGCAGCGTGT CGACGGGGACTTGGCCCTGTCGCGGTCATTGGGAGACTTCCAATTCAAAG ACCGAAACCTTCCCCCCGAACGCCAAAAAGTCACGGCTGTGCCCGAGGTT CAGGTGCATGTACGGGATCCGGAGAAGGACTTGTGTCTCCTCCTCGCCTG CGACGGGGTCTGGGATGTCTGTGAGAGCGCCGAGGCCGGGCGCATCGTCT TCGACATCCTGGGGGACGGGGAGAAACGGATGGCCTTGGTCGCGGAGGAG CTCTTGGACCAATGCCTGTTGCGGTATTCGAAAGACAATATGTCGGCGGT GGTCGTTGGCTTTGCCAAGTTGTGGGAGGAGCACGGCAAGGAGGGAGAGG GGGTGGAGGGGAGGCGGCGAAGGAGGCTGCCTGCGGGGGAGGAGGAGGAA TCGAACGATGGAGGAAAGGCGTCAGAGAGGGGAAAGGAAGAAAAGTAGGG GCTGGAAGAGCTGATGTTTTATCGTGAGAGGAGGATCAAGGCCGACACGA GGGGTAAGAAGACCATAGATTAGTTGCCTATTTGCCGATAAATTGAACCA GTAATGGCGCGAGCACCAGGAGCAGCATCCACAGCATTTGCAGCAGCCGT GTCGGCAGGAGGGGGGGGGTCGGTAAGCACATGCCAAGAAAGAGGCCGAT GGATGGTGATATCCAACGCATGGAGCAGGAAACGAGAAGAAAGAGACAAG GAGTGCATGTGGTATGGACGGGCGTCATCGTGAGCTGGATTGCATGAGCA AACATTCGGGAAGCGTGCAAGCAAATTGCTTCAACTGATGTGAACACGGC GGTGCGATTCTATACGATGGGACAGTTTTGATAAACAGTGAATTCTGATC CCAGCGATAAGAGATGCGGTCGCGTAAACTTTTCTGGCTGGCATGTGGCT ACATTCGAATGGGAGCCAAGAGGGATGAGCAACAGAGCCTCCCATCCCTG CACTTTTTCTAAAATTGACAATAGCAACAACTGTTTTGCGAATTTGCCGG AAAGAGTGAAGATTAAAGTGTATTTCTCTGCAAGTCCCTCAGTATTATGT GCATGCATGTCAAAAAATAATTCAAGCCAGCGGGCTCGATAGCCCAAAAG AAACACAAAACTATCAAGAGCGCGGAGA back to topprotein sequence of rna3660 >rna3660-protein ID=rna3660-protein|Name=rna3660|organism=Nannochloropsis gaditana|type=polypeptide|length=335bp MGSHLAKPITEKESYESNAHGLNFGAAAMQGWRVEMEDAHTVIETMDPEL EGHSFIAVYDGHGGQYSAIYAGKHMVDFVRRTVAYTEYKKTKDVAHLQTA IHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAV MYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDF QFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAG RIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGK EGEGVEGRRRRRLPAGEEEESNDGGKASERGKEEK back to topmRNA from alignment at CM002461.1:905559..908574+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3660 ID=rna3660|Name=rna3660|organism=Nannochloropsis gaditana|type=mRNA|length=3016bp|location=Sequence derived from alignment at CM002461.1:905559..908574+ (Nannochloropsis gaditana) TAGTGGGCAGTGACACATCGTCGAGCCAGTCTGCTTGTCAATTTAGGGCA
TTTGCGAACGCATGTGATGTAAAGGATGCTGGTTTTTTTCATTGATGACC
ACTATTGTCTAGGACACTTTGTCAGAAAGGGAtgccctcttgctccttga
AGCATGGGCTATGAAGGAGTGGCCTTCCACCAACTTGATGTCTCTACTCA
CGAATAACGGAGGTTTTGCATTTCATCgatccccttttctcccgttCTTC
TAACTGCAGGAAACACAGAAGTTGTTTCTGGAAGTCGATTGACATGGGTA
GTCATCTGGCCAAGCCCATCACCGGTAAGTCGGGTTCCTCCCTTTGGGTC
TGGAATGAGACCAAATAATTCAAGGAGATCAGTGCGAATGAAGTTTGGAG
AATCCATTACTTTTCGAACGCTCGCGTGAAACCACCTTTGCGTCTCAAAA
CGCGTATGAAATGCgtagaagggaagaggtgggTAATATACTCCTGAACC
CTCATTTCTGCCTACCCGCTATCTCCGTGCATTGCCCCACCGCCATGCTT
TATATAGAGAAAGAATCGTACGAGAGTAATGCACATGGGCTAAATTTTGG
GGCAGCCGCGATGCAAGGCTGGcgggtggagatggaagacgCTCACACGG
TGATCGAGACTATGGGTAAGACAAGCGGGTgcctgggaaggagaaggcat
aGTCAACCCCCGAGGCCGAAGCCCTGCTTGCAACAAGGGTCTGGCGTCAA
TGCGCAGGCTGATGACTGCGACCGTAGTGTGAGAAAAGGATTCGAGGATC
TGagagccgggaggaagaggggaaaggaaaacatAGGGGTATCAGGGGCA
GTGTCTTATCAGACAACGCGCTGATTCTCGGTGCCAGATGAAGTGTCCCT
CGATAATCCTCCTTTGTTTCCCGAGGCCATGCGGCTGCCCTGGTCGTCCA
GAGTAGATTGAAGCCGCCCCGCtcacctctcccctccttcccttcatcgG
CCGGGACCTCAGACCCGGAGCTGGAGGGCCACTCTTTCATCGCAGTCTAC
GACGGGCACGGGGGGCAGTACTCCGCCATCTATGCGGGGAAGCACATGGT
GGATTTCGTCAGACGGACGGTAGCTTACACGGAGTACAAGAAAACCAAGG
ACGTGGCCCACCTCCAGGTGAGGTTCTCCCGTGTGTCTAGACCGCCCTGT
CGCTCCTGTTTGGACCCACAGTAAGGAGGCTGCGTCTTCGATTCTTACGA
TTTCCCCGCCTTGGTTGTACGTTGCTCACGGTCCCGAACGGTGCTCTctg
tcgcctccctcttaccTGCTTCTCGTCAAGAGAAGGGCTCCACACGAGCG
ATCCACTTCTGTTCCGAGGGACACTTGACACTCCCCGCTCACCGCTTCTg
gctctcccttcccctcttcctccacccagaCCGCCATCCACTCCGCGTTT
CTGAATCTGGACGAGTCCCTGAAACTCCAAGATGAATTTGTCCACAAGCA
CGATACCAGTGGATGCACGGCCATCTGCGCCATCATCACGCCTTCCCATG
TGGTGGTTGCCAACGCCGGCGACTCTCGCGCGGTCATGTACACTACAAAG
GGCACCCACCAGCTCTCGCGCGACCACAAACCCTACCTGGAGGACGAGCG
GAAGCGGATCGAGAGCGCGGGGGGGATGGTGAGCATGCAGCGTGTCGACG
GGGACTTGGCCCTGTCGCGGTCATTGGGAGACTTCCAATTCAAAGACCGG
TGAGTCCCACGGGGGTCCCGTCACTGCCGCCGTGTGAGGGTGGATTTGGA
TTTATGGTGTCCGAATTAATTTCCGTGTGactctcctgctcctctttttG
CCCATTTTCAACGTTTTGTGGCGTAAGGTGACGCCGCCATGACCTCTCGC
CCCTGAGCGCTCCTGATCCTTATCCCCACCTATCCTCCGCAGAAACCTTC
CCCCCGAACGCCAAAAAGTCACGGCTGTGCCCGAGGTTCAGGTGCATGTA
CGGGATCCGGAGAAGGACTtgtgtctcctcctcgcctgcgaCGGGGTCTG
GGATGTCTGTGAGAGCGCCGAGGCCGGGCGCATCGTCTTCGACATCctgg
gggacggggagaaacGGATGGCCTTGGTCGCGGAGGAGCTCTTGGACCAA
TGCCTGTTGCGGTATTCGAAAGACAATATGTCGGCGGTGGTCGTTGGCTT
TGCCAAGttgtgggaggagcacggcaaggagggagagggggtggagggga
ggcggcgaaggaggctgcctgcgggggaggaggaggaatcgaacgatgga
ggaaaggcgtcagagaggggaaaggaagaaaagtaGGGGCTGGAAGAGCT
GATGTTTTATCGTGAGAGGAGGATCAAGGCCGACACGAGGGGTAAGAAGA
CCATAGATTAGTTGCCTATTTGCCGATAAATTGAACCAGTAATGGCGCGA
GCACCAGGAGCAGCATCCACAGCATTTGCAGCAGCCGTGtcggcaggagg
gggggggtcggtaAGCACATGCCAAGAAAGAGGCCGATGGATGGTGATAT
CCAACGCATGGAGCAGGAaacgagaagaaagagacaaGGAGTGCATGTGG
TATGGACGGGCGTCATCGTGAGCTGGATTGCATGAGCAAACATTCGGGAA
GCGTGCAAGCAAATTGCTTCAACTGATGTGAACACGGCGGTGCGATTCTA
TACGATGGGACAGTTTTGATAAACAGTGAATTCTGATCCCAGCGATAAGA
GATGCGGTCGCGTAAACTTTTCTGGCTGGCATGTGGCTACATTCGAATGG
GAGCCAAGAGGGATGAGCAACAGAGCCTCCCATCCCTGCACTTTTTCTAA
AATTGACAATAGCAACAACTGTTTTGCGAATTTGCCGGAAAGAGTGAAGA
TTAAAGTGTATTTCTCTGCAAGTCCCTCAGTATTATGTGCATGCATGTCA
AAAAATAATTCAAGCCAGCGGGCTCGATAGCCCAAAAGAAACACAAAACT
ATCAAGAGCGCGGAGA back to topCoding sequence (CDS) from alignment at CM002461.1:905559..908574+ >rna3660 ID=rna3660|Name=rna3660|organism=Nannochloropsis gaditana|type=CDS|length=5040bp|location=Sequence derived from alignment at CM002461.1:905559..908574+ (Nannochloropsis gaditana) ATGGGTAGTCATCTGGCCAAGCCCATCACCGAGAAAGAATCGTACGAGAG TAATGCACATGGGCTAAATTTTGGGGCAGCCGCGATGCAAGGCTGGcggg tggagatggaagacgCTCACACGGTGATCGAGACTATGGACCCGGAGCTG GAGGGCCACTCTTTCATCGCAGTCTACGACGGGCACGGGGGGCAGTACTC CGCCATCTATGCGGGGAAGCACATGGTGGATTTCGTCAGACGGACGGTAG CTTACACGGAGTACAAGAAAACCAAGGACGTGGCCCACCTCCAGaCCGCC ATCCACTCCGCGTTTCTGAATCTGGACGAGTCCCTGAAACTCCAAGATGA ATTTGTCCACAAGCACGATACCAGTGGATGCACGGCCATCTGCGCCATCA TCACGCCTTCCCATGTGGTGGTTGCCAACGCCGGCGACTCTCGCGCGGTC ATGTACACTACAAAGGGCACCCACCAGCTCTCGCGCGACCACAAACCCTA CCTGGAGGACGAGCGGAAGCGGATCGAGAGCGCGGGGGGGATGGTGAGCA TGCAGCGTGTCGACGGGGACTTGGCCCTGTCGCGGTCATTGGGAGACTTC CAATTCAAAGACCGAAACCTTCCCCCCGAACGCCAAAAAGTCACGGCTGT GCCCGAGGTTCAGGTGCATGTACGGGATCCGGAGAAGGACTtgtgtctcc tcctcgcctgcgaCGGGGTCTGGGATGTCTGTGAGAGCGCCGAGGCCGGG CGCATCGTCTTCGACATCctgggggacggggagaaacGGATGGCCTTGGT CGCGGAGGAGCTCTTGGACCAATGCCTGTTGCGGTATTCGAAAGACAATA TGTCGGCGGTGGTCGTTGGCTTTGCCAAGttgtgggaggagcacggcaag gagggagagggggtggaggggaggcggcgaaggaggctgcctgcggggga ggaggaggaatcgaacgatggaggaaaggcgtcagagaggggaaaggaag aaaagtaGATGGGTAGTCATCTGGCCAAGCCCATCACCGAGAAAGAATCG TACGAGAGTAATGCACATGGGCTAAATTTTGGGGCAGCCGCGATGCAAGG CTGGcgggtggagatggaagacgCTCACACGGTGATCGAGACTATGGACC CGGAGCTGGAGGGCCACTCTTTCATCGCAGTCTACGACGGGCACGGGGGG CAGTACTCCGCCATCTATGCGGGGAAGCACATGGTGGATTTCGTCAGACG GACGGTAGCTTACACGGAGTACAAGAAAACCAAGGACGTGGCCCACCTCC AGaCCGCCATCCACTCCGCGTTTCTGAATCTGGACGAGTCCCTGAAACTC CAAGATGAATTTGTCCACAAGCACGATACCAGTGGATGCACGGCCATCTG CGCCATCATCACGCCTTCCCATGTGGTGGTTGCCAACGCCGGCGACTCTC GCGCGGTCATGTACACTACAAAGGGCACCCACCAGCTCTCGCGCGACCAC AAACCCTACCTGGAGGACGAGCGGAAGCGGATCGAGAGCGCGGGGGGGAT GGTGAGCATGCAGCGTGTCGACGGGGACTTGGCCCTGTCGCGGTCATTGG GAGACTTCCAATTCAAAGACCGAAACCTTCCCCCCGAACGCCAAAAAGTC ACGGCTGTGCCCGAGGTTCAGGTGCATGTACGGGATCCGGAGAAGGACTt gtgtctcctcctcgcctgcgaCGGGGTCTGGGATGTCTGTGAGAGCGCCG AGGCCGGGCGCATCGTCTTCGACATCctgggggacggggagaaacGGATG GCCTTGGTCGCGGAGGAGCTCTTGGACCAATGCCTGTTGCGGTATTCGAA AGACAATATGTCGGCGGTGGTCGTTGGCTTTGCCAAGttgtgggaggagc acggcaaggagggagagggggtggaggggaggcggcgaaggaggctgcct gcgggggaggaggaggaatcgaacgatggaggaaaggcgtcagagagggg aaaggaagaaaagtaGATGGGTAGTCATCTGGCCAAGCCCATCACCGAGA AAGAATCGTACGAGAGTAATGCACATGGGCTAAATTTTGGGGCAGCCGCG ATGCAAGGCTGGcgggtggagatggaagacgCTCACACGGTGATCGAGAC TATGGACCCGGAGCTGGAGGGCCACTCTTTCATCGCAGTCTACGACGGGC ACGGGGGGCAGTACTCCGCCATCTATGCGGGGAAGCACATGGTGGATTTC GTCAGACGGACGGTAGCTTACACGGAGTACAAGAAAACCAAGGACGTGGC CCACCTCCAGaCCGCCATCCACTCCGCGTTTCTGAATCTGGACGAGTCCC TGAAACTCCAAGATGAATTTGTCCACAAGCACGATACCAGTGGATGCACG GCCATCTGCGCCATCATCACGCCTTCCCATGTGGTGGTTGCCAACGCCGG CGACTCTCGCGCGGTCATGTACACTACAAAGGGCACCCACCAGCTCTCGC GCGACCACAAACCCTACCTGGAGGACGAGCGGAAGCGGATCGAGAGCGCG GGGGGGATGGTGAGCATGCAGCGTGTCGACGGGGACTTGGCCCTGTCGCG GTCATTGGGAGACTTCCAATTCAAAGACCGAAACCTTCCCCCCGAACGCC AAAAAGTCACGGCTGTGCCCGAGGTTCAGGTGCATGTACGGGATCCGGAG AAGGACTtgtgtctcctcctcgcctgcgaCGGGGTCTGGGATGTCTGTGA GAGCGCCGAGGCCGGGCGCATCGTCTTCGACATCctgggggacggggaga aacGGATGGCCTTGGTCGCGGAGGAGCTCTTGGACCAATGCCTGTTGCGG TATTCGAAAGACAATATGTCGGCGGTGGTCGTTGGCTTTGCCAAGttgtg ggaggagcacggcaaggagggagagggggtggaggggaggcggcgaagga ggctgcctgcgggggaggaggaggaatcgaacgatggaggaaaggcgtca gagaggggaaaggaagaaaagtaGATGGGTAGTCATCTGGCCAAGCCCAT CACCGAGAAAGAATCGTACGAGAGTAATGCACATGGGCTAAATTTTGGGG CAGCCGCGATGCAAGGCTGGcgggtggagatggaagacgCTCACACGGTG ATCGAGACTATGGACCCGGAGCTGGAGGGCCACTCTTTCATCGCAGTCTA CGACGGGCACGGGGGGCAGTACTCCGCCATCTATGCGGGGAAGCACATGG TGGATTTCGTCAGACGGACGGTAGCTTACACGGAGTACAAGAAAACCAAG GACGTGGCCCACCTCCAGaCCGCCATCCACTCCGCGTTTCTGAATCTGGA CGAGTCCCTGAAACTCCAAGATGAATTTGTCCACAAGCACGATACCAGTG GATGCACGGCCATCTGCGCCATCATCACGCCTTCCCATGTGGTGGTTGCC AACGCCGGCGACTCTCGCGCGGTCATGTACACTACAAAGGGCACCCACCA GCTCTCGCGCGACCACAAACCCTACCTGGAGGACGAGCGGAAGCGGATCG AGAGCGCGGGGGGGATGGTGAGCATGCAGCGTGTCGACGGGGACTTGGCC CTGTCGCGGTCATTGGGAGACTTCCAATTCAAAGACCGAAACCTTCCCCC CGAACGCCAAAAAGTCACGGCTGTGCCCGAGGTTCAGGTGCATGTACGGG ATCCGGAGAAGGACTtgtgtctcctcctcgcctgcgaCGGGGTCTGGGAT GTCTGTGAGAGCGCCGAGGCCGGGCGCATCGTCTTCGACATCctggggga cggggagaaacGGATGGCCTTGGTCGCGGAGGAGCTCTTGGACCAATGCC TGTTGCGGTATTCGAAAGACAATATGTCGGCGGTGGTCGTTGGCTTTGCC AAGttgtgggaggagcacggcaaggagggagagggggtggaggggaggcg gcgaaggaggctgcctgcgggggaggaggaggaatcgaacgatggaggaa aggcgtcagagaggggaaaggaagaaaagtaGATGGGTAGTCATCTGGCC AAGCCCATCACCGAGAAAGAATCGTACGAGAGTAATGCACATGGGCTAAA TTTTGGGGCAGCCGCGATGCAAGGCTGGcgggtggagatggaagacgCTC ACACGGTGATCGAGACTATGGACCCGGAGCTGGAGGGCCACTCTTTCATC GCAGTCTACGACGGGCACGGGGGGCAGTACTCCGCCATCTATGCGGGGAA GCACATGGTGGATTTCGTCAGACGGACGGTAGCTTACACGGAGTACAAGA AAACCAAGGACGTGGCCCACCTCCAGaCCGCCATCCACTCCGCGTTTCTG AATCTGGACGAGTCCCTGAAACTCCAAGATGAATTTGTCCACAAGCACGA TACCAGTGGATGCACGGCCATCTGCGCCATCATCACGCCTTCCCATGTGG TGGTTGCCAACGCCGGCGACTCTCGCGCGGTCATGTACACTACAAAGGGC ACCCACCAGCTCTCGCGCGACCACAAACCCTACCTGGAGGACGAGCGGAA GCGGATCGAGAGCGCGGGGGGGATGGTGAGCATGCAGCGTGTCGACGGGG ACTTGGCCCTGTCGCGGTCATTGGGAGACTTCCAATTCAAAGACCGAAAC CTTCCCCCCGAACGCCAAAAAGTCACGGCTGTGCCCGAGGTTCAGGTGCA TGTACGGGATCCGGAGAAGGACTtgtgtctcctcctcgcctgcgaCGGGG TCTGGGATGTCTGTGAGAGCGCCGAGGCCGGGCGCATCGTCTTCGACATC ctgggggacggggagaaacGGATGGCCTTGGTCGCGGAGGAGCTCTTGGA CCAATGCCTGTTGCGGTATTCGAAAGACAATATGTCGGCGGTGGTCGTTG GCTTTGCCAAGttgtgggaggagcacggcaaggagggagagggggtggag gggaggcggcgaaggaggctgcctgcgggggaggaggaggaatcgaacga tggaggaaaggcgtcagagaggggaaaggaagaaaagtaG back to top
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