EWM27021.1, cds3651 (CDS) Nannochloropsis gaditana

Overview
NameEWM27021.1
Unique Namecds3651
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:905852..905882 +
Alignment locationCM002461.1:906116..906223 +
Alignment locationCM002461.1:906571..906725 +
Alignment locationCM002461.1:906988..907307 +
Alignment locationCM002461.1:907501..907894 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27021.1
Productprotein phosphatase 1a isoform 2
Orig transcript idgnl|cribi|Naga_100309g4.7055.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:905852..905882 +
CM002461.1supercontigCM002461.1:906116..906223 +
CM002461.1supercontigCM002461.1:906571..906725 +
CM002461.1supercontigCM002461.1:906988..907307 +
CM002461.1supercontigCM002461.1:907501..907894 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005488binding
GO:0043169cation binding
GO:0004722protein serine/threonine phosphatase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006470protein dephosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR000222PP2C_BS
IPR015655PP2C
IPR001932PPM-type_phosphatase_dom
Homology
BLAST of EWM27021.1 vs. NCBI_GenBank
Match: gi|585109193|gb|EWM27021.1| (protein phosphatase 1a isoform 2 [Nannochloropsis gaditana])

HSP 1 Score: 694.501 bits (1791), Expect = 0.000e+0
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0
Query:    1 MGSHLAKPITEKESYESNAHGLNFGAAAMQGWRVEMEDAHTVIETMDPELEGHSFIAVYDGHGGQYSAIYAGKHMVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEEEESNDGGKASERGKEEK 335
            MGSHLAKPITEKESYESNAHGLNFGAAAMQGWRVEMEDAHTVIETMDPELEGHSFIAVYDGHGGQYSAIYAGKHMVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEEEESNDGGKASERGKEEK
Sbjct:    1 MGSHLAKPITEKESYESNAHGLNFGAAAMQGWRVEMEDAHTVIETMDPELEGHSFIAVYDGHGGQYSAIYAGKHMVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEEEESNDGGKASERGKEEK 335          
BLAST of EWM27021.1 vs. NCBI_GenBank
Match: gi|585109194|gb|EWM27022.1| (protein phosphatase 1a isoform 2 [Nannochloropsis gaditana])

HSP 1 Score: 538.495 bits (1386), Expect = 0.000e+0
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
Query:   75 MVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEEEESNDGGKASERGKEEK 335
            MVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEEEESNDGGKASERGKEEK
Sbjct:    1 MVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEEEESNDGGKASERGKEEK 261          
BLAST of EWM27021.1 vs. NCBI_GenBank
Match: gi|299471855|emb|CBN77025.1| (protein phosphatase, putative [Ectocarpus siliculosus])

HSP 1 Score: 289.271 bits (739), Expect = 7.298e-93
Identity = 158/325 (48.62%), Postives = 219/325 (67.38%), Query Frame = 0
Query:    1 MGSHLAKPITEKESYES-NAHGLNFGAAAMQGWRVEMEDAHTVIETMDPELEGHSFIAVYDGHGGQYSAIYAGKHMVDFVRRTVAYTEYKKT--KDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEEEESN 322
            MG+ L KP+TEKE+     ++GL FGA+AMQGWRV+MED+HT++  +   LEGHSF+AV+DGHGG   A YAG++M+  V  T  + EY ++  KD   L+ A+++AFL  D S+K   +   + D SG TA+ + +TP+HVV+A+AGDSRAV+ + +     + DHKPY + ER RIE AGG+VSM+RVDGDLA+SR+LGDFQ+KD  LPPE  KV+  PE +   R P+ +  L++ACDG+WDV    +  + V +I  +GE  M L  EE+LD      S+DNMSAV+V F  L  +  + G+GV GRR +R  A E+ ESN
Sbjct:    1 MGTLLDKPVTEKETETETGSNGLEFGASAMQGWRVDMEDSHTIVANV-AGLEGHSFVAVFDGHGGALCAAYAGENMMRHVMETAEFAEYAESTEKDTTVLEKALYAAFLACDRSVKASQDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAVATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDDALPPEECKVSPAPETRSFPRSPQDEF-LVVACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDM----GSRDNMSAVLVAFPGL--KRSETGKGVAGRRAQR--AAEDSESN 315          
BLAST of EWM27021.1 vs. NCBI_GenBank
Match: gi|1173954910|gb|OQS02034.1| (phosphatase 2C [Thraustotheca clavata])

HSP 1 Score: 257.684 bits (657), Expect = 9.773e-81
Identity = 142/319 (44.51%), Postives = 194/319 (60.82%), Query Frame = 0
Query:    1 MGSHLAKPITEKESYESNAHGLNFGAAAMQGWRVEMEDAHTVIETMDPELEGHSFIAVYDGHGGQYSAIYAGKHMVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDR-NLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEE 318
            MG+ L+ PITEKE++    +GL +  + MQGWR  MEDAH +  T+ P     S  AV+DGHGG+  A ++   + + + +   +    K KD   +  A+  AFL LDE  +   + V   D SGCTAI A +TP+H++VAN+GDSR+V+ T      +S DHKP  E ER RIE+AGG V   RV+GDLA+SR+LGDF +K R +L PE Q+V+A P+++   R  E +  L+LACDG+WDV  + +A   V  ++  GE  M L+ EELLD CL   S+DNMS V+V FA         GEGV G R+ R  A EE
Sbjct:    1 MGNFLSSPITEKETHVGMGNGLAYAVSCMQGWRATMEDAH-IARTVIPSFGDCSIFAVFDGHGGKLIADHSAMSLTEVLEK---HNNVGKEKDPNEIGKAMGKAFLELDEKHRALTQIVSGEDHSGCTAIAAFVTPTHIIVANSGDSRSVLSTGGTVVPMSFDHKPNNEKERMRIENAGGSVRNNRVNGDLAVSRALGDFVYKQRSDLKPEEQQVSAEPDIKTQHRSKEDEF-LILACDGIWDVMTNDDACDFVRSLMNKGESNMGLICEELLDHCLQLGSRDNMSVVIVKFAG---AKIGTGEGVMGLRKAREKAIEE 311          
BLAST of EWM27021.1 vs. NCBI_GenBank
Match: gi|301105313|ref|XP_002901740.1| (protein phosphatase 2C, putative [Phytophthora infestans T30-4] >gi|262099078|gb|EEY57130.1| protein phosphatase 2C, putative [Phytophthora infestans T30-4])

HSP 1 Score: 258.07 bits (658), Expect = 1.131e-80
Identity = 144/332 (43.37%), Postives = 208/332 (62.65%), Query Frame = 0
Query:    1 MGSHLAKPITEKESYESNAHGLNFGAAAMQGWRVEMEDAHTVIETMDPE--LEGHSFIAVYDGHGGQYSAIYAG----KHMVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDR-NLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGF--AKLWEEHGKEGEGVEGRRRRRLPAGEEEESND 323
            MG+ LA PIT+K++     +GL+FG A MQGWR  MEDAH  +  ++PE   +G S  AV+DGHGG+ +A  A     K +   ++  V         D A +  A+  AF+NLD++++   +  +  D SGCTAI A++TP+H++VAN+GDSR+VM     T ++S DHKP    ERKRI+ AGG+V   RV+GDLA+SR+LGDF +K R +LP E+Q+V+A P+++V   D  ++  L+LACDG+WDV  + E    V  ++ +GE  + L+AEE+LD CL   S+DNMSAV+V F  AKL    G  G   + R  R      E+++ND
Sbjct:    1 MGNFLATPITDKDTDGGEGNGLSFGLATMQGWRTGMEDAH--VAQINPEGLPQGCSLFAVFDGHGGRLAADLAAEGIEKELSAVMKNDVFPNGKADDADPAKIGKAMRDAFMNLDQNIRKTFDESYGSDQSGCTAIAALVTPTHIIVANSGDSRSVMAKNGRTVEMSFDHKPINAGERKRIQDAGGLVRSNRVNGDLAVSRALGDFSYKARADLPAEQQQVSAEPDIEVQKIDKTEEF-LVLACDGIWDVMSNDEICAFVRQLMSNGETDLKLIAEEILDNCLRAGSRDNMSAVIVKFPGAKL----GSGGGVAKIREERARLEKAEQDTND 325          
BLAST of EWM27021.1 vs. NCBI_GenBank
Match: gi|568022442|gb|ETL96512.1| (hypothetical protein L917_06009 [Phytophthora parasitica] >gi|568052805|gb|ETM49668.1| hypothetical protein L914_06129 [Phytophthora parasitica])

HSP 1 Score: 257.299 bits (656), Expect = 2.338e-80
Identity = 144/330 (43.64%), Postives = 208/330 (63.03%), Query Frame = 0
Query:    1 MGSHLAKPITEKESYESNAHGLNFGAAAMQGWRVEMEDAHTVIETMDPE--LEGHSFIAVYDGHGGQYSAIYAGKHMVDFVRRTVAYTEYKKTK----DVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDR-NLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGF--AKLWEEHGKEGEGVEGRR--RRRLPAGEEE 319
            MG+ LA PIT+K++     +GL+FG A MQGWR  MEDAH  +  ++PE   +G S  AV+DGHGG+ +A  A + +   +  T+    +   K    D A +  A+  AF+NLD++++   +  +  D SGCTAI A++TP+H++VAN+GDSR+VM     T ++S DHKP    ERKRI+ AGG+V   RV+GDLA+SR+LGDF +K R +LP E+Q+V+A P+++V   D  ++  L+LACDG+WDV  + E    +  ++ +GE  + L+AEE+LD CL   S+DNMS V+V F  AKL       G GV   R  R RL   E+E
Sbjct:    1 MGNFLATPITDKDTDGGEGNGLSFGLATMQGWRTGMEDAH--VAQINPEGLPQGCSLFAVFDGHGGRLAADLAAEGIAKELSATMKNGVFPNGKADDADPAKIGKAMRDAFMNLDQNIRKTFDESYGSDQSGCTAIAALVTPTHIIVANSGDSRSVMAKNGRTVEMSFDHKPINAGERKRIQDAGGLVRSNRVNGDLAVSRALGDFSYKARADLPAEQQQVSAEPDIEVQKIDKTEEF-LVLACDGIWDVMSNDELCAYIRQLMNNGESDLKLIAEEVLDNCLRAGSRDNMSVVIVKFPGAKLG-----SGGGVAKIREERARLEKAEQE 322          
BLAST of EWM27021.1 vs. NCBI_GenBank
Match: gi|675165751|ref|XP_008891760.1| (hypothetical protein PPTG_02437 [Phytophthora parasitica INRA-310] >gi|566027124|gb|ETI50035.1| hypothetical protein F443_06319 [Phytophthora parasitica P1569] >gi|567964436|gb|ETK89922.1| hypothetical protein L915_06193 [Phytophthora parasitica] >gi|567993137|gb|ETL43320.1| hypothetical protein L916_06131 [Phytophthora parasitica] >gi|568107889|gb|ETN22513.1| hypothetical protein PPTG_02437 [Phytophthora parasitica INRA-310] >gi|570330831|gb|ETO78779.1| hypothetical protein F444_06382 [Phytophthora parasitica P1976] >gi|570954546|gb|ETP19803.1| hypothetical protein F441_06327 [Phytophthora parasitica CJ01A1] >gi|570989557|gb|ETP47760.1| hypothetical protein F442_06362 [Phytophthora parasitica P10297] >gi|970636074|gb|KUF80808.1| phosphatase 1A protein [Phytophthora nicotianae])

HSP 1 Score: 257.299 bits (656), Expect = 2.999e-80
Identity = 144/330 (43.64%), Postives = 208/330 (63.03%), Query Frame = 0
Query:    1 MGSHLAKPITEKESYESNAHGLNFGAAAMQGWRVEMEDAHTVIETMDPE--LEGHSFIAVYDGHGGQYSAIYAGKHMVDFVRRTVAYTEYKKTK----DVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDR-NLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGF--AKLWEEHGKEGEGVEGRR--RRRLPAGEEE 319
            MG+ LA PIT+K++     +GL+FG A MQGWR  MEDAH  +  ++PE   +G S  AV+DGHGG+ +A  A + +   +  T+    +   K    D A +  A+  AF+NLD++++   +  +  D SGCTAI A++TP+H++VAN+GDSR+VM     T ++S DHKP    ERKRI+ AGG+V   RV+GDLA+SR+LGDF +K R +LP E+Q+V+A P+++V   D  ++  L+LACDG+WDV  + E    +  ++ +GE  + L+AEE+LD CL   S+DNMS V+V F  AKL       G GV   R  R RL   E+E
Sbjct:    1 MGNFLATPITDKDTDGGEGNGLSFGLATMQGWRTGMEDAH--VAQINPEGLPQGCSLFAVFDGHGGRLAADLAAEGIAKELSATMKNGVFPNGKADDADPAKIGKAMRDAFMNLDQNIRKTFDESYGSDQSGCTAIAALVTPTHIIVANSGDSRSVMAKNGRTVEMSFDHKPINAGERKRIQDAGGLVRSNRVNGDLAVSRALGDFSYKARADLPAEQQQVSAEPDIEVQKIDKTEEF-LVLACDGIWDVMSNDELCAYIRQLMNNGESDLKLIAEEVLDNCLRAGSRDNMSVVIVKFPGAKLG-----SGGGVAKIREERARLEKAEQE 322          
BLAST of EWM27021.1 vs. NCBI_GenBank
Match: gi|953503746|emb|CEG35312.1| (protein phosphatase [Plasmopara halstedii])

HSP 1 Score: 256.529 bits (654), Expect = 5.035e-80
Identity = 145/334 (43.41%), Postives = 206/334 (61.68%), Query Frame = 0
Query:    1 MGSHLAKPITEKESYESNAHGLNFGAAAMQGWRVEMEDAHTVIETMDPE--LEGHSFIAVYDGHGGQYSAIYAG----KHMVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDR-NLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGF--AKLWEEHGKEGEGVEGRR--RRRLPAGEEEESND 323
            MG+ L  PITEK++     +GL FG A MQGWR  MEDAH  +  ++PE   +G S  AV+DGHGG+ +A  A     K     ++  +      +  D   +  A+  AF+NLD++++   +  +  D SGCTAI A++TP+H++VAN+GDSR+VM     T ++S DHKP   +ERKRIE AGG+V   RV+GDLA+SR+LGDF +K R +LP E+Q+V+A PE+QV   +  ++  L+LACDG+WDV  + E    +  ++ DGE  + L+AEE+LD CL   S+DNMS V+V F  AK       +G GV   R  R RL   E+ +S D
Sbjct:    1 MGNFLTTPITEKDTDGGEGNGLFFGLATMQGWRTGMEDAH--VAQINPEGLPQGCSLFAVFDGHGGRLAADLAAEGITKEFAAVMKSDIFPGGKAEGADPKKIGKAMRDAFMNLDQNIRKTFDENYASDQSGCTAITALVTPTHIIVANSGDSRSVMAKGGRTVEMSFDHKPINAEERKRIEQAGGLVRSNRVNGDLAVSRALGDFSYKARADLPAEKQQVSAEPEIQVQKIEKTEEF-LVLACDGIWDVMSNDEICAYIRQLMNDGEMDLKLIAEEILDNCLRAGSRDNMSVVIVKFPGAKFG-----QGGGVSKIREERARLEMAEQNKSGD 326          
BLAST of EWM27021.1 vs. NCBI_GenBank
Match: gi|673027204|ref|XP_008867563.1| (hypothetical protein H310_04828 [Aphanomyces invadans] >gi|574476336|gb|ETW03334.1| hypothetical protein H310_04828 [Aphanomyces invadans])

HSP 1 Score: 256.144 bits (653), Expect = 7.685e-80
Identity = 141/316 (44.62%), Postives = 195/316 (61.71%), Query Frame = 0
Query:    1 MGSHLAKPITEKESYESNAHGLNFGAAAMQGWRVEMEDAHTVIETMDPELEGHSFIAVYDGHGGQYSAIYAGKHMVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTT-KGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDR-NLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGF--AKLWEEHGKEGEGVEGRRRRR 312
            MG+ L+ P T+K ++    +G+++G + MQGWR  MEDAH V ET  P   G S  AV+DGHGG   A  +   +VD + +     ++K   D   +  A+ +AFL LD  L+      +  D SGCTAI AI+T +H++VAN+GDSR+V+ T       +S DHKP    E+ RIE+AGGMV   RV+GDLA+SR+LGD+ FK+R +L PE Q+V+  P++++  R    +  LLLACDGVWDV  + EA   V  ++  GE+ M L+ EELLD CL   S+DNMS V+V F  AK       EGEGV G R++R
Sbjct:    1 MGNFLSSPKTDKITHVGTGNGISYGVSCMQGWRTTMEDAH-VAETTIPAFAGSSLFAVFDGHGGNLVAEESALRLVDTLAKGQGNNQHKNEPDA--IGAALRNAFLTLDNDLRKLQRVENGEDQSGCTAIAAIVTDTHIIVANSGDSRSVLATCGDAVEPMSFDHKPNNPREKLRIENAGGMVRNNRVNGDLAVSRALGDYYFKERHDLAPEEQQVSPEPDIKIEARSAANEF-LLLACDGVWDVLSNEEACDFVRSVMKLGERDMGLICEELLDHCLSLDSRDNMSVVLVAFDGAKF-----GEGEGVYGLRKQR 307          
BLAST of EWM27021.1 vs. NCBI_GenBank
Match: gi|1214712845|gb|OWZ23765.1| (Protein phosphatase 2C [Phytophthora megakarya])

HSP 1 Score: 255.373 bits (651), Expect = 1.226e-79
Identity = 144/334 (43.11%), Postives = 210/334 (62.87%), Query Frame = 0
Query:    1 MGSHLAKPITEKESYESNAHGLNFGAAAMQGWRVEMEDAHTVIETMDPE--LEGHSFIAVYDGHGGQYSAIYAGKHMVDFVRRTVAYTEYKKTK----DVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDR-NLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGF--AKLWEEHGKEGEGVEGRR--RRRLPAGEEEESND 323
            MG+ LA PITEK++     +GL+FG A MQGWR  MEDAH  +  ++P+   +G S  AV+DGHGG+ +A  A + +   +   +    +   K    D  ++  A+  AF+NLD++++   +  +  D SGCTAI A++TP+H++VAN+GDSR+VM     T ++S DHKP    ERKRI+ AGG+V   RV+GDLA+SR+LGDF +K R +LP E+Q+V+A P+++V   D  ++  L+LACDG+WDV  + E    +  ++ +GEK + L+AEE+LD CL   S+DNMS V+V F  AKL      +G GV   R  R RL   E E + D
Sbjct:    1 MGNFLATPITEKDTEGGEGNGLSFGLATMQGWRTGMEDAH--VAQINPQGLPQGCSLFAVFDGHGGRLAADLAAERITQQLASVMKSDVFPGGKAEGADPHNIGKAMRDAFMNLDQNIRETFDKNYGSDQSGCTAIAALVTPTHIIVANSGDSRSVMAKDGRTVEMSFDHKPINVRERKRIQDAGGLVRSNRVNGDLAVSRALGDFSYKARADLPAEQQQVSAEPDIEVQKIDKTEEF-LVLACDGIWDVMSNDELCAYIRQLMNNGEKDLKLIAEEILDNCLRAGSRDNMSVVIVKFPGAKLG-----QGGGVAKIREERARLEKAEREANGD 326          
The following BLAST results are available for this feature:
BLAST of EWM27021.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109193|gb|EWM27021.1|0.000e+0100.00protein phosphatase 1a isoform 2 [Nannochloropsis ... [more]
gi|585109194|gb|EWM27022.1|0.000e+0100.00protein phosphatase 1a isoform 2 [Nannochloropsis ... [more]
gi|299471855|emb|CBN77025.1|7.298e-9348.62protein phosphatase, putative [Ectocarpus siliculo... [more]
gi|1173954910|gb|OQS02034.1|9.773e-8144.51phosphatase 2C [Thraustotheca clavata][more]
gi|301105313|ref|XP_002901740.1|1.131e-8043.37protein phosphatase 2C, putative [Phytophthora inf... [more]
gi|568022442|gb|ETL96512.1|2.338e-8043.64hypothetical protein L917_06009 [Phytophthora para... [more]
gi|675165751|ref|XP_008891760.1|2.999e-8043.64hypothetical protein PPTG_02437 [Phytophthora para... [more]
gi|953503746|emb|CEG35312.1|5.035e-8043.41protein phosphatase [Plasmopara halstedii][more]
gi|673027204|ref|XP_008867563.1|7.685e-8044.62hypothetical protein H310_04828 [Aphanomyces invad... [more]
gi|1214712845|gb|OWZ23765.1|1.226e-7943.11Protein phosphatase 2C [Phytophthora megakarya][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3660rna3660Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications