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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100309g7.7057.mrna |
| Orig protein id | gnl|cribi|Naga_100309g7.7057 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:898232..899782 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3656 ID=rna3656|Name=rna3656|organism=Nannochloropsis gaditana|type=mRNA|length=1613bp
CTACCGTCACAAGGCTCTTCGACACGGTACAAGGTCCTTTGGGGCCAATT
ATGTCAGAGCCTGCGGCTCCCTCCCTCCTCTCCCAAGTGCTCGCACGGTC
GGCCTCCTTGCCCAGCCCCGTGACCTCGACAATCGTCTCCGGCGCCTCGG
GGGGCTCCGAGGCCATCGGCGGGAGGAGCCAGAGAGACGGCGGGGCGGGT
TACGTTTACAGGCGGAGTCGTACCGCACTCACCCCGCGTCGACTCACTCA
AGAGGAGGAAACCGCGCTCTGTGGGGCTCCTCTGGCCTTTCCGGACGAGG
AAATGGAGGGCGTGTCCCTCTTCGGTAAAGCCTCCGACCCGGCGGAGACC
TTCCCCCCCCCGCGCCCCCCGCAAAGGCCGTGCATCCCCCTGGGCCTGAG
GACGGTCATTCCTTCGCTTCCCTACCCGATCTCACCCGGCGCACACACAA
CATGGTCCTGTCGTCCCCTCCCCAGGATCCGGTGGTCCCCTCAAGCCCTG
TCCGCGACTCGCTCCTTCGACGGTCGCTCTCCCAGCCTGCCCCCCCCCCT
CCGCCCTCCCAGACCTCCCCAATGCTGAGCGTGCTCGACACCCCCCGATG
CACGGGCGGAGGAGAAGCGGCTGTCACCCCGGGGAAGGAGATGGAGACGG
ACGCAAGCAGTGGACGGCGCGAAAGGGACAAGACTACGGGTGGGACTCCC
AGCACGGGCCCTTCCAACGCGTCGGTCCGCACCGTTACCTTCGCAGCGCC
CACCCCTGCAACCCCCCTTTCCCCCCCTTGCCCCGAAGGACAAGCACCAA
AACCCAAGCACCGCGTCGGCAGCAACTTTAAAAAGTTCTTTCGCCTACCC
CGGCTCGGGCGCTCTCCCACCACTTCCCCCCTCTCCCCTCCCACTTCTTC
GTTGACTCACGTACCGGGCTCGCCGCAGTCGCAGCTGCCGCAGCAACAGC
AGCCTCCACAGCAGCATATCACTCGCCCTTCTCCGTTTCCTTTTCCTTTC
CGAAGGAGCGAAACCAAAATGTCCGCTGCTGTCGTTACCTCCTCCGCCTC
GAAGGAACTCTCGAGCATTCCTCCTCCTCGTCGTGCCGTCCCATCCTCTC
TCTCCTCCTCCTCCCTCTCCTCCTCCTCCTCCTCCTCTTCCCCTTCTTCT
TCTTCCCCCTCCTCGTCAGCACGTGCATTCTCCTCGGAAAGAGCGATAGA
CTCTCCAACTTCCTGGCCCTCCCCCTCTCCTGAGTTGAGAGACCGGCTCC
AGCTTTTTACGAGACGCTTATCGCGCACAACGAACCGTTGAAAGAATGCA
ATTTGAACGCTTGAATCTCGGTGTACAGATTTCTGACAATAAACGTGATG
TAAGTGGCTTAACAATTAACATGCAGCGGACATGAGCATAGTAAGGGAGG
GAAGGCCACAGAGACCCGGGGCGATTTAACACGGACATTGCAAAGGCTAG
CAGATGTATGGCTTAAAGCACGAGTCCGTGACGAATGATTTGAGGGTTGA
AGAGCACTGACAGGGGCAAAAAGAAGCTCACAAAATGGGTCCCTCTTGCA
CTGTTGCGAATTGATACTTTTTTTGGTAGACTCTCCGAGACCGGTGAGGC
AGTGGTGCAATGA back to topprotein sequence of rna3656 >rna3656-protein ID=rna3656-protein|Name=rna3656|organism=Nannochloropsis gaditana|type=polypeptide|length=129bp
MHNKVLLLVSSLTSDAVQEKEQRRARSLLEAKGTVFEEIDGADPLMTEKR
NQLFGLGHTARYPQFFIEREDGKVTYVGGWEEVEAMNECSDMPVEVLRAN
PQIQTFDMVFAHVQRRKRSSVAAVPVASS back to topmRNA from alignment at CM002461.1:898232..899782- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3656 ID=rna3656|Name=rna3656|organism=Nannochloropsis gaditana|type=mRNA|length=1551bp|location=Sequence derived from alignment at CM002461.1:898232..899782- (Nannochloropsis gaditana)
CTTGGTTGGAAAGGCCCCTTCACAGCCACCTTTGTGCCCGCTATCCGCGC
CAACATGCGACAACACACGTCATGCACGGTCTACGTCCATGGTCTATCGC
CCTATGCAAGGTCATGAGGTCCCGCGAGAAGAGTTGATGTCTCTTTCGCA
CTCCAGCTAGCGCAGGAGGGCAGGATGGGGAGGGAAGAACGATCTGTCAA
TTCGCAGGGGCCAAAACCTTCACATATATGTGTACCATTCACACCAATAG
CCTGCCCTCATTTCATTCTTTGCAGTGCACATCCGAGCCAAGGACTGGCC
GGAAGGATCAAGGTTCAGAAGCGCAGCCGTCTGACAGGCGACGCCCCCAA
GTCGGCAATAGTAACGTGTCCACACTCAGACACAAAGATCCTTACACAGG
CGAGGAAAAGTGTGTCTTCCCAATTTTCTTACCTTGACCTATACCAAAGA
CGAGCTTATGCACAATAAGGTAGGGGCAGAGAGGGCCGTGTTTCTCATCC
CTCGGCTTTTTGCTTTGTCTTTCTCGCCTCTTCTCTACCGTCCTTCCTGC
TTCCAGATGGGTACGATACCTTGCATGTCTTTTTCTCCGGTTTTATGCAC
ATTCGTCTCAGAGGCGCTAAGGGTCAACTTGCTATTGGTTAAAGGGAGGA
ATCCAAACTTACGGGACACTGACGCATTTGACCTCCGTGAAGTCGAACTT
AACGGGCATTGGAAGGCCCTCTCAATAAGGAGTCCAGGGCTGTGACAGCA
TTCTTGGCGAAATTTAGAGCCCGTGCAACTTCTTTGTAATTCATTTTCGA
TTCCATATTCCTTGCCTCATTCTGTTTCTTCGTCAGGTGCTCCTGCTTGT
CTCGAGCTTGACCTCGGATGCCGTCCAAGAGAAGGAGCAGCGCCGGGCCC
GCTCCCTCCTCGAGGCCAAGGGCACCGTGTTCGAAGAAATTGACGGCGCA
GATCCGCTGATGACGGAGAAGAGGAACCAGCTTTTTGGACTGGGCCACAC
GGCGCGCTATCCCCAGTTTTTTATCGAACGGGAGGACGGGAAGGTCACGT
ATGTGGGGGGGTGGGAGGAGGTGGAGGCCATGAATGAATGCAGCGACATG
CCGGTAGAGGTACTGAGGGCCAACCCTCAGATTCAAACCTTTGATATGGT
CTTCGCTCATGTGCAAAGGCGAAAGAGAAGCAGTGTGGCTGCGGTTCCGG
TGGCCTCTTCGTAAGCACGGGACGAGGGAGGAGGGGACAGAGGAGGGGAG
GGCACGCCATGAATAGACGCAGCAGCGTTTAGGGCGAACAAAGTAAGCAA
ATTGGAATGGATCAAGTCGAGGTAGTTGATATTGCAGATGTTGTAGGCGC
TGAGTTGGAGGAAAATGGAAGAGGAAAAAAGCAACTGTAAGTGCTGAATG
CGTTATTAGAAATGCTCATATGAATAGGTGGATGAGTCTGCGTGTAAAGT
AACTCACTCTGTTGATTTTATGTCATTCATTGCACCACTGCCTCACCGGT
CTCGGAGAGTCTACCAAAAAAAGTATCAATTCGCAACAGTGCAAGAGGGA
C back to topCoding sequence (CDS) from alignment at CM002461.1:898232..899782- >rna3656 ID=rna3656|Name=rna3656|organism=Nannochloropsis gaditana|type=CDS|length=780bp|location=Sequence derived from alignment at CM002461.1:898232..899782- (Nannochloropsis gaditana)
GTGCTCCTGCTTGTCTCGAGCTTGACCTCGGATGCCGTCCAAGAGAAGGA
GCAGCGCCGGGCCCGCTCCCTCCTCGAGGCCAAGGGCACCGTGTTCGAAG
AAATTGACGGCGCAGATCCGCTGATGACGGAGAAGAGGAACCAGCTTTTT
GGACTGGGCCACACGGCGCGCTATCCCCAGTTTTTTATCGAACGGGAGGA
CGGGAAGGTCACGTATGTGGGGGGGTGGGAGGAGGTGGAGGCCATGAATG
AATGCAGCGACATGCCGGTAGAGGTACTGAGGGCCAACCCTCAGATTCAA
ACCTTTGATATGGTCTTCGCTCATGTGCAAAGGCGAAAGAGAAGCAGTGT
GGCTGCGGTTCCGGTGGCCTCTTCGTAAATGCACAATAAGGTGCTCCTGC
TTGTCTCGAGCTTGACCTCGGATGCCGTCCAAGAGAAGGAGCAGCGCCGG
GCCCGCTCCCTCCTCGAGGCCAAGGGCACCGTGTTCGAAGAAATTGACGG
CGCAGATCCGCTGATGACGGAGAAGAGGAACCAGCTTTTTGGACTGGGCC
ACACGGCGCGCTATCCCCAGTTTTTTATCGAACGGGAGGACGGGAAGGTC
ACGTATGTGGGGGGGTGGGAGGAGGTGGAGGCCATGAATGAATGCAGCGA
CATGCCGGTAGAGGTACTGAGGGCCAACCCTCAGATTCAAACCTTTGATA
TGGTCTTCGCTCATGTGCAAAGGCGAAAGAGAAGCAGTGTGGCTGCGGTT
CCGGTGGCCTCTTCGTAAATGCACAATAAG back to top
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