EWM27023.1, cds3647 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27023.1 vs. NCBI_GenBank
Match: gi|585109195|gb|EWM27023.1| (hypothetical protein Naga_100309g7 [Nannochloropsis gaditana]) HSP 1 Score: 269.24 bits (687), Expect = 1.920e-91 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
Query: 1 MHNKVLLLVSSLTSDAVQEKEQRRARSLLEAKGTVFEEIDGADPLMTEKRNQLFGLGHTARYPQFFIEREDGKVTYVGGWEEVEAMNECSDMPVEVLRANPQIQTFDMVFAHVQRRKRSSVAAVPVASS 129
MHNKVLLLVSSLTSDAVQEKEQRRARSLLEAKGTVFEEIDGADPLMTEKRNQLFGLGHTARYPQFFIEREDGKVTYVGGWEEVEAMNECSDMPVEVLRANPQIQTFDMVFAHVQRRKRSSVAAVPVASS
Sbjct: 1 MHNKVLLLVSSLTSDAVQEKEQRRARSLLEAKGTVFEEIDGADPLMTEKRNQLFGLGHTARYPQFFIEREDGKVTYVGGWEEVEAMNECSDMPVEVLRANPQIQTFDMVFAHVQRRKRSSVAAVPVASS 129
BLAST of EWM27023.1 vs. NCBI_GenBank
Match: gi|219112055|ref|XP_002177779.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410664|gb|EEC50593.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 91.2781 bits (225), Expect = 2.780e-21 Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = 0
Query: 4 KVLLLVSSLTSDAVQEKEQRRARSLLEAKGTVFEEIDGADPLMTEKRNQLFGL-GHTARYPQFF-IEREDGKVTYVGGWEEVEAMNECSDMPVEVLRANPQIQTFDMVFA 111
+VL+LVS+ + Q + Q RA SLL A+G FE +DGADP E R++LF + G A YPQFF ++ D ++G WE+VEA+N+ S +P +L +NP I T+ V
Sbjct: 8 QVLVLVSNTNFNRGQVQNQNRAVSLLNARGISFETLDGADPTNKELRDKLFEISGVRANYPQFFLVDGSDNIPRFLGDWEKVEALNDASSLPDHILESNPSIVTWQNVLG 117
BLAST of EWM27023.1 vs. NCBI_GenBank
Match: gi|298709089|emb|CBJ31037.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 87.0409 bits (214), Expect = 1.067e-19 Identity = 39/80 (48.75%), Postives = 56/80 (70.00%), Query Frame = 0
Query: 35 VFEEIDGADPLMTEKRNQLFGL-GHTARYPQFFIEREDGKVTYVGGWEEVEAMNECSDMPVEVLRANPQIQTFDMVFAHV 113
+EE+DG+D E RN L+ + GH +YPQ FIER DG++ +VG W +VE++NEC +P E+L ANP+I+TF VF +
Sbjct: 11 TYEEVDGSDAATQEARNNLWTVSGHRGKYPQVFIER-DGELEFVGLWSDVESLNECEALPPEILEANPEIKTFKAVFGDL 89
BLAST of EWM27023.1 vs. NCBI_GenBank
Match: gi|1210515066|dbj|GAX26029.1| (hypothetical protein FisN_4Hu473 [Fistulifera solaris]) HSP 1 Score: 85.8853 bits (211), Expect = 2.271e-19 Identity = 43/105 (40.95%), Postives = 66/105 (62.86%), Query Frame = 0
Query: 7 LLVSSLTSDAVQEKEQRRARSLLEAKGTVFEEIDGADPLMTEKRNQLFGL-GHTARYPQFFIEREDGKVTYVGGWEEVEAMNECSDMPVEVLRANPQIQTFDMVF 110
+L++ L + Q + Q RA LLE +G +E IDGADP E RN+LF + G YPQFF+ E+ V +VG ++ +EAMN+ S +P E+L +P+I T++ +
Sbjct: 1 MLMTGLGMNRAQRQNQERAMHLLEGRGIPYETIDGADPENRETRNKLFSISGRRGTYPQFFLLGEE-SVEFVGDFDTIEAMNDASALPCEILERHPEIMTWEKIL 104
BLAST of EWM27023.1 vs. NCBI_GenBank
Match: gi|223993077|ref|XP_002286222.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977537|gb|EED95863.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 85.5001 bits (210), Expect = 5.818e-19 Identity = 42/111 (37.84%), Postives = 68/111 (61.26%), Query Frame = 0
Query: 4 KVLLLVSSLTSDAVQEKEQRRARSLLEAKGTVFEEIDGADPLMTEKRNQLFGL-GHTARYPQFFIEREDGKVTYVGGWEEVEAMNECSDMPVEVLRANPQIQTFDMVFAHV 113
K+++LVS+ D Q Q +A+S ++ +DG D EKRN+LF + G YPQFF E ++G +++ G +E++E +NE S +P EVL +P+I+T++ VF V
Sbjct: 6 KLIVLVSNGCHDRTQSSNQEKAQSWFLSRKVPMIIVDGMDANQREKRNELFEISGIRGNYPQFFFEDKEGSISFFGSFEKIEQLNETSGLPAEVLAQHPEIETWEKVFGSV 116
BLAST of EWM27023.1 vs. NCBI_GenBank
Match: gi|1173944442|gb|OQR93177.1| (hypothetical protein THRCLA_22332 [Thraustotheca clavata]) HSP 1 Score: 76.2554 bits (186), Expect = 2.299e-15 Identity = 44/117 (37.61%), Postives = 68/117 (58.12%), Query Frame = 0
Query: 1 MHNKVLLLVSSLTSDAVQEKEQRRARSLLEAKGTVFEEIDGADPLMTEKRNQLFGL-GHTARYPQFFIEREDGKV-TYVGGWEEVEAMNECSDMPVEVLRANPQIQTFDMVFAHVQR 115
M K ++LVS + A + +LL+AK +E+DG+ E+RNQLF + G YPQ F++ ED ++G +E ++ MNE +D+P E+++ N I TFD VFA V+R
Sbjct: 1 MTKKCIVLVSHQSFSAENKSNTSSLNALLDAKKIKRDEVDGSAEHNVERRNQLFNISGVRGTYPQVFLQDEDESTPQFIGFFEAIQDMNEMNDLPAELVQQN-NILTFDAVFADVER 116
BLAST of EWM27023.1 vs. NCBI_GenBank
Match: gi|675205725|ref|XP_008911747.1| (hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|675205727|ref|XP_008911748.1| hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >gi|566014542|gb|ETI37453.1| hypothetical protein, variant 3 [Phytophthora parasitica P1569] >gi|566014543|gb|ETI37454.1| hypothetical protein, variant 4 [Phytophthora parasitica P1569] >gi|567951992|gb|ETK77676.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|567951993|gb|ETK77677.1| hypothetical protein, variant 4 [Phytophthora parasitica] >gi|567980669|gb|ETL31122.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|567980670|gb|ETL31123.1| hypothetical protein, variant 4 [Phytophthora parasitica] >gi|568010185|gb|ETL84375.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568010186|gb|ETL84376.1| hypothetical protein, variant 4 [Phytophthora parasitica] >gi|568040078|gb|ETM37545.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568040079|gb|ETM37546.1| hypothetical protein, variant 4 [Phytophthora parasitica] >gi|568088341|gb|ETN03203.1| hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >gi|568088342|gb|ETN03204.1| hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >gi|570318281|gb|ETO66229.1| hypothetical protein, variant 3 [Phytophthora parasitica P1976] >gi|570318282|gb|ETO66230.1| hypothetical protein, variant 4 [Phytophthora parasitica P1976] >gi|570942057|gb|ETP07314.1| hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >gi|570942058|gb|ETP07315.1| hypothetical protein, variant 4 [Phytophthora parasitica CJ01A1] >gi|570972581|gb|ETP35387.1| hypothetical protein, variant 3 [Phytophthora parasitica P10297] >gi|570972582|gb|ETP35388.1| hypothetical protein, variant 4 [Phytophthora parasitica P10297]) HSP 1 Score: 73.1738 bits (178), Expect = 3.943e-14 Identity = 41/113 (36.28%), Postives = 68/113 (60.18%), Query Frame = 0
Query: 6 LLLVSSLTSDAVQEKEQRRARSLLEAKGTVFEEIDGADPLMTEKRNQLFGL-GHTARYPQFFIEREDGK-VTYVGGWEEVEAMNECSDMPVEVLRANPQIQTFDMVFAHVQRR 116
++L SS+ S A Q+ E + LL+ + E+D + + RN+ F + G A YPQ F++ +GK + Y+G ++E++ +NE +D+P E+L+AN I T + VFA V RR
Sbjct: 8 VVLTSSMVSIAEQKYEIGHLKQLLDGNKITYTEVDCSLEENRDTRNRYFEVSGIRANYPQVFLQDPEGKDIQYIGSFKEIQELNEMNDVPPEILKAN-NIPTLNTVFADVARR 119
BLAST of EWM27023.1 vs. NCBI_GenBank
Match: gi|813168629|ref|XP_012203914.1| (hypothetical protein SPRG_09432 [Saprolegnia parasitica CBS 223.65] >gi|641531413|gb|KDO25489.1| hypothetical protein SPRG_09432 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 72.4034 bits (176), Expect = 6.846e-14 Identity = 42/115 (36.52%), Postives = 68/115 (59.13%), Query Frame = 0
Query: 4 KVLLLVSSLTSDAVQEKEQRRARSLLEAKGTVFEEIDGADPLMTEKRNQLFGL-GHTARYPQFFIEREDGKVT--YVGGWEEVEAMNECSDMPVEVLRANPQIQTFDMVFAHVQR 115
K ++LVS+ + A + +LL+AK +E+DG+ M ++RN LFG+ G YPQ F+ E G+ T ++G ++ + MNE +D+P +++ N I TFD VFA V+R
Sbjct: 3 KCIVLVSNQSFSAENKSNTASLNALLDAKKIKRDEVDGSAEDMVDRRNALFGISGVRGSYPQVFLVDE-GETTPRFIGLFDAIHDMNEMNDLPTDIIEQN-NILTFDAVFADVER 115
BLAST of EWM27023.1 vs. NCBI_GenBank
Match: gi|1173929349|gb|OQR82592.1| (hypothetical protein ACHHYP_15754 [Achlya hypogyna]) HSP 1 Score: 71.2478 bits (173), Expect = 1.624e-13 Identity = 43/115 (37.39%), Postives = 68/115 (59.13%), Query Frame = 0
Query: 4 KVLLLVSSLTSDAVQEKEQRRARSLLEAKGTVFEEIDGADPLMTEKRNQLFGL-GHTARYPQFFIEREDGKVT--YVGGWEEVEAMNECSDMPVEVLRANPQIQTFDMVFAHVQR 115
K ++LVS+ + A + +LL AK EE+DG+ ++RN LFG+ G YPQ F++ E G+ T ++G ++ ++ MNE +D+P E++ N I TFD VFA V+R
Sbjct: 3 KCIVLVSNQSFSAENKSNTASLVALLNAKKIKREEVDGSAEDQVDRRNALFGISGVRGTYPQVFLQDE-GEATPRFIGLFDAIQDMNEMNDLPKEIIEQN-NILTFDTVFADVER 115
BLAST of EWM27023.1 vs. NCBI_GenBank
Match: gi|1032148671|gb|OAO12866.1| (hypothetical protein AV274_5466 [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 69.3218 bits (168), Expect = 1.018e-12 Identity = 38/109 (34.86%), Postives = 56/109 (51.38%), Query Frame = 0
Query: 6 LLLVSSLTSDAVQEKEQRRARSLLEAKGTVFEEIDGADPLMTEKRNQLFGL----GHTARYPQFFIEREDGKVTYVGGWEEVEAMNECSDMPVEVLRANPQIQTFDMVF 110
+LL SSL D + ++ L+ K +FE+IDGA P RN LF L G T YP F+ +ED +TY+G W+ ++ + + L A+P+I TF F
Sbjct: 7 ILLYSSL--DVMHSSNVLVLKAFLKQKNIIFEDIDGALPENKNIRNVLFDLAVKQGGTREYPSAFVMKEDKSITYIGNWDRIQEYLDTESIDKATLAAHPEIVTFSSFF 113 The following BLAST results are available for this feature:
BLAST of EWM27023.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|