|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_102377g1.2.mrna |
| Orig protein id | gnl|cribi|Naga_102377g1.2 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:895692..896583 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3654 ID=rna3654|Name=rna3654|organism=Nannochloropsis gaditana|type=mRNA|length=2333bp
GAGCAAAGCATGGAAGTGTCGGACAAAATACAAGGAGAGAACTGCCTAAC
GGATAGACACTTCCTGTCATTTAACATTTACGCATGGCCTTCCGCCACTT
TTTCAGCCAGGCACCGAACCTCCTCTTCAAACCATGTCCCCACTAGAGGC
CGATGGGGCCACAGCAGGGAGAGGAACTGATTACGATCGACATCACTTGC
TCCAACGAGACGATGAGGAGACTTGTATCGATGGGCTCAACACGTCAAAT
AAGCACCAGAACGAGGAATTTTGGAGAAAGAAAACCAGCCGATGGGACGA
GGGAAGCTCACTGCGCCGCATGCTCAAGGTGTTCATCTTTGTGACCGTGC
TCCTCTTCGTGACAAATCTGGTCTATGAAACGCAAAGCAGTAAGAAATCG
GATGATCTTAGCCTGGCTACAATCCAGCATGGAGAGAGCTCGAGCGCAGA
CGAGGAAAATGAGGTTGCCGCAGCTGCCGAAGATGAGGGTTTGCATCAAG
AAACATCCAGCAACGGGAACAAGGCAGATCTTATTCAGATGAGTGTGGCA
AATGACACCGCCAAGATGTTGACTGCTCGGCAAACCATCGCCTCTGCCCT
TAAGGCGCTTCAAAAAGATGTAGGGCCCGAGTATGCTTCGGAGCTGTTTG
GGTCAGTACGTTTTTGGAACAGAAGCTACATCAAGCAGAAGCTGATTCGC
GCTCTGCTGGGTCAGAACGGCTGTCCGGGCAAGGCCCAGAGTGACCACGA
CTTCATCATGTCTTTCGCAGGGACCTCTGTGACGGCTGGGCATGACAATT
ACTTCAATCAGTCCTATCCGATTGTTCTAGAAAGGCTTTTGCTCGACTCG
TACACTGCTGCAGGATTGAATCTGGAAGTCCGAAATCATGCTATGGGAAA
CAATCCTGCCATTCCCGCGGCATTCTGTGTGAGGAGCCAATTAGGAGAAG
ACACGGATGTGGCGGCTTGGGAGTTCGAGATGATGGTCAGTGGGCCTCTC
AAGAACGCTTACGTGGAGGAGTGGATGCGAAATGCTTTGTACTTGCCGAA
ACGTCCCGCTCTCCTCATGCTTAACGGTGGGGAGGGTGCTCGTGAGCCTG
ATGCGGAGGGCGCACTTCCAGTAGACGCCCGCACCGGGCCTCCACCTCCG
TTCAGCTATGGAGGAGATAAAGGTGATTTGTTCGAGTATTATGATGCTTT
TGGCGTGCATTCGCAAGCAATGCATGAGGCTGTCTGGAAGCTGGATCACC
TTGACAAATACAACTTTCATGCTTTGGTCCAGGCGGGGAAACCGACGCCA
AAACCTGCGAAATGGCATCCAGGTCCGGGTGGACACTTGCTTCGGGCTCA
GATATTGGCACACCACTATCTGAGATTACTGGACGATGCTATTGTCGTGG
TACAAGAGACATTTTCCGAGACTGGCCAAGATAATCCCACAATAGATATC
ATAGATGGTGCTGACAGTGCTGTCAGAAAAGACATGGGTACCTATTCCGC
AGGAATAGAAAATGTGGAAGACGCTACGTTGGGCCTCCCTCCCCCTTTGT
ACTGTGACCACTTTTTCTGTGGCTCTCCGGCTTCATGCGCTATGACTTTC
GAGCCCAAAGAACAAGGGTCACTGCTCGACCTCGTTCTCTCACCTGCGAA
CTTAAGATCGACCAAGCCTACCGTTGAGCCTCAAAAGCCCAAATTGTGGC
ACGTGCAGCTGTATGCCGCCGACTTTGATGCTGTGGTCTTCTCGAAAAAA
CAAGGTTTTCAATACTTGGATATGAAGTACGTGCTTCAAGGTAATCACAA
AGCTGGGCCTTTAAAGTTGGCTGTCAAATCACGAAGCGAAAATCATATCT
TCTTTTGTCAACCGCCAAAGGTATGGGGACACATGCCAGCGCATTGTGGA
GATCTGAAAGATGATGCGGTAGTAAAAATAGATGAAAAGCGCGTCTCAAT
GGTCAAGTCGTCAAGTCTTTACGACAAGGAATCCTCGCAGCCACCCAATT
GCTGGATTTCGGAGTGGAAAGTCAAACCGGGGTCACACGTTATTACCATC
ACTCCCACAAATAGTGATGGAAGCTATGTTGCCTTGTCGGCCTTGATCTG
GTTTTGAAATCTGTAGGAAATTTCAAGCCTTTCGACGGACATATCTCTAT
TTTTTGCGAGCATACTACATGTGTATAAATAACCACGCTCGGATGGAAAG
AAGTGCGGTCTGTATGGGGAAAAAAAGAATACATACAAAACGTGTCATGC
TTTGTGAAGATGTGACCATGCCTCCACGTCCGAATATGTTACTGCTCCCT
TTTTTTATTAAAGGAAAAGGTGCGAAATTTAGA back to topprotein sequence of rna3654 >rna3654-protein ID=rna3654-protein|Name=rna3654|organism=Nannochloropsis gaditana|type=polypeptide|length=185bp
MAISRMEIPADGAKHLPEASSTIASLFQTCASPSIATPPVSFPATLPASS
SSLSPALASSRTCTFFQTAFLPSSPAQDAAKSLVCTLSDQISGPVNELFH
TAHPHTLQYSATADPSSTLLSTPLPLAVPQQVPDTLTSKDQSPGRHQTSF
ALAGHPESMELSTTLTKLFDTARPATVLSSSGAAR back to topmRNA from alignment at CM002461.1:895692..896583+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3654 ID=rna3654|Name=rna3654|organism=Nannochloropsis gaditana|type=mRNA|length=892bp|location=Sequence derived from alignment at CM002461.1:895692..896583+ (Nannochloropsis gaditana)
AGCACGGGCATGGAGCATGAAGCAGAGCGCGTTCAGGCATCGACAGCGGC
CATGCGTCTGCTTGATACGGCACAAGACCCCGCGGCGTCTGTCACCAACA
CGGGCATGGAGCATGAAGCAGAGCGCGTTCAGGCATCGACAGCTGCGAAT
ACGTTTTCACTCTTGAATTCTACTGATGTATCCGTAGCCCACCCCCTTCC
GGTTCAGATGCTGCCagctccccatccccttcatcttcctcttactcttc
tccctcattccaCGGAATTCCACCGTCGCCATCAGCTTTAAATCTCTCGT
CTCAGAATCCTTTCACAACTGCCTGCCTTCCTGATGACATGGCAATATCC
CGGATGGAAATCCCTGCAGACGGAGCTAAGCACCTACCAGAAGCTTCTTC
GACCATTGCTTCGCTCTTCCAGACATGTGCAAGCCCATCTATCGCTACCC
CTCcggtttccttccctgcgaCTCTCcccgcatcctcttcgtcactgtct
cccgccctcgcttcctccaggACCTGCACCTTTTTCCAAACGGCCTTTTT
GCCTTCCAGCCCAGCGCAAGATGCCGCCAAAAGTCTCGTTTGCACACTTA
GCGATCAAATTTCCGGACCGGTCAACGAGCTTTTTCACACCGCTCATCCG
CACACTCTCCAATACAGCGCAACTGCTGACCCCTCTTCAACTCTTCTTTC
CACCCCTCTGCCGCTCGCTGTTCCGCAGCAGGTACCCGACACGCTGACTA
GCAAAGACCAGTCGCCAGGACGACATCAAACGTCATTTGCCTTAGCTGGA
CATCCTGAAAGTATGGAGCTCTCGACAACCCTCACAAAACTCTTCGATAC
GGCACGACCTGCCACGGTATTGTCCTCGTCAGGTGCAGCGCG back to topCoding sequence (CDS) from alignment at CM002461.1:895692..896583+ >rna3654 ID=rna3654|Name=rna3654|organism=Nannochloropsis gaditana|type=CDS|length=554bp|location=Sequence derived from alignment at CM002461.1:895692..896583+ (Nannochloropsis gaditana)
ATGGCAATATCCCGGATGGAAATCCCTGCAGACGGAGCTAAGCACCTACC
AGAAGCTTCTTCGACCATTGCTTCGCTCTTCCAGACATGTGCAAGCCCAT
CTATCGCTACCCCTCcggtttccttccctgcgaCTCTCcccgcatcctct
tcgtcactgtctcccgccctcgcttcctccaggACCTGCACCTTTTTCCA
AACGGCCTTTTTGCCTTCCAGCCCAGCGCAAGATGCCGCCAAAAGTCTCG
TTTGCACACTTAGCGATCAAATTTCCGGACCGGTCAACGAGCTTTTTCAC
ACCGCTCATCCGCACACTCTCCAATACAGCGCAACTGCTGACCCCTCTTC
AACTCTTCTTTCCACCCCTCTGCCGCTCGCTGTTCCGCAGCAGGTACCCG
ACACGCTGACTAGCAAAGACCAGTCGCCAGGACGACATCAAACGTCATTT
GCCTTAGCTGGACATCCTGAAAGTATGGAGCTCTCGACAACCCTCACAAA
ACTCTTCGATACGGCACGACCTGCCACGGTATTGTCCTCGTCAGGTGCAG
CGCG back to top
|