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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100056g16.10449.mrna |
| Orig protein id | gnl|cribi|Naga_100056g16.10449 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:864927..866220 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3640 ID=rna3640|Name=rna3640|organism=Nannochloropsis gaditana|type=mRNA|length=1251bp
ATGTCAAACCTTTCTTCGACTCAAGTTTCTTCCCCCTGGCTTGTGATGAT
GAAGACGGGCTGGAGGCAGCAGCACAAGGGGAAACAGGTTGTTTTAGCCC
TACTTCTTTTCAAAATGGTGATCATGGCAGCAAATTCGGCACGATCATGT
ATGAAAATAGGTTTCGCCTCAACAAGATTACCGTTTTGGCGAGCTGTCTG
CACCAAGGTCCATGGCACTTCTTTTCTCTTCCCCAGTCGATCACGAGTCT
TGCGTTTTTCCAGCACCGAAGATAGCAATCAAGGTAGACCTCCGTATGCT
GCTAGCGACACAGGAGATGAAAGCACTGGATCAGAGAGTAAAATCTCAAT
CATTTCCAAAGCTTCTTCCAAAAAGAAAAAGAAGGGAGGGAAGGAGAAGG
CGGAGATGTTTCGGCTGGATCGTCTGCTCGCAAACCGGGGGGTGGGGACA
AGAACAGAGGTGACGGCCCTGGTGCGCCGAGGCAAGGTGGCCTTAGACAA
CAAGAAAGTGGTCAAAGACCCCTCCTTCCACATCCCTTCCGATGCCGTCC
TTCTCGTCGATCACGTACCTGTACAACCGCTTCCCCTCCTTGTTGTATAT
CACAAGCCTTTTGGCGTTCACTCCACCATGGGAGATCCTATGGGAAGACC
TAATCTGGAAGATGTGCTTCCTCCCCGCCTTGCCAAGACCTTCCACCCTG
TAGGGCGCCTGGACGCCGATACCACGGGCCTGCTTCTTTTCTCAGGAGAC
GGTCAATTAACGCAACGTCTTTTACATCCGTCCAGCAATGTGCAAAGGGA
ATATTTGGCGACGGTAGACATTGATGTTGGGGTGAACGGAAATGAGGAAG
AAAAGAAGAGAAAAGAAGCAGATTTTGAAGCAGCGCTGCGAGCTAAGTTA
GCTGCAGGTGTCAAGACCGCGGATGGAATTTATGAGGCACAACTATTGGA
GGTCATGCGTAGGAAAAAAATAGAAGAGAGAGATGACGAAGTGAATTCCA
TAGAGGAAGATAAGGGGGCAGAGGGGAGGAAATCAAATGCAAGAGAGGAG
CTTGTCCTTCGCGTCGGCGTCAGCGAGGGGAAGCATCGTATGGTTCGACG
TCTTTTGGCCAACGCGGGTTATCCAGTCGTAGCATTGCATCGCGTTAGGT
ACGGGCACATATCTCTGGGAACGTTGTCGGAGGGGGAGGTGACGGAAATA
GAAGCTCAGAGCGAAGGGGGACAGTGGGCCCGGAGATTGCTAGGAAGCTG
A back to topprotein sequence of rna3640 >rna3640-protein ID=rna3640-protein|Name=rna3640|organism=Nannochloropsis gaditana|type=polypeptide|length=346bp
MQPSTPREPHRLSASWIIIDGEGEEVTLDRRNQHNGLSLREEDGGDGTFT
VLTLHPDGGALRSEDERRDGPLLDSSLNLNDGRMIELPTMLEEEGADGMY
PSDGARREASPRRDTPRQGGREQEEEEEEEEQQQQQQQQQEEARVSPRAS
SRAEGPSQPPTDERSENGGDGWRKRATSVVMAHFRAILKSFSHRASYCGT
GAGYSIEDKLRMACPYLRRQSRQRLLLITTTIPVAVIVGVTAAIVLVSVC
VSSTHPSSIPSSFSSSSSSSSSSSFSESEARGNRARAVPGLEASPVLANW
TEKAIIDKEVARVAGCVYGKHVASTEMKSTFHITLTDIGFHYVVER back to topmRNA from alignment at CM002461.1:864927..866220+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3640 ID=rna3640|Name=rna3640|organism=Nannochloropsis gaditana|type=mRNA|length=1294bp|location=Sequence derived from alignment at CM002461.1:864927..866220+ (Nannochloropsis gaditana)
ATGCAGCCCTCAACACCCCGTGAACCTCATCGACTCTCGGCATCTTGGAT
CATTAtagatggagaaggagaggaagtgacTCTTGACCGGGTAATAAGGG
CGGATTTGTGGTGGTGTCACGGTACAGAATTGTTGGCCTCAACTGAAAAC
TTGCACCTCTCTTACATAAACTCAAACACCAGCGCAACCAACACAACGGC
CTAAGTttgcgggaagaggatggaggggacgggACTTTTACGGTGTTAAC
TTTGCATCCTGATGGAGGGGCTTTGAGGAGTGAGGATGAACGAAGAGACG
GTCCTCTGCTGGACTCGTCTCTCAACCTGAATGACGGCAGGATGATCGAG
CTCCCCACAatgttggaagaggaaggtgcaGATGGTATGTATCCAAGCGA
TGGAGCAAGGCGTGAGGCCAGTCCCCGTAGGGACACGCCTagacaaggag
ggcgtgagcaggaggaggaggaggaggaggaggagcagcagcagcagcag
cagcagcagcaagaggaagcgcgTGTCTCACCTAGGGCCTCGTCTAGAGC
AGAAGGTCCATCTCAGCCTCCAACTGATGAAAGGTCTGAAAATGGTGGCG
ATGGCTGGCGGAAGCGCGCCACGTCGGTGGTCATGGCTCATTTCAGGTGC
GTGCTCATATCGTCGCAGTCATTGTCACCATGGATGCAAGCGTGCAAAGG
ATCTTAACTCTCCCAGCGAAGAGTTTTTACAATTTTGTCTATGTATACCC
GCACAGGGCTATCCTCAAAAGCTTCTCGCACCGCGCGTCCTACTGCGGCA
CGGGCGCTGGCTACAGCATTGAAGATAAGCTGCGCATGGCTTGCCCTTAC
TTGCGCCGCCAATCTCGCCAACGCTTGTTGCTGATCACAACTACAATACC
TGTAGCAGTGATAGTGGGTGTGACGGCTGCGATAGTCCTCGTCAGCGTCT
GTGTTTCGAGCAcacacccttcctccattccctcctccttctcctcctcc
tcctcttcctcctcttcctcttccttctccgaaTCCGAAGCTCGCGGAAA
TAGAGCCCGAGCCGTCCCTGGCCTTGAAGCATCTCCTGTTCTTGCCAATT
GTGGAGCGGTCAAACCATCCTTGTTACGTGTGTTGTAGTTTATGCACTCA
GGGACAGAGAAGGCCATCATCGACAAGGAAGTTGCACGTGTAGCAGGATG
TGTATATGGAAAGCACGTCGCTAGCACAGAAATGAAATCTACGTTCCATA
TAACCTTGACTGACATCGGCTTTCATTATGTGGTTGAGAGATGA back to topCoding sequence (CDS) from alignment at CM002461.1:864927..866220+ >rna3640 ID=rna3640|Name=rna3640|organism=Nannochloropsis gaditana|type=CDS|length=4164bp|location=Sequence derived from alignment at CM002461.1:864927..866220+ (Nannochloropsis gaditana)
ATGCAGCCCTCAACACCCCGTGAACCTCATCGACTCTCGGCATCTTGGAT
CATTAtagatggagaaggagaggaagtgacTCTTGACCGGCGCAACCAAC
ACAACGGCCTAAGTttgcgggaagaggatggaggggacgggACTTTTACG
GTGTTAACTTTGCATCCTGATGGAGGGGCTTTGAGGAGTGAGGATGAACG
AAGAGACGGTCCTCTGCTGGACTCGTCTCTCAACCTGAATGACGGCAGGA
TGATCGAGCTCCCCACAatgttggaagaggaaggtgcaGATGGTATGTAT
CCAAGCGATGGAGCAAGGCGTGAGGCCAGTCCCCGTAGGGACACGCCTag
acaaggagggcgtgagcaggaggaggaggaggaggaggaggagcagcagc
agcagcagcagcagcagcaagaggaagcgcgTGTCTCACCTAGGGCCTCG
TCTAGAGCAGAAGGTCCATCTCAGCCTCCAACTGATGAAAGGTCTGAAAA
TGGTGGCGATGGCTGGCGGAAGCGCGCCACGTCGGTGGTCATGGCTCATT
TCAGGGCTATCCTCAAAAGCTTCTCGCACCGCGCGTCCTACTGCGGCACG
GGCGCTGGCTACAGCATTGAAGATAAGCTGCGCATGGCTTGCCCTTACTT
GCGCCGCCAATCTCGCCAACGCTTGTTGCTGATCACAACTACAATACCTG
TAGCAGTGATAGTGGGTGTGACGGCTGCGATAGTCCTCGTCAGCGTCTGT
GTTTCGAGCAcacacccttcctccattccctcctccttctcctcctcctc
ctcttcctcctcttcctcttccttctccgaaTCCGAAGCTCGCGGAAATA
GAGCCCGAGCCGTCCCTGGCCTTGAAGCATCTCCTGTTCTTGCCAATTGG
ACAGAGAAGGCCATCATCGACAAGGAAGTTGCACGTGTAGCAGGATGTGT
ATATGGAAAGCACGTCGCTAGCACAGAAATGAAATCTACGTTCCATATAA
CCTTGACTGACATCGGCTTTCATTATGTGGTTGAGAGATGAATGCAGCCC
TCAACACCCCGTGAACCTCATCGACTCTCGGCATCTTGGATCATTAtaga
tggagaaggagaggaagtgacTCTTGACCGGCGCAACCAACACAACGGCC
TAAGTttgcgggaagaggatggaggggacgggACTTTTACGGTGTTAACT
TTGCATCCTGATGGAGGGGCTTTGAGGAGTGAGGATGAACGAAGAGACGG
TCCTCTGCTGGACTCGTCTCTCAACCTGAATGACGGCAGGATGATCGAGC
TCCCCACAatgttggaagaggaaggtgcaGATGGTATGTATCCAAGCGAT
GGAGCAAGGCGTGAGGCCAGTCCCCGTAGGGACACGCCTagacaaggagg
gcgtgagcaggaggaggaggaggaggaggaggagcagcagcagcagcagc
agcagcagcaagaggaagcgcgTGTCTCACCTAGGGCCTCGTCTAGAGCA
GAAGGTCCATCTCAGCCTCCAACTGATGAAAGGTCTGAAAATGGTGGCGA
TGGCTGGCGGAAGCGCGCCACGTCGGTGGTCATGGCTCATTTCAGGGCTA
TCCTCAAAAGCTTCTCGCACCGCGCGTCCTACTGCGGCACGGGCGCTGGC
TACAGCATTGAAGATAAGCTGCGCATGGCTTGCCCTTACTTGCGCCGCCA
ATCTCGCCAACGCTTGTTGCTGATCACAACTACAATACCTGTAGCAGTGA
TAGTGGGTGTGACGGCTGCGATAGTCCTCGTCAGCGTCTGTGTTTCGAGC
Acacacccttcctccattccctcctccttctcctcctcctcctcttcctc
ctcttcctcttccttctccgaaTCCGAAGCTCGCGGAAATAGAGCCCGAG
CCGTCCCTGGCCTTGAAGCATCTCCTGTTCTTGCCAATTGGACAGAGAAG
GCCATCATCGACAAGGAAGTTGCACGTGTAGCAGGATGTGTATATGGAAA
GCACGTCGCTAGCACAGAAATGAAATCTACGTTCCATATAACCTTGACTG
ACATCGGCTTTCATTATGTGGTTGAGAGATGAATGCAGCCCTCAACACCC
CGTGAACCTCATCGACTCTCGGCATCTTGGATCATTAtagatggagaagg
agaggaagtgacTCTTGACCGGCGCAACCAACACAACGGCCTAAGTttgc
gggaagaggatggaggggacgggACTTTTACGGTGTTAACTTTGCATCCT
GATGGAGGGGCTTTGAGGAGTGAGGATGAACGAAGAGACGGTCCTCTGCT
GGACTCGTCTCTCAACCTGAATGACGGCAGGATGATCGAGCTCCCCACAa
tgttggaagaggaaggtgcaGATGGTATGTATCCAAGCGATGGAGCAAGG
CGTGAGGCCAGTCCCCGTAGGGACACGCCTagacaaggagggcgtgagca
ggaggaggaggaggaggaggaggagcagcagcagcagcagcagcagcagc
aagaggaagcgcgTGTCTCACCTAGGGCCTCGTCTAGAGCAGAAGGTCCA
TCTCAGCCTCCAACTGATGAAAGGTCTGAAAATGGTGGCGATGGCTGGCG
GAAGCGCGCCACGTCGGTGGTCATGGCTCATTTCAGGGCTATCCTCAAAA
GCTTCTCGCACCGCGCGTCCTACTGCGGCACGGGCGCTGGCTACAGCATT
GAAGATAAGCTGCGCATGGCTTGCCCTTACTTGCGCCGCCAATCTCGCCA
ACGCTTGTTGCTGATCACAACTACAATACCTGTAGCAGTGATAGTGGGTG
TGACGGCTGCGATAGTCCTCGTCAGCGTCTGTGTTTCGAGCAcacaccct
tcctccattccctcctccttctcctcctcctcctcttcctcctcttcctc
ttccttctccgaaTCCGAAGCTCGCGGAAATAGAGCCCGAGCCGTCCCTG
GCCTTGAAGCATCTCCTGTTCTTGCCAATTGGACAGAGAAGGCCATCATC
GACAAGGAAGTTGCACGTGTAGCAGGATGTGTATATGGAAAGCACGTCGC
TAGCACAGAAATGAAATCTACGTTCCATATAACCTTGACTGACATCGGCT
TTCATTATGTGGTTGAGAGATGAATGCAGCCCTCAACACCCCGTGAACCT
CATCGACTCTCGGCATCTTGGATCATTAtagatggagaaggagaggaagt
gacTCTTGACCGGCGCAACCAACACAACGGCCTAAGTttgcgggaagagg
atggaggggacgggACTTTTACGGTGTTAACTTTGCATCCTGATGGAGGG
GCTTTGAGGAGTGAGGATGAACGAAGAGACGGTCCTCTGCTGGACTCGTC
TCTCAACCTGAATGACGGCAGGATGATCGAGCTCCCCACAatgttggaag
aggaaggtgcaGATGGTATGTATCCAAGCGATGGAGCAAGGCGTGAGGCC
AGTCCCCGTAGGGACACGCCTagacaaggagggcgtgagcaggaggagga
ggaggaggaggaggagcagcagcagcagcagcagcagcagcaagaggaag
cgcgTGTCTCACCTAGGGCCTCGTCTAGAGCAGAAGGTCCATCTCAGCCT
CCAACTGATGAAAGGTCTGAAAATGGTGGCGATGGCTGGCGGAAGCGCGC
CACGTCGGTGGTCATGGCTCATTTCAGGGCTATCCTCAAAAGCTTCTCGC
ACCGCGCGTCCTACTGCGGCACGGGCGCTGGCTACAGCATTGAAGATAAG
CTGCGCATGGCTTGCCCTTACTTGCGCCGCCAATCTCGCCAACGCTTGTT
GCTGATCACAACTACAATACCTGTAGCAGTGATAGTGGGTGTGACGGCTG
CGATAGTCCTCGTCAGCGTCTGTGTTTCGAGCAcacacccttcctccatt
ccctcctccttctcctcctcctcctcttcctcctcttcctcttccttctc
cgaaTCCGAAGCTCGCGGAAATAGAGCCCGAGCCGTCCCTGGCCTTGAAG
CATCTCCTGTTCTTGCCAATTGGACAGAGAAGGCCATCATCGACAAGGAA
GTTGCACGTGTAGCAGGATGTGTATATGGAAAGCACGTCGCTAGCACAGA
AATGAAATCTACGTTCCATATAACCTTGACTGACATCGGCTTTCATTATG
TGGTTGAGAGATGA back to top
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