rna3631, rna3631 (mRNA) Nannochloropsis gaditana

Overview
Namerna3631
Unique Namerna3631
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1531
Alignment locationCM002461.1:846648..847555 -

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Properties
Property NameValue
Productcell growth defect factor -2
Orig transcript idgnl|cribi|Naga_100056g26.10458.mrna
Orig protein idgnl|cribi|Naga_100056g26.10458
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:846648..847555 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100056g26gene3498Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3631rna3631-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27045.1cds3622Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3631 ID=rna3631|Name=rna3631|organism=Nannochloropsis gaditana|type=mRNA|length=1531bp
GAGTTCATTCCAAGCCAACCAACCACCGCCCTTCCACGTACGTTTCCACA
CGCTTAGAAACTTCCATCCATGCCTCGTTATTTGATGCAATTCCTTCCTT
TTTCACAGAGATGCGAAACACATTCTTACTTTTACTTGGGGGCTTGGTCG
GCGTTTCGTCGTATTTCCTACCCTTCTCTTTCAATCAGTATGCAACAGCT
CGCGCAAATGAGATTGCGACACGTAAGGCACAGCAACAAAGCATCGCCAC
GAAGGCGCACGATTTGTTGGACGATTTGCCCGAGTTGACTGATTCCAGGC
TGGCCGGTTGGCGGCTCAAGAAAGGGGCGCACGGAAGTGGCGAGACAGGC
GTAGAGGGAGACAGCGCGTCTGCCGCAAGCATGGAGGATACACAAGCAAT
CGTGGATCGAGGCACAGAATCTTTTTCCCCGCAACAGTATGACGTCGTTG
AGTACCCTTTGCCCTCTCACGCGCATGGCATCTTGGACGGCGATGACCGT
GTGCGAGGGGTAGGGGTGCTTTTGAGCAATAACAGAGACAGATTAGACGC
CGCAAGCCTCCCAGCAGAGAAGATCGATTTGTGTCAGGTTGAGCCACTGA
CCTTGGACCCAGAGGGGCAATGGGGCAGCGGGCTAGAGGGGGGGGAGCAG
CAGGTATGGCGGAAGGACGAGCTCGAACCGCGCGTGTTCGTCGCCTATGC
GGACTTGAGGAAAATCACATCGAAGCAAAATGGTATGGCGGATAAGTGGC
GGCGTTGGATTTTGGAGGAGCCCTTATCGGAGGGGTGTGGGCCTCCCCCA
GGCGCGGAGGAGGAGCCAGAAATTCTGTAAAGGGAAAAAAGGGGATCAAA
GAGGTTAAGAGCCTGTTATCGGTTGATTTGAAAGGCGGATGGCATCATTT
TTATTGTGTACGATGTCCATGTGCGGGGAGGAGGTGGAGCCTTGCCGGGT
GGGGCTTGTAGATATGTTAGAGCGCAGGGGTGGAAATGGAAAAATGTTAC
GCCTGATCACGATTTTGGGCCCATCGAGTGCTCTTTATTGACGAATGCAA
AATTGAGGAGGCAGAAAGCTGTTGCGGATGAGAGGGCCTGGCGTGAACAC
GGGTGAATGCCCTTTGCACACAAATTATTTCTTCGTGATCGGCTAGGCGA
CTATGGAATAAAAATGCGGTAGCACTTTCATGTTGCGAAGTCAGTGCACC
AGTGAAATAAGACAACGCCAAGCCAAGACGCCACGAATGCATGTAATGCC
TGAACCACATGTCGGAACTACTAGGTGCCATGTCTCTCCGAAAGCGATAT
GTTAATGTTGTTGAGGATACTGCGATACAGACCACATGAAAGCAGAGGCG
GATAAGACGGTGTACAAGATAAAAATGACAAAAGAAGGAGCACTGGATAG
GCAAGGAATGTCTTGTCGGCGAGTAACATGTCCAGTGCTGATGTTTAGAT
GCAAAGGATGCATGTGCGAGCATCATGGGGTCTAAGGAGCCCGAAGAAAG
CAAAACGGGGCATAAATTTGGTAGCGGCATG
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protein sequence of rna3631

>rna3631-protein ID=rna3631-protein|Name=rna3631|organism=Nannochloropsis gaditana|type=polypeptide|length=165bp
MADAYCRHAASLIAGALGAMASVFGKWGLDPEAMKQLLHKTRIEPVLSSP
PMLLLARSACVGMMLLCNIAMTSFFVRSLHQSGSLLATVINTSINFVATG
LAGHIFFKEALSLLWWSGAVVTLAGVVLLGSCSPTGATRKKGAEKMEESY
VQEMKPRYQLRKRTR
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mRNA from alignment at CM002461.1:846648..847555-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3631 ID=rna3631|Name=rna3631|organism=Nannochloropsis gaditana|type=mRNA|length=908bp|location=Sequence derived from alignment at CM002461.1:846648..847555- (Nannochloropsis gaditana)
CAGAATTAACACATCGTTGGACCCTTGCATAACAAGCCTTGACTACCTCC
ACAGTTCCTGCAGGCCATGGCGGATGCTTATTGCAGGCATGCAGCCAGGT
AAAGTAGGCCTCCTTGCACGTCATTTGTCGGTCCCGCGGTTTGTTTAATG
CGCTTTGTACTCCAAGGCCATGTCATCGACTTCACTTCTCATGTTTTATG
TTGCCCAATTTCGCCCCGCAACTCCGTCTTTTGACTCATCTCTCCCTTAC
TTCAGTTTGATTGCTGGAGCATTAGGGGCAATGGCGTCCGTATTCGGCAA
GTGGGGTTTAGACCCAGAGGCTATGAAACAGTTACTGCATAAAACAAGGA
TAGAGCCTGTCTTGTCATCCCCACCTATGCTCCTCCTTGCACGAAGCGCC
TGTGTAGGAATGATGCTTCTTTGCAACATCGCTATGACCTCGTTTTTTGT
ACGAAGTTTACACCAGTCGGGTTCTTTACTTGCTACAGTAATCAATACTT
CTATCAACTTTGTGGCGACAGGCCTTGCGGGGCATATATTCTTTAAAGAA
GCGTTGTCTCTGTTGTGGTGGAGTGGCGCAGTCGTCACACTTGCTGGTGT
AGTGTTGCTTGGTAGCTGCAGCCCGACAGGGGCAACAAGGAAAAAAGGCG
CGGAAAAGATGGAAGAAAGTTACGTTCAGGAAATGAAACCAAGGTATCAA
TTGCGTAAACGAACACGCTAAGTTCCCTTTTGCAAGGGTGATGATGAGAC
CCTTTTAGTTACACGAAAAAAAGTGCTTCCGCAGATGAATGATTGGGAAA
GGGAAAGGTATGTGGGGAAGCCGCAGGGTTCTGTAGACTATATCATAGTA
TGGTGAAATTTTCTGCATCGACAAAGCAATACAAAACCTGTACGAGTGCC
GCAATGAA
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Coding sequence (CDS) from alignment at CM002461.1:846648..847555-

>rna3631 ID=rna3631|Name=rna3631|organism=Nannochloropsis gaditana|type=CDS|length=996bp|location=Sequence derived from alignment at CM002461.1:846648..847555- (Nannochloropsis gaditana)
TTTGATTGCTGGAGCATTAGGGGCAATGGCGTCCGTATTCGGCAAGTGGG
GTTTAGACCCAGAGGCTATGAAACAGTTACTGCATAAAACAAGGATAGAG
CCTGTCTTGTCATCCCCACCTATGCTCCTCCTTGCACGAAGCGCCTGTGT
AGGAATGATGCTTCTTTGCAACATCGCTATGACCTCGTTTTTTGTACGAA
GTTTACACCAGTCGGGTTCTTTACTTGCTACAGTAATCAATACTTCTATC
AACTTTGTGGCGACAGGCCTTGCGGGGCATATATTCTTTAAAGAAGCGTT
GTCTCTGTTGTGGTGGAGTGGCGCAGTCGTCACACTTGCTGGTGTAGTGT
TGCTTGGTAGCTGCAGCCCGACAGGGGCAACAAGGAAAAAAGGCGCGGAA
AAGATGGAAGAAAGTTACGTTCAGGAAATGAAACCAAGGTATCAATTGCG
TAAACGAACACGCTAAATGGCGGATGCTTATTGCAGGCATGCAGCCAGTT
TGATTGCTGGAGCATTAGGGGCAATGGCGTCCGTATTCGGCAAGTGGGGT
TTAGACCCAGAGGCTATGAAACAGTTACTGCATAAAACAAGGATAGAGCC
TGTCTTGTCATCCCCACCTATGCTCCTCCTTGCACGAAGCGCCTGTGTAG
GAATGATGCTTCTTTGCAACATCGCTATGACCTCGTTTTTTGTACGAAGT
TTACACCAGTCGGGTTCTTTACTTGCTACAGTAATCAATACTTCTATCAA
CTTTGTGGCGACAGGCCTTGCGGGGCATATATTCTTTAAAGAAGCGTTGT
CTCTGTTGTGGTGGAGTGGCGCAGTCGTCACACTTGCTGGTGTAGTGTTG
CTTGGTAGCTGCAGCCCGACAGGGGCAACAAGGAAAAAAGGCGCGGAAAA
GATGGAAGAAAGTTACGTTCAGGAAATGAAACCAAGGTATCAATTGCGTA
AACGAACACGCTAAATGGCGGATGCTTATTGCAGGCATGCAGCCAG
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Synonyms
Publications