EWM27045.1, cds3622 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27045.1 vs. NCBI_GenBank
Match: gi|585109219|gb|EWM27045.1| (cell growth defect factor -2 [Nannochloropsis gaditana]) HSP 1 Score: 338.576 bits (867), Expect = 1.086e-117 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
Query: 1 MADAYCRHAASLIAGALGAMASVFGKWGLDPEAMKQLLHKTRIEPVLSSPPMLLLARSACVGMMLLCNIAMTSFFVRSLHQSGSLLATVINTSINFVATGLAGHIFFKEALSLLWWSGAVVTLAGVVLLGSCSPTGATRKKGAEKMEESYVQEMKPRYQLRKRTR 165
MADAYCRHAASLIAGALGAMASVFGKWGLDPEAMKQLLHKTRIEPVLSSPPMLLLARSACVGMMLLCNIAMTSFFVRSLHQSGSLLATVINTSINFVATGLAGHIFFKEALSLLWWSGAVVTLAGVVLLGSCSPTGATRKKGAEKMEESYVQEMKPRYQLRKRTR
Sbjct: 1 MADAYCRHAASLIAGALGAMASVFGKWGLDPEAMKQLLHKTRIEPVLSSPPMLLLARSACVGMMLLCNIAMTSFFVRSLHQSGSLLATVINTSINFVATGLAGHIFFKEALSLLWWSGAVVTLAGVVLLGSCSPTGATRKKGAEKMEESYVQEMKPRYQLRKRTR 165
BLAST of EWM27045.1 vs. NCBI_GenBank
Match: gi|1032641537|gb|OAQ22927.1| (hypothetical protein K457DRAFT_119071 [Mortierella elongata AG-77]) HSP 1 Score: 84.3445 bits (207), Expect = 2.153e-17 Identity = 47/146 (32.19%), Postives = 78/146 (53.42%), Query Frame = 0
Query: 11 SLIAGALGAMASVFGKWGLDPEAMKQLLHKTRIEPVLSSP--------------PMLLLARSACVGMMLLCNIAMTSFFVRSLHQS-GSLLATVINTSINFVATGLAGHIFFKEALSLLWWSGAVVTLAGVVLLGSCSPTGATRKK 141
+++AG A+ASVF K LD ++ L + ++P P+++ RS C ++ +CN AM + F ++L++S S TVIN++ NF T + G++ F E L+L WW GA + + G VL+ S A++KK
Sbjct: 33 AILAGTFAALASVFAKLTLDARTVEFLQYACNAVLAPTTPYCTSFFIAKEGETSPVVVAVRSTCFALIFICNAAMWTLFTKALNRSKSSATVTVINSAANFCITAVLGYVLFSEPLALQWWFGASLIVVGSVLVSSDEANAASKKK 178
BLAST of EWM27045.1 vs. NCBI_GenBank
Match: gi|470391124|ref|XP_004334639.1| (hypothetical protein ACA1_091360 [Acanthamoeba castellanii str. Neff] >gi|440791388|gb|ELR12626.1| hypothetical protein ACA1_091360 [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 78.9518 bits (193), Expect = 2.098e-15 Identity = 47/144 (32.64%), Postives = 75/144 (52.08%), Query Frame = 0
Query: 4 AYCRHAASLIAGALGAMASVFGKWGLDPEAMKQLL---HKTRIEPVLSSPPMLLLARSACVGMMLLCNIAMTSFF-VRSLHQSGSLLATVINTSINFVATGLAGHIFFKEALSLLWWSGAVVTLAGVVLLGSCSPTGATRKKGA 143
A+ S +AG +ASVFGK +D + + + H T + R+AC GM+ +CN+ M +FF V+S++ S S+ ATV+N++ NF ++ L GH+ F E L WW G+ +AG+ L + +T A
Sbjct: 11 AWWGFVLSTLAGTCAGLASVFGKLAMDGVWILRFVEFCHSTTTMTTVVDEYAGAALRAACFGMVFVCNMIMWNFFFVKSMNLSSSVTATVVNSATNFFSSALLGHLLFSEPLPAAWWLGSAFIIAGLFFLARGDTSTSTTDDVA 154
BLAST of EWM27045.1 vs. NCBI_GenBank
Match: gi|298714862|emb|CBJ25761.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 78.9518 bits (193), Expect = 2.807e-15 Identity = 52/138 (37.68%), Postives = 73/138 (52.90%), Query Frame = 0
Query: 7 RHAASLIAGALGAMASVFGKWGLDPEAMKQLLHKTRIEPVLSSPPMLL------LARSACVGMMLLCNIAMTSFFVRSLHQSGSLLATVINTSINFVATGLAGHIFFKEALSLLWWSGAVVTLAGVVLL-GSCSPTGA 137
H S+ +GAL ASV GK D + Q+ + E P + L L + A + M + N M S F+++L SGS +ATV N S NFV +G++G + F E L LW+ GA + ++GVVLL G SP G
Sbjct: 15 NHGYSVASGALACFASVLGKVAFDGDTPFQVQATSACEEHF--PELALCNTVGRLVQGASLAGMFMVNAVMLSTFLKALQMSGSTVATVTNFSTNFVLSGISGRMVFGERLPALWFFGASLVVSGVVLLTGGSSPEGG 150
BLAST of EWM27045.1 vs. NCBI_GenBank
Match: gi|924881369|gb|KOS37675.1| (hypothetical protein ACN38_g11527 [Penicillium nordicum]) HSP 1 Score: 75.485 bits (184), Expect = 2.154e-14 Identity = 47/124 (37.90%), Postives = 71/124 (57.26%), Query Frame = 0
Query: 11 SLIAGALGAMASVFGKWGLDPEAM---KQLLHKTRIEPVLSSPPMLLLARSACVGMMLLCNIAMTSFFVRSLHQSGSLL-ATVINTSINFVATGLAGHIFFKEALSLLWWSGAVVTLAGVVLLG 130
++ +GA A+ VF K D + L H +E SSP + +L R AC+G+ +LCNI M + F R+L S + ++ NT+ NF+AT + G I F+EA+ LWW GA + AG +L+G
Sbjct: 21 AITSGAFAALNGVFAKLTTDDHTTAFAQSLAHVFGLE---SSPVIEMLTRGACLGLNVLCNIIMWALFTRALTAGPSTVKVSITNTASNFLATAVFGMIVFQEAVGGLWWLGAAMMGAGCILVG 141
BLAST of EWM27045.1 vs. NCBI_GenBank
Match: gi|1168093449|gb|OQD93975.1| (hypothetical protein PENSOL_c029G00308 [Penicillium solitum]) HSP 1 Score: 75.485 bits (184), Expect = 2.371e-14 Identity = 47/124 (37.90%), Postives = 71/124 (57.26%), Query Frame = 0
Query: 11 SLIAGALGAMASVFGKWGLDPEAM---KQLLHKTRIEPVLSSPPMLLLARSACVGMMLLCNIAMTSFFVRSLHQSGSLL-ATVINTSINFVATGLAGHIFFKEALSLLWWSGAVVTLAGVVLLG 130
++ +GA A+ VF K D + L H +E SSP + +L R AC+G+ +LCNI M + F R+L S + ++ NT+ NF+AT + G I F+EA+ LWW GA + AG +L+G
Sbjct: 21 AITSGAFAALNGVFAKLTTDDHTTAFAQSLAHLFGLE---SSPVIEMLTRGACLGLNVLCNIIMWALFTRALTAGPSTVKVSITNTASNFLATAVFGMIVFQEAVGGLWWLGAAMMGAGCILVG 141
BLAST of EWM27045.1 vs. NCBI_GenBank
Match: gi|584417335|emb|CDM29045.1| (Drug/metabolite transporter [Penicillium roqueforti FM164]) HSP 1 Score: 75.0998 bits (183), Expect = 3.518e-14 Identity = 47/124 (37.90%), Postives = 71/124 (57.26%), Query Frame = 0
Query: 11 SLIAGALGAMASVFGKWGLDPEAM---KQLLHKTRIEPVLSSPPMLLLARSACVGMMLLCNIAMTSFFVRSLHQSGSLL-ATVINTSINFVATGLAGHIFFKEALSLLWWSGAVVTLAGVVLLG 130
++ +GA A+ VF K D + L H +E SSP + +L R AC+G+ +LCNI M + F R+L S + ++ NT+ NF+AT L G + F+EA+ LWW GA + AG +L+G
Sbjct: 21 AITSGAFAALNGVFAKLTTDDHTTAFAQSLAHLFGLE---SSPVIEMLTRGACLGLNVLCNIIMWALFTRALTAGPSTVKVSITNTASNFLATALLGMVVFQEAVGGLWWLGAGMMGAGCILVG 141
BLAST of EWM27045.1 vs. NCBI_GenBank
Match: gi|672818126|gb|KFH63028.1| (hypothetical protein MVEG_11065 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 75.485 bits (184), Expect = 4.056e-14 Identity = 46/132 (34.85%), Postives = 68/132 (51.52%), Query Frame = 0
Query: 13 IAGALGAMASVFGKWGLDPEAMKQLLH--KTRIEPVL------------SSPPMLLLARSACVGMMLLCNIAMTSFFVRSLHQS-GSLLATVINTSINFVATGLAGHIFFKEALSLLWWSGAVVTLAGVVLL 129
+AG A+ASVF K +D + L T + P + P+ RSAC G++ +CN AM + F ++L++S S TVIN+S NF T + G+ F E L+L WW GA + + G VL+
Sbjct: 32 LAGTFAALASVFAKLTMDARTVNFLRDTCNTLVAPTTPICTSMFIAKDGETSPVEFAVRSACFGLIFICNAAMWTLFTKALNRSQSSATVTVINSSANFCITAVLGYALFSEPLALQWWFGASLIVLGGVLV 163
BLAST of EWM27045.1 vs. NCBI_GenBank
Match: gi|1168182659|gb|OQE80182.1| (hypothetical protein PENNAL_c0047G03789 [Penicillium nalgiovense]) HSP 1 Score: 74.7146 bits (182), Expect = 4.691e-14 Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = 0
Query: 11 SLIAGALGAMASVFGKWGLDPEAM---KQLLHKTRIEPVLSSPPMLLLARSACVGMMLLCNIAMTSFFVRSLHQSGSLL-ATVINTSINFVATGLAGHIFFKEALSLLWWSGAVVTLAGVVLLG 130
++ +GA A+ VF K D + L H ++ SSP + +L R AC+G+ +LCN+ M + F R+L S + ++ NT+ NF+AT L G I F+EA+ LWW GA + AG +L+G
Sbjct: 21 AITSGAFAALNGVFAKLTTDNHTTAFAQSLAHLFGLD---SSPVIEMLTRGACLGLNVLCNVIMWALFTRALTAGPSTVKVSITNTASNFLATALLGMIVFQEAVGGLWWLGAAMMGAGCILVG 141
BLAST of EWM27045.1 vs. NCBI_GenBank
Match: gi|255954613|ref|XP_002568059.1| (Pc21g10240 [Penicillium rubens Wisconsin 54-1255] >gi|211589770|emb|CAP95921.1| Pc21g10240 [Penicillium rubens Wisconsin 54-1255] >gi|1021541417|gb|KZN88721.1| hypothetical protein EN45_073010 [Penicillium chrysogenum]) HSP 1 Score: 74.7146 bits (182), Expect = 4.691e-14 Identity = 44/121 (36.36%), Postives = 68/121 (56.20%), Query Frame = 0
Query: 11 SLIAGALGAMASVFGKWGLDPEAMKQLLHKTRIEPVLSSPPMLLLARSACVGMMLLCNIAMTSFFVRSLHQSGSLL-ATVINTSINFVATGLAGHIFFKEALSLLWWSGAVVTLAGVVLLG 130
++ +GA A+ VF K D + + SSP + +L R AC+G+ +LCN+ M + F R+L S + ++ NT+ NF+AT L G I F+EA+ LWW GA + AG +L+G
Sbjct: 21 AITSGAFAALNGVFAKLTTDNHTTAFAQSLAHLFGLDSSPVIEMLTRGACLGLNVLCNVIMWALFTRALTAGPSTVKVSITNTASNFLATALFGMIVFQEAVGGLWWLGAAMMGAGCILVG 141 The following BLAST results are available for this feature:
BLAST of EWM27045.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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