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Properties
| Property Name | Value |
|---|
| Product | wd repeat-containing protein 82 |
| Orig transcript id | gnl|cribi|Naga_100056g40.10460.mrna |
| Orig protein id | gnl|cribi|Naga_100056g40.10460 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:821359..822639 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3618 ID=rna3618|Name=rna3618|organism=Nannochloropsis gaditana|type=mRNA|length=1490bp
CTTCCGCCGGGTTTCAAGACTTACACAGCACTGTGGCAGGAGCGAGAACA
CAGCAATATACACAAAGAAATTTCGAAGCAACCGCGGATAATCCCTCAAT
GGAGAAATTTACCAAGTGGGCCGACAAGGGCACGGGAATAAACCCATTTT
TGCCCCAACGTCGCGCTGCCTCCTCCTTACCGTCCAAGGTGGCATCCGGC
CTCCTAGCCATTGTCCTCATCGCCGTGCGGCTGCCTTTGATCCTGCTCAC
TCTGACGTGGTTTTTGGCCTTGTCCTTGCTTACCAAGCCGTGGTTCGATA
TTTTGACAGGCGCGCTTTTCACGACATACGCATACCTAGATGAAGGGCCC
TCGAAACCCATGACCCTAAGCCCCCAGCACACCGGCTTCTTTTTGCTCGT
CCTCGGCTCTCTCACCGCCCTGTCTGTGCCCATCCGTCGTGTTTTCTCCT
TCCTGACCCTGCGCCCTCCGGTGTACCTCCTCCTCAGCATCCTCGGCGTC
TCGTATCGGGAACAGCACGCGAACCTCCGGAAACTCGGTCTGCGGCCTCC
AGGGCACAGGCCCCACGACTCCCGCATCGGCCGCACCATCCAAGCCGGAG
ATATCCTACTGAGCAACCACACGTCCCCTCTGGAGGTGCTCTTTTTCATC
AGCCGCTTCCTACCTGCCTTCTCCGCCTTGGCCGTCGCCCCGGTGGCCCA
GGGCCGCCTTTTGACGCCGCTTCAGGCATGGTGGAGGGCCGGGCTCGTCC
CTCCCAAAGCCTTTGAGACAGGGACCGGCCAGGCTCTGTCGAGTCTCGCC
GCGGAGGCCAAGCGCCAAGGACAAGCCGTTGTGGTCTTCCCCGAGACGGC
TCGATCCAACGGGGACGGCGTCCTCGTCTTTCAAAGAGGGGTGCTGGATG
GCACCGACGCCAAGGAGGCGAAGGGAGGGAAACTAACAGGAGGAGAGAGG
GGTGGGGGCGTAAATGTGCATATCTTCGGCTTCAGTGCGCCTAAAGGGGA
AGTTATGCCCACACATACAGTGGGTAGCGTCTTTGGTTTTTATCTGCAGC
TCTTGAGCCGTTGGCGGACGACCGTGAATGTCTCGTACGTCGGGGCCCCC
GACTTGCTCCTGCAACCCACTTCAGCCAAAGGGAGTGGTGGCAGCAGCCG
GACACCTGTGTACAGCAGTGAAGAGTTGCGTAGTCTTCTTGCCAACATGC
TGGGTCGACCCAAACTTAATCTTGGCTACGAGGATTTCTGCAGCTTCAGA
AAGTATTACGCGGCGATTCGCGCGGGTGATGAGGAGAGGGCAGCGGCCTT
GGCGCGTGCGCGTGAGAAAATGTAGGCATCGTAAAAATCGTACACAAAGA
ATTTGGAGCCGTGTAAAGCGCACCGTGAAAGTACAAAGAGCTTGAACGTA
CTTGAAAGATCAAAAATCGATGCTGGGAGGTGCTTTGAAGTTTGCCAAAC
GTCTCGCCACTCGGGCTTTGAGTTGGAGGCCGCCTATCGC back to topprotein sequence of rna3618 >rna3618-protein ID=rna3618-protein|Name=rna3618|organism=Nannochloropsis gaditana|type=polypeptide|length=399bp
MPSWKLCVPDDSTAHNVIIYTTSRSLLLPSFMSGARSGGALEAVRVRELE
RGCVVAGAAPVSCLDYHREGEYLVATSDDDSVRLINALEGKERKKVFCKK
YGVELARFTHHPQGIICSSRQSTNQAAAPTGSSAHDIRYLSLYDNQYLRF
FSGHEARVTGLAMSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIGGDGG
SNHNAQPVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGIS
EAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTL
VIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVFDAG
EERTMDGIVHRLEGHPRPVQQVRCNPVYEQVASGCSHVVLWISATGKGK back to topmRNA from alignment at CM002461.1:821359..822639+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3618 ID=rna3618|Name=rna3618|organism=Nannochloropsis gaditana|type=mRNA|length=1281bp|location=Sequence derived from alignment at CM002461.1:821359..822639+ (Nannochloropsis gaditana)
ATGAGATTTTCATGCCATCATGGAAACTATGTGTACCTGACGATTCCACC
GCACACAATGTCATCATCTACACCACATCCAGATCCTTGCTGTTGCCTTC
TTTCATGAGCGGGGCCCGGAGTGGCGGTGCACTGGAAGCAGTGCGTGTGC
GGGAACTGGAACGAGGCTGCGTTGTAGCGGGCGCAGCGCCTGTGAGCTGC
CTAGATTACCATCGAGAGGGGGAGTATTTGGTAGCAACATCGGACGACGA
TAGTGTGCGATTAATCAATGCCCTGGAGGGTAAGGAACGGAAAAAAGTTT
TTTGTAAAAAGTACGGCGTGGAGCTGGCCCGCTTCACACACCATCCCCAG
GGCATAATATGCAGCAGCCGGCAATCCACTAACCAAGCGGCGGCCCCCAC
GGGGTCCTCGGCACATGACATCCGATATTTGTCGCTGTACGACAACCAGT
ACCTCCGGTTTTTCTCCGGGCATGAAGCGCGCGTGACGGGACTCGCCATG
TCGTATACAGATGACCGCTTTTTGAGCGCGTCAATGGACGGTACTGTGCG
CATTTGGACCTTGCAGCAGCCCAAATGCTTGGGTTTGGGCAGTATTGGTG
GCGATGGTGGCAGCAATCACAATGCTCAGCCCGTCTTGGCGGAGTTCGAT
CCCTCTGGCTTGGTGTTCGCGGCGTGTGCCCAGGTCCACGACAGGCATTT
ACTTAAACTGTACGACGCTCGAAAGTTCAGCGAGGGAGCTTTCGAGAGTT
TCGGAATCTCTGAAGCTGAGCTTCGGGAGACgcttcagcagcagcaaccg
ACCATCGATCCGGAGGTAGCTCGAAAACTGGTTCAAGCCCCATGGACGGA
TATGCATTTCAGCGCCGATGGGAAAAACCTGTTGGTCTCGACGCGCGCGG
GGATGACGCTGGTGATTGACACCTACGATCTGCAAATTACGCGGTTTCTA
ACAGGGTACCGGAATACCGGAGGATTAGACATCACGGCCTGCTACACGCC
GGACGCCGGCCACATATTGACGGGTTCTGAGGATGGGAATGTCTGTGTGT
TCGACGCcggcgaggagaggacgatggaTGGGATCGTGCACCGCTTGGAG
GGGCATCCTCGACCAGTCCAGCAGGTTAGGTGCAATCCTGTCTACGAGCA
AGTGGCGAGCGGGTGCAGCCACGTGGTTCTGTGGATATCGGCaacaggga
aaggaaaatgaggagaaaggctCGGCACTGTAAATGATCTCGCGGCATAT
TATATTAATAAAGAAAGTATACTGTCAAATC back to topCoding sequence (CDS) from alignment at CM002461.1:821359..822639+ >rna3618 ID=rna3618|Name=rna3618|organism=Nannochloropsis gaditana|type=CDS|length=1200bp|location=Sequence derived from alignment at CM002461.1:821359..822639+ (Nannochloropsis gaditana)
ATGCCATCATGGAAACTATGTGTACCTGACGATTCCACCGCACACAATGT
CATCATCTACACCACATCCAGATCCTTGCTGTTGCCTTCTTTCATGAGCG
GGGCCCGGAGTGGCGGTGCACTGGAAGCAGTGCGTGTGCGGGAACTGGAA
CGAGGCTGCGTTGTAGCGGGCGCAGCGCCTGTGAGCTGCCTAGATTACCA
TCGAGAGGGGGAGTATTTGGTAGCAACATCGGACGACGATAGTGTGCGAT
TAATCAATGCCCTGGAGGGTAAGGAACGGAAAAAAGTTTTTTGTAAAAAG
TACGGCGTGGAGCTGGCCCGCTTCACACACCATCCCCAGGGCATAATATG
CAGCAGCCGGCAATCCACTAACCAAGCGGCGGCCCCCACGGGGTCCTCGG
CACATGACATCCGATATTTGTCGCTGTACGACAACCAGTACCTCCGGTTT
TTCTCCGGGCATGAAGCGCGCGTGACGGGACTCGCCATGTCGTATACAGA
TGACCGCTTTTTGAGCGCGTCAATGGACGGTACTGTGCGCATTTGGACCT
TGCAGCAGCCCAAATGCTTGGGTTTGGGCAGTATTGGTGGCGATGGTGGC
AGCAATCACAATGCTCAGCCCGTCTTGGCGGAGTTCGATCCCTCTGGCTT
GGTGTTCGCGGCGTGTGCCCAGGTCCACGACAGGCATTTACTTAAACTGT
ACGACGCTCGAAAGTTCAGCGAGGGAGCTTTCGAGAGTTTCGGAATCTCT
GAAGCTGAGCTTCGGGAGACgcttcagcagcagcaaccgACCATCGATCC
GGAGGTAGCTCGAAAACTGGTTCAAGCCCCATGGACGGATATGCATTTCA
GCGCCGATGGGAAAAACCTGTTGGTCTCGACGCGCGCGGGGATGACGCTG
GTGATTGACACCTACGATCTGCAAATTACGCGGTTTCTAACAGGGTACCG
GAATACCGGAGGATTAGACATCACGGCCTGCTACACGCCGGACGCCGGCC
ACATATTGACGGGTTCTGAGGATGGGAATGTCTGTGTGTTCGACGCcggc
gaggagaggacgatggaTGGGATCGTGCACCGCTTGGAGGGGCATCCTCG
ACCAGTCCAGCAGGTTAGGTGCAATCCTGTCTACGAGCAAGTGGCGAGCG
GGTGCAGCCACGTGGTTCTGTGGATATCGGCaacagggaaaggaaaatga back to top
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