EWM27047.1, cds3609 (CDS) Nannochloropsis gaditana

Overview
NameEWM27047.1
Unique Namecds3609
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:821370..822569 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27047.1
Productwd repeat-containing protein 82
Orig transcript idgnl|cribi|Naga_100056g40.10460.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:821370..822569 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
Homology
BLAST of EWM27047.1 vs. NCBI_GenBank
Match: gi|585109221|gb|EWM27047.1| (wd repeat-containing protein 82 [Nannochloropsis gaditana])

HSP 1 Score: 831.632 bits (2147), Expect = 0.000e+0
Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0
Query:    1 MPSWKLCVPDDSTAHNVIIYTTSRSLLLPSFMSGARSGGALEAVRVRELERGCVVAGAAPVSCLDYHREGEYLVATSDDDSVRLINALEGKERKKVFCKKYGVELARFTHHPQGIICSSRQSTNQAAAPTGSSAHDIRYLSLYDNQYLRFFSGHEARVTGLAMSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIGGDGGSNHNAQPVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGISEAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTLVIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVFDAGEERTMDGIVHRLEGHPRPVQQVRCNPVYEQVASGCSHVVLWISATGKGK 399
            MPSWKLCVPDDSTAHNVIIYTTSRSLLLPSFMSGARSGGALEAVRVRELERGCVVAGAAPVSCLDYHREGEYLVATSDDDSVRLINALEGKERKKVFCKKYGVELARFTHHPQGIICSSRQSTNQAAAPTGSSAHDIRYLSLYDNQYLRFFSGHEARVTGLAMSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIGGDGGSNHNAQPVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGISEAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTLVIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVFDAGEERTMDGIVHRLEGHPRPVQQVRCNPVYEQVASGCSHVVLWISATGKGK
Sbjct:    1 MPSWKLCVPDDSTAHNVIIYTTSRSLLLPSFMSGARSGGALEAVRVRELERGCVVAGAAPVSCLDYHREGEYLVATSDDDSVRLINALEGKERKKVFCKKYGVELARFTHHPQGIICSSRQSTNQAAAPTGSSAHDIRYLSLYDNQYLRFFSGHEARVTGLAMSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIGGDGGSNHNAQPVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGISEAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTLVIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVFDAGEERTMDGIVHRLEGHPRPVQQVRCNPVYEQVASGCSHVVLWISATGKGK 399          
BLAST of EWM27047.1 vs. NCBI_GenBank
Match: gi|298709003|emb|CBJ30954.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 253.832 bits (647), Expect = 8.569e-78
Identity = 132/350 (37.71%), Postives = 209/350 (59.71%), Query Frame = 0
Query:   46 VRELERGCVVAGAAPVSCLDYHREGEYLVATSDDDSVRLINALEGKERKKVFCKKYGVELARFTHHPQGIICSSRQSTNQAAAPTGSSAHDIRYLSLYDNQYLRFFSGHEARVTGLAMSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIGGDGGSNHNAQPVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGISEAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTLVIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVFDAGEERTMDGIVHR-LEGHPRPVQQVRCNPVYEQVASGCSHVVLWISA 394
            V  +  G V  G + V+ +D+H +GE  VA + D SV LINA+EG++RK +  +KYG  + R+THH Q ++ SS             + H +RYLSLYDN++LRFF+GH  +V  +AMS TDD F++ S D TVR+W L +P+CL +       G+     P +A +D  GLVFAA       +++KLYDAR + +G F++F +   ++ E + + +  +  + AR L  A W  M FSADG+++L++T A + L +  ++  + +  TG++N    ++ AC+TP+A ++L+GSED  +  +     R  DG + + L+GH   V +V C+P YE +AS C++  LWI A
Sbjct:   28 VPAMAMGQVFPGESVVTSMDFHEDGELCVAANSDKSVTLINAVEGRKRKTIHTQKYGCGVVRYTHHDQTVLVSSDAD---------GADHAVRYLSLYDNRFLRFFTGHTDKVVSIAMSPTDDHFMTGSADKTVRLWHLSRPQCLAVLEFPPGHGT-----PYVA-YDQQGLVFAAATSTGKANIIKLYDARNYEKGPFDTFTVEHKKVEEFIVKSKE-MRSKKARALSLARWKSMKFSADGQSILIATDASLVLTLHAFEGDVKQVFTGHQNDLHSELDACFTPNAEYVLSGSEDSGIYAW-----RAEDGKLAKILKGHSSAVGRVLCSPKYEVIASACTNTALWIDA 356          
BLAST of EWM27047.1 vs. NCBI_GenBank
Match: gi|1143405704|ref|XP_019957141.1| (PREDICTED: WD repeat-containing protein 82-like isoform X2 [Paralichthys olivaceus])

HSP 1 Score: 224.172 bits (570), Expect = 7.377e-67
Identity = 132/361 (36.57%), Postives = 193/361 (53.46%), Query Frame = 0
Query:   37 SGGALEAVRVRELERGCVVAGAAPVSCLDYHREGEYLVATSDDDSVRLINALEGKERKKVFCKKYGVELARFTH-HPQGIICSSRQSTNQAAAPTGSSAHDIRYLSLYDNQYLRFFSGHEARVTGLAMSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIGGDGGSNHNAQPVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGISEAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTLVIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVFDAGEERTMDGIVHRLEG-HPRPVQQVRCNPVYEQVASGCSHVVLWISAT 395
            S G L + RV    R      +  V+C+D+   G++ +++SDDD + L +  EGK ++ +F KKYGV+L R+TH   Q ++ SS +  +            IRYLSL DN+Y+R+F GH ARV  L+MS  D+ F+S S+D T+RIW L+ P C GL        +N   +PV + FDP GL+FAA  +      +KLYD R F +G F SF   E     T                    WT + FS DGK +L+ST  GM  V++ +   +    +GY N+ G+ + AC+TPD+  ++ GSEDG V V+    E  M   V  L+G HP P+  ++ NP Y   AS C+++  W+  T
Sbjct:    4 SDGVLRSFRVARTYR----ENSQKVNCVDFSPSGQHAISSSDDDCIVLYDIQEGKPKRTLFSKKYGVDLIRYTHGDTQTVVYSSNKLDDT-----------IRYLSLSDNKYIRYFPGHTARVIALSMSPVDETFISGSLDKTIRIWDLRSPNCQGL--------TNPLGKPVCS-FDPDGLIFAAGVE---SQAIKLYDLRAFDKGPFASF---ETRFNRTCD------------------WTGLKFSNDGKQILISTNGGMIRVLNAFSGSVLHNFSGYNNSRGISLEACFTPDSQFVMIGSEDGRVHVWST--ESGMK--VAVLDGKHPGPINTLQFNPRYMTFASACTNMNFWLPCT 312          
BLAST of EWM27047.1 vs. NCBI_GenBank
Match: gi|831758278|ref|XP_012749293.1| (hypothetical protein SAMD00019534_108100, partial [Acytostelium subglobosum LB1] >gi|735850122|dbj|GAM27634.1| hypothetical protein SAMD00019534_108100, partial [Acytostelium subglobosum LB1])

HSP 1 Score: 222.631 bits (566), Expect = 2.651e-66
Identity = 123/336 (36.61%), Postives = 183/336 (54.46%), Query Frame = 0
Query:   59 APVSCLDYHREGEYLVATSDDDSVRLINALEGKERKKVFCKKYGVELARFTHHPQGIICSSRQSTNQAAAPTGSSAHDIRYLSLYDNQYLRFFSGHEARVTGLAMSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIGGDGGSNHNAQPVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGISEAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTLVIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVFD--AGEERTMDGIVHRLEGHPRPVQQVRCNPVYEQVASGCSHVVLWI 392
            AP++ +D++++G  LV  SDD+S+ L N   G  +K ++ KKYGV+L RFTHH   I+C+S+ S +++          +RYLSL+DN+YLR+F GH  +V  LAMS  +D F+S S+D TVR+W L+   C G+           NA+P+++ +DP GL+ A    V   + +KL+DAR +  G F +F         T++   P              WT M FS DGK +L++T      +ID ++ Q+ +  T + N G   + A +TPD  ++L GSEDG V V+    GEE  + G      GH   V  V+ NP     ASGCS +  WI
Sbjct:   23 APINSMDFYKDGSLLVTASDDESIHLYNINSGDTQKVIYSKKYGVDLIRFTHHNNAILCASKNSWDES----------LRYLSLHDNKYLRYFKGHRNKVVSLAMSPKEDTFISGSLDETVRLWDLRTSTCQGI--------MRRNARPIVS-YDPEGLILATAISV---NTIKLFDARNYDRGPFTTF---------TIKHTNP------------VEWTSMKFSNDGKFILLTTTEATIFLIDAFNGQVIQTYTSFVNDGNSVLEASFTPDTQYVLGGSEDGTVHVWRTLTGEEVAVWG------GHNSKVGCVQWNPKMMMAASGCSTLSFWI 309          
BLAST of EWM27047.1 vs. NCBI_GenBank
Match: gi|1079735480|ref|XP_018536926.1| (PREDICTED: WD repeat-containing protein 82-like isoform X1 [Lates calcarifer])

HSP 1 Score: 222.246 bits (565), Expect = 3.287e-66
Identity = 130/355 (36.62%), Postives = 189/355 (53.24%), Query Frame = 0
Query:   40 ALEAVRVRELERGCVVAGAAPVSCLDYHREGEYLVATSDDDSVRLINALEGKERKKVFCKKYGVELARFTH-HPQGIICSSRQSTNQAAAPTGSSAHDIRYLSLYDNQYLRFFSGHEARVTGLAMSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIGGDGGSNHNAQPVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGISEAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTLVIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVFDAGEERTMDGIVHRLEG-HPRPVQQVRCNPVYEQVASGCSHVVLWI 392
             L + RV    R      +  V+C+DY   GE  +++SDDD + L +  EGK ++ ++ KKYGV+L R+TH   Q ++ SS +  +            IRYLSL DN+Y+R+F GH ARV  L+MS  DD F+S S+D T+RIW L+ P C GL        +N   +PV + FDP GL+FAA  +      +KLYD R F +G F SF   E                          WT + FS DGK +L+ST  GM  V++ ++  +    +GY N+ G+ + AC+TPD+  ++ GSEDG V V+    E  M   V  L+G HP P+  ++ NP Y   AS C+++  W+
Sbjct:    7 VLRSFRVARTYR----ENSQKVNCVDYSPNGENAISSSDDDCIVLYDIREGKPKRTLYSKKYGVDLIRYTHGDTQTVVYSSNKVDDT-----------IRYLSLVDNKYIRYFPGHTARVIALSMSPVDDTFISGSLDKTIRIWDLRSPNCQGL--------TNPLGKPVCS-FDPDGLIFAAGVE---SQAIKLYDLRAFDKGPFASF---ETRFNRVCD------------------WTGLKFSNDGKQILISTNGGMIRVLNAFNGSVLHTFSGYNNSRGISLEACFTPDSQFVMIGSEDGRVHVWST--ESGMK--VAVLDGKHPGPINTLQFNPRYMTFASACTNMTFWL 309          
BLAST of EWM27047.1 vs. NCBI_GenBank
Match: gi|1169059186|ref|XP_020442357.1| (WD repeat-containing protein 82-like isoform X1 [Monopterus albus])

HSP 1 Score: 219.935 bits (559), Expect = 2.657e-65
Identity = 133/357 (37.25%), Postives = 193/357 (54.06%), Query Frame = 0
Query:   40 ALEAVRVRELERGCVVAGAAPVSCLDYHREGEYLVATSDDDSVRLINALEGKERKKVFCKKYGVELARFTH-HPQGIICSSRQSTNQAAAPTGSSAHDIRYLSLYDNQYLRFFSGHEARVTGLAMSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIGGDGGSNHNAQPVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGISEAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTLVIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVF--DAGEERTMDGIVHRLEG-HPRPVQQVRCNPVYEQVASGCSHVVLWI 392
             L + RV    R      +  V+C+DY   GE  +++SDDD + L +  EGK ++ +F KKYGV+L R+TH   Q ++ SS +  +            IRYLSL DN+Y+R+F GH ARV  L+MS  DD F+S+S+D T+RIW L+ P C GL        +N   +PV + FDP GL+FAA     D   +KLYD R F +G F +F        ET   +    D           WT + FS DGK +L+ST  GM  V++ +   +    +GY N+ G+ + AC+TPD+  I+ GSEDG V V+  D+G +      V  L+G H  P+  ++ NP Y   AS C+++  W+
Sbjct:    7 VLRSFRVARTYR----ENSQKVNCVDYSPNGENAISSSDDDCIVLYDIQEGKPKRTLFSKKYGVDLIRYTHGDTQTVVYSSNKLDDT-----------IRYLSLTDNKYIRYFPGHTARVISLSMSPVDDMFVSSSLDRTIRIWDLRSPNCQGL--------TNPLGKPVCS-FDPDGLIFAAGV---DSQAIKLYDRRAFDKGPFTTF--------ETKFNRHRVCD-----------WTGLKFSNDGKMILISTNGGMVCVLNAFTGCLVHTFSGYNNSRGIPLEACFTPDSQFIMIGSEDGRVHVWSTDSGMK------VAVLDGKHSGPINTLQFNPRYMTFASACTNMTFWL 311          
BLAST of EWM27047.1 vs. NCBI_GenBank
Match: gi|632946271|ref|XP_007888475.1| (PREDICTED: WD repeat-containing protein 82 [Callorhinchus milii])

HSP 1 Score: 219.164 bits (557), Expect = 5.007e-65
Identity = 126/357 (35.29%), Postives = 191/357 (53.50%), Query Frame = 0
Query:   37 SGGALEAVRVRELERGCVVAGAAPVSCLDYHREGEYLVATSDDDSVRLINALEGKERKKVFCKKYGVELARFTHHPQGIICSSRQSTNQAAAPTGSSAHDIRYLSLYDNQYLRFFSGHEARVTGLAMSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIGGDGGSNHNAQPVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGISEAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTLVIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVFDAGEERTMDGIVHRLEG-HPRPVQQVRCNPVYEQVASGCSHVVLWI 392
            +   L + RV ++ R         ++C D+   GE L+++SDDDS+ L +  EGK ++ ++ KKYGV+L R+TH    ++ SS +  +            IRYLSL+DN+Y+R+F GH  RV  L MS  DD F+S+S+D T+R+W L+ P C GL  + G        +P  + FDP GL+FAA     +  ++KLYD R F +G F +F +          Q + T +           WT + FS DGK +LVST  GM  +ID +   + +   GY N  G+ + A +TPD+  ++ GSEDG V V++A         V  L+G H  PV  ++ NP +   AS CS++  W+
Sbjct:    4 TDNVLRSFRVAKVFR----ENTDKINCFDFSPNGETLISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDT-----------IRYLSLHDNKYIRYFHGHSKRVVALCMSPVDDTFMSSSLDKTIRLWDLRSPNCQGLMHLQG--------RPTCS-FDPEGLIFAAGV---NSEIIKLYDLRSFDKGPFATFKM----------QYERTCE-----------WTGLKFSNDGKLMLVSTNGGMVRLIDAFKGAVLQTFAGYNNNKGISLEASFTPDSQFVIIGSEDGKVHVWNAESGLK----VAVLDGKHTGPVSCLQFNPKFMTFASACSNMAFWL 308          
BLAST of EWM27047.1 vs. NCBI_GenBank
Match: gi|1160114029|ref|XP_020366429.1| (WD repeat-containing protein 82 [Rhincodon typus])

HSP 1 Score: 218.394 bits (555), Expect = 8.943e-65
Identity = 126/355 (35.49%), Postives = 190/355 (53.52%), Query Frame = 0
Query:   39 GALEAVRVRELERGCVVAGAAPVSCLDYHREGEYLVATSDDDSVRLINALEGKERKKVFCKKYGVELARFTHHPQGIICSSRQSTNQAAAPTGSSAHDIRYLSLYDNQYLRFFSGHEARVTGLAMSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIGGDGGSNHNAQPVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGISEAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTLVIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVFDAGEERTMDGIVHRLEG-HPRPVQQVRCNPVYEQVASGCSHVVLWI 392
              L + RV ++ R         ++C D+   GE L+++SDDDS+ L +  EGK ++ ++ KKYGV+L R+TH    ++ SS +  +            IRYLSL+DN+Y+R+F GH  RV  L MS  DD F+S+S+D T+R+W L+ P C GL  + G        +P  + FDP GL+FAA     +  ++KLYD R F +G F +F +          Q + T +           WT + FS DGK +LVST  GM  +ID +   + +   GY N  G+ + A +TPD+  ++ GSEDG V V++A         V  L+G H  PV  ++ NP +   AS CS++  W+
Sbjct:    6 NVLRSFRVAKVFR----ENTDKINCFDFSPNGETLISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDT-----------IRYLSLHDNKYIRYFHGHSKRVVALCMSPVDDTFMSSSLDKTIRLWDLRSPNCQGLMHLQG--------RPTCS-FDPEGLIFAAGV---NSEIIKLYDLRSFDKGPFATFKM----------QYERTCE-----------WTGLKFSNDGKLMLVSTNGGMVRLIDAFKGAVLQTFGGYNNNKGISLEASFTPDSQFVMIGSEDGKVHVWNAESGLK----VAVLDGKHTGPVSCLQFNPKFMTFASACSNMAFWL 308          
BLAST of EWM27047.1 vs. NCBI_GenBank
Match: gi|1168885035|ref|XP_020484645.1| (WD repeat-containing protein 82 [Labrus bergylta])

HSP 1 Score: 218.009 bits (554), Expect = 1.740e-64
Identity = 124/355 (34.93%), Postives = 191/355 (53.80%), Query Frame = 0
Query:   39 GALEAVRVRELERGCVVAGAAPVSCLDYHREGEYLVATSDDDSVRLINALEGKERKKVFCKKYGVELARFTHHPQGIICSSRQSTNQAAAPTGSSAHDIRYLSLYDNQYLRFFSGHEARVTGLAMSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIGGDGGSNHNAQPVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGISEAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTLVIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVFDAGEERTMDGIVHRLEG-HPRPVQQVRCNPVYEQVASGCSHVVLWI 392
              L + RV ++ R      +  ++C D+   GE ++++SDDDS+ L +  EGK ++ ++ KKYGV+L R+TH    ++ SS +  +            IRYLSL+DN+Y+R+F GH  RVT L+MS  DD F+S S+D T+R+W L+ P C GL  + G        +PV + FDP GL+FAA     +  ++KLYD R F +G F +F +      E                     WT + FS DGK +LVST  G   ++D +   +     GY N+ G+ + A +TPD+  ++ GSEDG + V++A  E  M   V  L+G H  P+  ++ NP +   AS CS++  W+
Sbjct:    6 NVLRSFRVAKVFR----ENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDT-----------IRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQG--------KPVCS-FDPEGLIFAAGI---NSEMVKLYDLRSFDKGPFATFKLQYDRTCE---------------------WTGLKFSNDGKLILVSTNGGALRILDAFKGAVLHSFVGYNNSKGVTLEASFTPDSQFVMIGSEDGKIHVWNA--ESGMK--VALLDGKHTGPITCLQFNPKFMTFASACSNMAFWL 308          
BLAST of EWM27047.1 vs. NCBI_GenBank
Match: gi|1083334340|ref|XP_018617737.1| (PREDICTED: WD repeat-containing protein 82 [Scleropages formosus] >gi|938082901|gb|KPP78043.1| WD repeat-containing protein 82-like [Scleropages formosus])

HSP 1 Score: 217.624 bits (553), Expect = 1.778e-64
Identity = 128/355 (36.06%), Postives = 191/355 (53.80%), Query Frame = 0
Query:   39 GALEAVRVRELERGCVVAGAAPVSCLDYHREGEYLVATSDDDSVRLINALEGKERKKVFCKKYGVELARFTHHPQGIICSSRQSTNQAAAPTGSSAHDIRYLSLYDNQYLRFFSGHEARVTGLAMSYTDDRFLSASMDGTVRIWTLQQPKCLGLGSIGGDGGSNHNAQPVLAEFDPSGLVFAACAQVHDRHLLKLYDARKFSEGAFESFGISEAELRETLQQQQPTIDPEVARKLVQAPWTDMHFSADGKNLLVSTRAGMTLVIDTYDLQITRFLTGYRNTGGLDITACYTPDAGHILTGSEDGNVCVFDAGEERTMDGIVHRLEG-HPRPVQQVRCNPVYEQVASGCSHVVLWI 392
              L + RV ++ R      +  ++C D+   GE ++++SDDDS+ L +  EGK ++ ++ KKYGV+L R+TH    ++ SS +  +            IRYLSL+DN+Y+R+F GH  RV  L+MS  DD F+S SMD T+R+W L+ P C GL  + G        +PV + FDP GL+FAA     +  ++KLYD R F +G F +F +               ID           WT + FS DGK +LVST  G   V+D +   +     GY N+ G+ + A +TPD+  I+ GSEDG + V++A  E  M   V  L+G H  PV  ++ NP +   AS CS++  W+
Sbjct:    6 NVLRSFRVAKVFR----ENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHAANTVVYSSNKIDDT-----------IRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSMDKTIRLWDLRSPNCQGLMHLQG--------KPVCS-FDPEGLIFAAGV---NSEMVKLYDLRSFDKGPFATFKLP--------------IDR-------NCEWTGLKFSNDGKLILVSTNGGTLRVLDAFKGAVLHCFGGYNNSKGVTLEASFTPDSQFIMIGSEDGKIHVWNA--ESGMK--VAVLDGKHTGPVTCLQFNPKFMTFASACSNMAFWL 308          
The following BLAST results are available for this feature:
BLAST of EWM27047.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109221|gb|EWM27047.1|0.000e+0100.00wd repeat-containing protein 82 [Nannochloropsis g... [more]
gi|298709003|emb|CBJ30954.1|8.569e-7837.71conserved unknown protein [Ectocarpus siliculosus][more]
gi|1143405704|ref|XP_019957141.1|7.377e-6736.57PREDICTED: WD repeat-containing protein 82-like is... [more]
gi|831758278|ref|XP_012749293.1|2.651e-6636.61hypothetical protein SAMD00019534_108100, partial ... [more]
gi|1079735480|ref|XP_018536926.1|3.287e-6636.62PREDICTED: WD repeat-containing protein 82-like is... [more]
gi|1169059186|ref|XP_020442357.1|2.657e-6537.25WD repeat-containing protein 82-like isoform X1 [M... [more]
gi|632946271|ref|XP_007888475.1|5.007e-6535.29PREDICTED: WD repeat-containing protein 82 [Callor... [more]
gi|1160114029|ref|XP_020366429.1|8.943e-6535.49WD repeat-containing protein 82 [Rhincodon typus][more]
gi|1168885035|ref|XP_020484645.1|1.740e-6434.93WD repeat-containing protein 82 [Labrus bergylta][more]
gi|1083334340|ref|XP_018617737.1|1.778e-6436.06PREDICTED: WD repeat-containing protein 82 [Sclero... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3618rna3618Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications