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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100056g43.10442.mrna |
| Orig protein id | gnl|cribi|Naga_100056g43.10442 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:816138..817592 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3615 ID=rna3615|Name=rna3615|organism=Nannochloropsis gaditana|type=mRNA|length=4093bp
CCCACGCCCGTGCACTTCCACTTCTCCACGCCGGGGAGACCCGCCTTCGA
CCCGCGCCCGACGCCCCCCCTGCGGCGGGAGGAGAGGGGTCGCCTAGGGA
AGGACGGGGGGGCGGACGACGCGGGCGGCACGGCGCCCTCGCAAGCGGGC
CATGCCGAGGCAGTCAACACGGAGGGGGCGGGCCTCTCGGGACCAGGGAT
GGACGTCGGCGGGCTGGGCTTCACCCTGGGAGGCAGTCGGGGAGGCCGTG
GTGGGGGTGCCGGTCGAGGCGGGGCCCCGCGTCGTCGGGATGTGGGGAAG
AAGCTTCGGATCAACAGCACCCCTTCCGGTCCCAAGCCTTTGGCCTCCGA
GCTTCCGCCCCCCCCTGCTACCTTCCCTGCCTCCGTTCCCTCCTCCTTCC
CGGCTTCTGAGGCCTCAGGGCGCATGCCGATGGACCTCTCGGACGCCCTC
CAGCGGGAAGTCGACGCAAGAACAGGAGTGGCGGCGGCCGACCCCCCCCC
CCCCGTATTTCCCACGCCTCCACAGAGTTCCACCGGCGACGGCCAAAACT
CTGCGCCCGAGACCGTCGCCTTCTCCCTGGGGGCGGCCTCCGCGGGTCTC
TCCCCCTCGAAGCCCCCCCCCCGGGCCCGCTTTGTCCACCATCGGTCGCG
GTCCAGGGGCCACGCCCGGGGCGGGAGCAGCACCAGCACCGGCAGCAGTG
ACGGGGATCAGGGGGGTCGGAGCACCTCGGCCCATTCGAGTGCATCGACC
CACTGCTTCCCTCCTTCCCTCTCCCCCCTCGCCACGACCTCGGCACCCTT
CTCTACGGACGCGGCAGCGGCTACCCCTGACGTCACCGTGGGCGTCAATC
ACCATGTGGGCGGAGCCCCCGCCCCCCAACTCTCTTCTCCCTTGCAGGGC
AAGGAAGGATTCGACCTGTGGTCCTCCTGTAAGGGTTCTCCCTCTGTGCC
GGTGCCGCCTTTCGGGCATGGGTGGCCAGGGAGGCCCCGGGAGGGGCGCG
GGACAGAGGGTCGGCAGGACGGGGCGGGGAGCCAGGCTGAGGACAAGGAT
GAGCTCTCAGGACACCAGAAAGTAGGATCAGACGTAGGGGTGGAGCAGGA
GACAGATTGCTCTTCCTCATCGGCCTCGGCCTTTGCCTTGGGTGGCCACG
GGGCCAATACCAAAGCCAGCGCCAGGCATGTCCCGGTCCCGAGCATGTCT
CACGATGGAGCGCCTGGCTCGCCAAACTTTATATTTGGGAGCGAGCCTAC
TGGGGCTGCTTTCCATATCGGGGAAGACGCTTCGTATGCAGGCTCGGCGG
GGAAATCTGTGGACGAAGGTAGGCCAGGTGAGGAAGCGGGCAAGGCCCCT
CGCTCGTCGGCTTTCATGCCGGCCGCCGGAGGGAAGGAAGAGATCTTCTT
CTCACTCGGCAGCAGCAAGACCGTCACGCCCACGAAAGGGGGGGGCTCCA
GTCGAACAGGGAGCCGGCATCTGCTCCATTCGCACGCCCGCTCCGCTTCG
GCGGGCTTCATAGCCAAGCAGAGGGAGGAATCGCCCGGCTCGCCACTTTT
CGGGCAGACGGGGTCGACCTCGCATTGGACCGCAGCCGGTTCCGGCGCAC
AGGGCCCTTCTGGCGGGCCCACGGGAGAAGGAAAGTCGCCTGGCATCGCC
TCTCCCTCGTCCGCTGCTACCGCAGGGAAGCTTCCTCCCCCCTACGACAC
GCAACGCGAACTGCAGCACGCGGCCCAGACCTTCCGCGAGAAGGCTTCGT
CCCTTTACCTGACCAAACATTACGAAGAGTCCCTCCACGAGTTCTCCAAC
GCCCTCCTTCTCGCCCCGGACGGGTGGTTAGAAAAACCCAAGCTTTTCTG
CAATCGAGCCGCCGCCTTGATCATGATTCACCGGTACGAGGACGCCGTCA
AGGATTGCGAGAAAGCCATCAAGGGCGACCGGCACCTTCTCAAAGCATAC
ACTCGCTGCGGGCGGGCCTACCTTCATATGGGGGTACTGGAACGCGCCTA
CGCGTGTTTCGACGAGGTGCGACGACGAGCCAAGGAGCGTCTGCTCGACA
AGTTTGGGCCGGACGTCCCTCCTATCCCCCCGTCCTCGGGCGCCAGCACT
CATGTCCTCAATCAACAGCGGGTGGCTGCCCACGAAAAGAAATCTTTGGA
GGAGGCGGTCCGGGAAGCTGAGGATGGACAGGCGGAGGTGCAGGCGGTGG
AAGGCGCTTTACAAGCTGCCGAACAGCACTTCAAGCGTGTGGAGTGGCCC
GAGGCCCTGGACAGGGTGGAAGCCGCGCTTCGTTTTGCCCACCGGGCCAA
GCGAGCCATGCGACTGAAGCTCGTGGCTTTATGCAAATTGAAGCGATGGG
AGGAGGGCGTCCGCTTCAGTGAGAAGTATTACGCATCCAACAAGGCTGAA
CTTTTGAGTCCTGTCTTCATCCCACCTACCTCCACAGCCGATGGGGGGGG
CACCTCTCCGTCTTCGCCTGGCGATGCCAACCCGCACGCCCCTGTGAACG
TCATCCTCCGCATGGACTCCCTCGAACAACGGAGCTACATCCGTTGCCTG
CGGTACACTGACAGAGAGGACGACGCCCTGGCCGCCTTGAAGTCGTTGCT
CAGCCATCACGGCCACGTGATGTGGGTGTCCAAGGAACTGGTGCGCATCC
AGGCCATCCGGCGGGCGAAGGAGGCGGGAGACGCCGCATTCCGCGAACAG
AAGTTCGAGGCCGCCTTGGCGCACTACGGGGAAGCCTTGAAATTGGACCC
GGAATGGGACACGATGAACGCCGTGCTGCACTGTAACCGTGGCGCCGCCC
ACATGGCCCTGCGCTTGTTCGAGAAGGCGAAAGAGGACTGCACGCATGCC
CTCCGGAAAAAACCTGACTATTGGAAGGCTTTCCTCCGAAGGGCCAGGGC
CTGGAGGGAAATGAAGCGGTGGGGGGAGAGTATATTCGACTACGAGACGT
ACCTGAAGCACGCCTATCCTGCAGGGGGAGGCCGGGAAGATGGGAGAGAG
GCAGGAAATGTGGGGGCCAGCGTCAAGGGATCGGTGGCGGACGTGCAAAG
CGAACTGGAAAGTGTGCGGATTGAAATGCAAGTGGAGAAGGAGCGGCGCG
ACTTTGCCAAAAGACAGCAGCAGCAACATGATTCCCATTGGCGGGGGGGC
GGCCGACCTTGGCGCCATGGAAAAGGGCGGAAGCCGGGGTATCGAGTCTC
GAGCCCGTTCGAGGAGTCGAGTAGCGAAGAGGAGGAGGAGGAGGAGGACG
TCACGGGGGCGGAAGACGAAGAGGACGCTGATAGGGCGGGGGTCTTTCGC
GATTTTTTCGAATACTACCGCCGGCACCAGAAGGAGGCCGAGCCTGCTAG
AGCTAGCGGCCCCCACAACGGTCCAGCAGGCTCCTTTGGACGGTCAGCTT
CTTCCTCTTCTTACTCGAGCAACCGCCGCGCCTACAACTTCTCAAACACG
AAAAGAAACGCAGGGAGCAATGCGAATGGCAGCGGTGCTCCAGGCCCGAA
ATCATCCAGACCTTTGCCGGGGTGGGGTCGCAGCCGTTCCACCTCCTCCG
TTCCTCACTCTGGCTCGAACGTTTCCACGCACTATTCCGTCTTGGGTATC
GGACGCGTGGCGAGTTCGGGGGAGGTGAAGAAAGCCTACCACCGCCTGGC
CCTCCGCTTTCATCCCGACAAGAACAAAGAGGCGGGGGCGGAGGAGATGT
TCAAGAAAGTCTCGGAAGCCTACAACGTCTTGTCCGATAACAGCGCGAGA
AGGGTTTATGACGCGGAGTTGCGGGTTGGCGGTGGTGGGATATGAGGGAA
GATGGGCCTAGAGAGGCCATTGACGATTCTCTGGTCACGGCAGGGAAATG
TAAGAGGCGGACAGAGATAGAAGAAGGACTGCAATGGATTAAGGGTGGTA
GGGCGTGGAGGGGATAAAATGGTCACCAAAAGTGTTGAAATAGGCGCTGG
AAGGTATTTCGAACGAAAGTCGGCGAGTTGGAGTGTTTTCCGACACAGTA
GAGATAGTCACTGAAATGAAACGTCTTAACCAAAAGAACACTTTGTACAA
GAACTTCATAAACGGTACCCGACTCCTGCATCGTCACATTTCT back to topprotein sequence of rna3615 >rna3615-protein ID=rna3615-protein|Name=rna3615|organism=Nannochloropsis gaditana|type=polypeptide|length=357bp
MAPTSTNKIEGSRAPFASTRVEGERISRLHEINGHHDHREREGTPTPALA
GTPSSSLYLTPPSSGPARDYTPMSIANTAPPKPARRSSVGPGVPPFTPLH
GSPPLEPSSDEAASPDTFASPPWRQAQAPPSSETGAAARKAEDVDDGSYV
DEILEGVSGLGLGSLGPLQGDWLPQIAAILEQVHLKSKERDPEAPDIGGV
AEYLRRLDIRKRRASLSPSPMGDSQDQTRGREGGREGGREGGREGGGMAQ
VHQLSPPSPVSRHAGGKPPRDQTVAASLTPRPDSGSVFTSPGPDGRERAE
GGKAAAGAGTEGDKEGQGVGAEEHASHVARAPLPMPACATSSGPAANPDL
SFRCLGP back to topmRNA from alignment at CM002461.1:816138..817592- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3615 ID=rna3615|Name=rna3615|organism=Nannochloropsis gaditana|type=mRNA|length=1455bp|location=Sequence derived from alignment at CM002461.1:816138..817592- (Nannochloropsis gaditana)
AGACAAAGCGAGAGCCCGGTCGCTCTTCCTTTTGAGGAACTATTTCATAA
TTTCTGAGGTCGTCCGTGCCACGTCCGCCGTGACGGGGTGTCTCGTCGCA
CAGGCATATGTGTTGGCGCATTAGCCTGTTGGAGGGTCTTCCACGCTGGC
GTTCCATGCTTGTGGCACGATGTATACTTCCAAGTCTGGAAGTCTGAAAT
GGCGAACCCTCACTTCATATTCCATGTTCATTCTTCCCGCGCCCACACGC
CTCCTACCTTGCAAGCAGGACTTTTGTCACGAAAACGTCATACTATTGAT
GATTCGTCGTAGCTTCTTACAGCCATCTTAAGTCCCGTAAAGGGTTGGCC
ACGGGGCCGGGCACAGGAGACAGGGCGCTCGTGATGGCCCCGACAAGCAC
GAATAAAATAGAAGGCAGTAGGGCGCCTTTCGCAAGTACACGAGTGGAGG
GGGAGAGGATCAGTAGGCTGCATGAAATAAATGGCCACCACGATCACCGG
GAGAGAGAGGGGACGCCGACTCCGGCTTTGGCAGGCACACCATCCTCATC
GCTTTACTTGACGCCTCCTTCCTCGGGCCCCGCGCGCGATTATACCCCCA
TGTCCATAGCCAACACGGCCCCACCCAAGCCGGCGCGGCGGTCCTCGGTC
GGGCCTGGCGTTCCTCCGTTTACACCACTGCATGGATCCCCGCCACTGGA
GCCATCGTCCGACGAAGCCGCATCTCCAGACACCTTCGCATCCCCCCCGT
GGCGGCAGGCTCAAGCACCCCCATCGTCCGAGACCGGGGCAGCAGCGCGC
AAAGCGGAGGACGTGGACGACGGCTCGTACGTGGACGAGATCTTGGAGGG
CGTGAGTGGGCTGGGGCTGGGCAGTCTGGGCCCCCTGCAAGGGGACTGGC
TGCCGCAAATCGCCGCCATCCTGGAGCAGGTGCACCTCAAGAGCAAGGAG
CGAGACCCAGAGGCTCCCGACATTGGTGGCGTGGCGGAATACCTGCGGCG
TCTGGACATTCGGAAACGACGGGCGTCCCTGTCCCCCTCCCCCATGGGAG
ACAGCCAGGACCAGACCCGAGGGAGGGAGGGGGGGAGGGAGGGAGGGAGG
GAGGGCGGGAGGGAGGGAGGGGGAATGGCCCAGGTGCATCAGCTTTCCCC
GCCCTCCCCCGTGTCGCGCCATGCTGGGGGCAAGCCGCCGCGCGACCAGA
CTGTCGCGGCCTCCCTGACCCCTCGCCCAGACTCCGGGTCGGTTTTTACA
AGCCCGGGGCCCGACGGGAGGGAGAGGGCGGAGGGGGGGAAAGCAGCAGC
AGGGGCGGGGACGGAGGGTGACAAGGAGGGACAGGGGGTTGGGGCAGAGG
AGCATGCGTCGCACGTGGCGAGGGCGCCCCTGCCCATGCCGGCCTGCGCC
ACGTCCTCAGGCCCCGCCGCCAATCCGGACCTCAGCTTCCGTTGCCTCGG
GCCAT back to topCoding sequence (CDS) from alignment at CM002461.1:816138..817592- >rna3615 ID=rna3615|Name=rna3615|organism=Nannochloropsis gaditana|type=CDS|length=1072bp|location=Sequence derived from alignment at CM002461.1:816138..817592- (Nannochloropsis gaditana)
ATGGCCCCGACAAGCACGAATAAAATAGAAGGCAGTAGGGCGCCTTTCGC
AAGTACACGAGTGGAGGGGGAGAGGATCAGTAGGCTGCATGAAATAAATG
GCCACCACGATCACCGGGAGAGAGAGGGGACGCCGACTCCGGCTTTGGCA
GGCACACCATCCTCATCGCTTTACTTGACGCCTCCTTCCTCGGGCCCCGC
GCGCGATTATACCCCCATGTCCATAGCCAACACGGCCCCACCCAAGCCGG
CGCGGCGGTCCTCGGTCGGGCCTGGCGTTCCTCCGTTTACACCACTGCAT
GGATCCCCGCCACTGGAGCCATCGTCCGACGAAGCCGCATCTCCAGACAC
CTTCGCATCCCCCCCGTGGCGGCAGGCTCAAGCACCCCCATCGTCCGAGA
CCGGGGCAGCAGCGCGCAAAGCGGAGGACGTGGACGACGGCTCGTACGTG
GACGAGATCTTGGAGGGCGTGAGTGGGCTGGGGCTGGGCAGTCTGGGCCC
CCTGCAAGGGGACTGGCTGCCGCAAATCGCCGCCATCCTGGAGCAGGTGC
ACCTCAAGAGCAAGGAGCGAGACCCAGAGGCTCCCGACATTGGTGGCGTG
GCGGAATACCTGCGGCGTCTGGACATTCGGAAACGACGGGCGTCCCTGTC
CCCCTCCCCCATGGGAGACAGCCAGGACCAGACCCGAGGGAGGGAGGGGG
GGAGGGAGGGAGGGAGGGAGGGCGGGAGGGAGGGAGGGGGAATGGCCCAG
GTGCATCAGCTTTCCCCGCCCTCCCCCGTGTCGCGCCATGCTGGGGGCAA
GCCGCCGCGCGACCAGACTGTCGCGGCCTCCCTGACCCCTCGCCCAGACT
CCGGGTCGGTTTTTACAAGCCCGGGGCCCGACGGGAGGGAGAGGGCGGAG
GGGGGGAAAGCAGCAGCAGGGGCGGGGACGGAGGGTGACAAGGAGGGACA
GGGGGTTGGGGCAGAGGAGCATGCGTCGCACGTGGCGAGGGCGCCCCTGC
CCATGCCGGCCTGCGCCACGTCCTCAGGCCCCGCCGCCAATCCGGACCTC
AGCTTCCGTTGCCTCGGGCCAT back to top
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