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Properties
| Property Name | Value |
|---|
| Product | Zn(2)-C6 fungal-type DNA-binding domain protein |
| Orig transcript id | gnl|cribi|Naga_100194g7.7133.mrna |
| Orig protein id | gnl|cribi|Naga_100194g7.7133 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:801406..803281 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3609 ID=rna3609|Name=rna3609|organism=Nannochloropsis gaditana|type=mRNA|length=477bp
ATGGCGTCCTCCCTGCCCTCTCGGGTCCAATACACCAGCACTCAAGCCTT
CCTGATGCAGGAGCAGCAGGGGCCGGTGCCGTCGGTCTCAAGCACGTGGG
GCGACCCCTACCATCACCAGCAGTATCAGCAACAACGCCAGCAACAGCAG
CAGCAGCAGCCACAACAACACCAACAACAACCACAACAAGGTTTCCACCC
TATGCACTTCCAACATCAACCCCAGCAGTATCCCTACATGCCCCCACTGA
TTGGACAGGCCCGGTTTTGGCCGAGCGTGGGAGACATACGATGCGATGGC
GATTCTCCTGAACGGCTGGGAGGGGGAGGGGAGAGCACAGAGGCCCTGAT
GTATGCATGTGGGGGCTCGAGGCACAGGAAGAAAGGTGCGAGGGCAGCGG
AGAAATCGCTGGTACAGGGTCAGAGGACATGGCGCGTCGAGAAAGAAAAA
GGGCGCCCGAGGTCAAAAGCCTCCTGA back to topprotein sequence of rna3609 >rna3609-protein ID=rna3609-protein|Name=rna3609|organism=Nannochloropsis gaditana|type=polypeptide|length=378bp
MVVPLDRMQATDLKAAGAPAPAQPRRTCTACKASKVKCDRQAPVCGRCAR
LRLTCVQQPRAQGRPMKSKSSESEGIISPEGMIESTLATREATPARAVSS
ETSTQWAADYMAFTFSNLLKSGAVHRMKTFAVLRVWMLFSMYYGVDLTRG
FLSVALALMDASIQDLQRLPETMASSVALPPDQPAAEAASITSSTSSSSS
SSSTPVSSVDAAASAPLDPGVLQPFIASLDDGVSAVICCVGCRGGTGKVY
CNDKFKSTFFSSEDLTQRTLSESTLPVYVYACIIAPEDRAEFVDSLTNVC
FGTQTALPQVTHIVKVLDRQGSDFLAIVRLRCLTLNNGDYGADILTVEPA
PMSKYVLQTSDGAGTGQEGPGGEGGREG back to topmRNA from alignment at CM002461.1:801406..803281- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3609 ID=rna3609|Name=rna3609|organism=Nannochloropsis gaditana|type=mRNA|length=1876bp|location=Sequence derived from alignment at CM002461.1:801406..803281- (Nannochloropsis gaditana)
TCTCGTGCCACCGCCGTGTAGCTGGCGTCACGAACAGAAACATCACACAC
CAAACCATGCTCCAAAGTGTGCCACATCACGCGCCTAATCTTTTCTCGTG
CCTCTCCTTGCCTACAGTAGCATGGTGGTGCCCCTGGACCGCATGCAAGC
CACCGACTTGAAAGCAGCGGGCGCCCCGGCCCCCGCCCAACCTAGGAGGA
CGTGCACTGCTTGTAAAGCAAGCAAGGTCAAATGCGATCGGCAAGCCCCC
GTTTGTGGCAGGTATGTCTTCATGAACTCACCAGGGGCTTCAGATAGTGC
AATAAAAATTCTTTTGTGCATGGACATACGACGGGGTTCCATAATCATGT
TGCGTCACCCACAGATGCGCCCGCCTCCGGCTGACATGCGTCCAGCAACC
ACGTGCCCAAGGGCGCCCCATGAAGGTATGGTAGCTTCGAATGATGAATT
TAGGTCATCTGGAACCTATTCACACAATGTTCATGCTTGTAGTTGTTGAA
ATGGCGGCCCTTCAACATGTGGAGGAGGGTATGGAAGATGCACGGAAGCT
TGATACGGAGGGGCTTACAATCTTGTACGACACACACCAAAATAGTCGAA
GTCTTCGGAGAGCGAGGGCATTATCAGTCCCGAAGGAATGATAGAAAGCA
CCCTAGCCACGCGGGAGGCCACTCCGGCACGCGCCGTATCAAGCGAAACG
TCCACCCAGTGGGCCGCGGACTACATGGCCTTTACATTCTCCAACCTGCT
CAAGTCCGGCGCAGTCCATCGCATGAAAACCTTCGCTGTGCTGTAAGTGT
TCTCTCCTTGTACTCTTTCGTGCAGCCTGCATATTTTTCCCCTTATTAAA
TCGGCCCTCCCCCCTACCTCGCACATAATCATGCCGAGGAAATCCTACCG
CTTTGATGTCTCCCGCGGGTCGCGCCCGATTGTCGCCGCTTACCTACAGC
TCACCTTTCGTTTATCTGTTTCCCCTTTTCGTTTTGCCCAATCCTCATGT
TTTTCTTCCCAGGCGCGTCTGGATGCTGTTCAGCATGTACTACGGCGTCG
ACCTGACCCGGGGCTTCCTCTCTGTGGCCTTGGCCTTGATGGATGCCTCC
ATCCAAGACCTCCAGCGTCTTCCCGAGACAATGGCCAGTAGCGTAGCCCT
CCCCCCTGATCAACCCGCCGCCGAGGCCGCCTCCATCACCTCCTCCACCT
CCTCTTCCTCTTCCTCCTCCTCCACCCCCGTCTCCTCGGTAGATGCCGCC
GCCTCCGCTCCCCTCGACCCCGGCGTCCTCCAGCCTTTCATCGCCTCTTT
AGACGACGGCGTATCTGCGGTTATTTGCTGCGTGGGCTGTCGCGGGGGCA
CCGGCAAGGTTTACTGCAACGACAAGTTCAAATCCACCTTCTTCTCCTCG
GAGGACCTGACCCAAAGGACGCTGAGCGAGAGCACCCTCCCCGTCTACGT
TTACGCCTGCATCATTGCGCCGGAAGACCGGGCCGAGTTTGTGGACTCGC
TGACGAACGTCTGCTTCGGGACCCAGACGGCGCTCCCGCAGGTGACGCAC
ATCGTCAAGGTACTGGACAGGCAAGGGAGCGACTTCCTCGCCATCGTCCG
CCTGCGTTGCTTGACGCTCAACAACGGGGACTACGGCGCAGATATTTTGA
CGGTGGAGCCCGCGCCCATGTCCAAGTACGTGTTGCAGACCAGCGACGGG
GCTGGGACGGGGCAGGAAGGGCCGGGGGGGGAGGGGGGGAGGGAAGGGTG
AGCGGAGACGTGTCGGTAACGTCGTCGGCGGAAGGGGAGGGCTCCTCCGA
TGGCACTGGCCACGAGAGCATGGAGTCGCCGCGTTGGAAGAGGGATGCGG
GACAGAAAGGAGCGAGGGAGGGGGAG back to topCoding sequence (CDS) from alignment at CM002461.1:801406..803281- >rna3609 ID=rna3609|Name=rna3609|organism=Nannochloropsis gaditana|type=CDS|length=4548bp|location=Sequence derived from alignment at CM002461.1:801406..803281- (Nannochloropsis gaditana)
GCGCGTCTGGATGCTGTTCAGCATGTACTACGGCGTCGACCTGACCCGGG
GCTTCCTCTCTGTGGCCTTGGCCTTGATGGATGCCTCCATCCAAGACCTC
CAGCGTCTTCCCGAGACAATGGCCAGTAGCGTAGCCCTCCCCCCTGATCA
ACCCGCCGCCGAGGCCGCCTCCATCACCTCCTCCACCTCCTCTTCCTCTT
CCTCCTCCTCCACCCCCGTCTCCTCGGTAGATGCCGCCGCCTCCGCTCCC
CTCGACCCCGGCGTCCTCCAGCCTTTCATCGCCTCTTTAGACGACGGCGT
ATCTGCGGTTATTTGCTGCGTGGGCTGTCGCGGGGGCACCGGCAAGGTTT
ACTGCAACGACAAGTTCAAATCCACCTTCTTCTCCTCGGAGGACCTGACC
CAAAGGACGCTGAGCGAGAGCACCCTCCCCGTCTACGTTTACGCCTGCAT
CATTGCGCCGGAAGACCGGGCCGAGTTTGTGGACTCGCTGACGAACGTCT
GCTTCGGGACCCAGACGGCGCTCCCGCAGGTGACGCACATCGTCAAGGTA
CTGGACAGGCAAGGGAGCGACTTCCTCGCCATCGTCCGCCTGCGTTGCTT
GACGCTCAACAACGGGGACTACGGCGCAGATATTTTGACGGTGGAGCCCG
CGCCCATGTCCAAGTACGTGTTGCAGACCAGCGACGGGGCTGGGACGGGG
CAGGAAGGGCCGGGGGGGGAGGGGGGGAGGGAAGGGTGATCGAAGTCTTC
GGAGAGCGAGGGCATTATCAGTCCCGAAGGAATGATAGAAAGCACCCTAG
CCACGCGGGAGGCCACTCCGGCACGCGCCGTATCAAGCGAAACGTCCACC
CAGTGGGCCGCGGACTACATGGCCTTTACATTCTCCAACCTGCTCAAGTC
CGGCGCAGTCCATCGCATGAAAACCTTCGCTGTGCTATGCGCCCGCCTCC
GGCTGACATGCGTCCAGCAACCACGTGCCCAAGGGCGCCCCATGAAGATG
GTGGTGCCCCTGGACCGCATGCAAGCCACCGACTTGAAAGCAGCGGGCGC
CCCGGCCCCCGCCCAACCTAGGAGGACGTGCACTGCTTGTAAAGCAAGCA
AGGTCAAATGCGATCGGCAAGCCCCCGTTTGTGGCAGGCGCGTCTGGATG
CTGTTCAGCATGTACTACGGCGTCGACCTGACCCGGGGCTTCCTCTCTGT
GGCCTTGGCCTTGATGGATGCCTCCATCCAAGACCTCCAGCGTCTTCCCG
AGACAATGGCCAGTAGCGTAGCCCTCCCCCCTGATCAACCCGCCGCCGAG
GCCGCCTCCATCACCTCCTCCACCTCCTCTTCCTCTTCCTCCTCCTCCAC
CCCCGTCTCCTCGGTAGATGCCGCCGCCTCCGCTCCCCTCGACCCCGGCG
TCCTCCAGCCTTTCATCGCCTCTTTAGACGACGGCGTATCTGCGGTTATT
TGCTGCGTGGGCTGTCGCGGGGGCACCGGCAAGGTTTACTGCAACGACAA
GTTCAAATCCACCTTCTTCTCCTCGGAGGACCTGACCCAAAGGACGCTGA
GCGAGAGCACCCTCCCCGTCTACGTTTACGCCTGCATCATTGCGCCGGAA
GACCGGGCCGAGTTTGTGGACTCGCTGACGAACGTCTGCTTCGGGACCCA
GACGGCGCTCCCGCAGGTGACGCACATCGTCAAGGTACTGGACAGGCAAG
GGAGCGACTTCCTCGCCATCGTCCGCCTGCGTTGCTTGACGCTCAACAAC
GGGGACTACGGCGCAGATATTTTGACGGTGGAGCCCGCGCCCATGTCCAA
GTACGTGTTGCAGACCAGCGACGGGGCTGGGACGGGGCAGGAAGGGCCGG
GGGGGGAGGGGGGGAGGGAAGGGTGATCGAAGTCTTCGGAGAGCGAGGGC
ATTATCAGTCCCGAAGGAATGATAGAAAGCACCCTAGCCACGCGGGAGGC
CACTCCGGCACGCGCCGTATCAAGCGAAACGTCCACCCAGTGGGCCGCGG
ACTACATGGCCTTTACATTCTCCAACCTGCTCAAGTCCGGCGCAGTCCAT
CGCATGAAAACCTTCGCTGTGCTATGCGCCCGCCTCCGGCTGACATGCGT
CCAGCAACCACGTGCCCAAGGGCGCCCCATGAAGATGGTGGTGCCCCTGG
ACCGCATGCAAGCCACCGACTTGAAAGCAGCGGGCGCCCCGGCCCCCGCC
CAACCTAGGAGGACGTGCACTGCTTGTAAAGCAAGCAAGGTCAAATGCGA
TCGGCAAGCCCCCGTTTGTGGCAGGCGCGTCTGGATGCTGTTCAGCATGT
ACTACGGCGTCGACCTGACCCGGGGCTTCCTCTCTGTGGCCTTGGCCTTG
ATGGATGCCTCCATCCAAGACCTCCAGCGTCTTCCCGAGACAATGGCCAG
TAGCGTAGCCCTCCCCCCTGATCAACCCGCCGCCGAGGCCGCCTCCATCA
CCTCCTCCACCTCCTCTTCCTCTTCCTCCTCCTCCACCCCCGTCTCCTCG
GTAGATGCCGCCGCCTCCGCTCCCCTCGACCCCGGCGTCCTCCAGCCTTT
CATCGCCTCTTTAGACGACGGCGTATCTGCGGTTATTTGCTGCGTGGGCT
GTCGCGGGGGCACCGGCAAGGTTTACTGCAACGACAAGTTCAAATCCACC
TTCTTCTCCTCGGAGGACCTGACCCAAAGGACGCTGAGCGAGAGCACCCT
CCCCGTCTACGTTTACGCCTGCATCATTGCGCCGGAAGACCGGGCCGAGT
TTGTGGACTCGCTGACGAACGTCTGCTTCGGGACCCAGACGGCGCTCCCG
CAGGTGACGCACATCGTCAAGGTACTGGACAGGCAAGGGAGCGACTTCCT
CGCCATCGTCCGCCTGCGTTGCTTGACGCTCAACAACGGGGACTACGGCG
CAGATATTTTGACGGTGGAGCCCGCGCCCATGTCCAAGTACGTGTTGCAG
ACCAGCGACGGGGCTGGGACGGGGCAGGAAGGGCCGGGGGGGGAGGGGGG
GAGGGAAGGGTGATCGAAGTCTTCGGAGAGCGAGGGCATTATCAGTCCCG
AAGGAATGATAGAAAGCACCCTAGCCACGCGGGAGGCCACTCCGGCACGC
GCCGTATCAAGCGAAACGTCCACCCAGTGGGCCGCGGACTACATGGCCTT
TACATTCTCCAACCTGCTCAAGTCCGGCGCAGTCCATCGCATGAAAACCT
TCGCTGTGCTATGCGCCCGCCTCCGGCTGACATGCGTCCAGCAACCACGT
GCCCAAGGGCGCCCCATGAAGATGGTGGTGCCCCTGGACCGCATGCAAGC
CACCGACTTGAAAGCAGCGGGCGCCCCGGCCCCCGCCCAACCTAGGAGGA
CGTGCACTGCTTGTAAAGCAAGCAAGGTCAAATGCGATCGGCAAGCCCCC
GTTTGTGGCAGGCGCGTCTGGATGCTGTTCAGCATGTACTACGGCGTCGA
CCTGACCCGGGGCTTCCTCTCTGTGGCCTTGGCCTTGATGGATGCCTCCA
TCCAAGACCTCCAGCGTCTTCCCGAGACAATGGCCAGTAGCGTAGCCCTC
CCCCCTGATCAACCCGCCGCCGAGGCCGCCTCCATCACCTCCTCCACCTC
CTCTTCCTCTTCCTCCTCCTCCACCCCCGTCTCCTCGGTAGATGCCGCCG
CCTCCGCTCCCCTCGACCCCGGCGTCCTCCAGCCTTTCATCGCCTCTTTA
GACGACGGCGTATCTGCGGTTATTTGCTGCGTGGGCTGTCGCGGGGGCAC
CGGCAAGGTTTACTGCAACGACAAGTTCAAATCCACCTTCTTCTCCTCGG
AGGACCTGACCCAAAGGACGCTGAGCGAGAGCACCCTCCCCGTCTACGTT
TACGCCTGCATCATTGCGCCGGAAGACCGGGCCGAGTTTGTGGACTCGCT
GACGAACGTCTGCTTCGGGACCCAGACGGCGCTCCCGCAGGTGACGCACA
TCGTCAAGGTACTGGACAGGCAAGGGAGCGACTTCCTCGCCATCGTCCGC
CTGCGTTGCTTGACGCTCAACAACGGGGACTACGGCGCAGATATTTTGAC
GGTGGAGCCCGCGCCCATGTCCAAGTACGTGTTGCAGACCAGCGACGGGG
CTGGGACGGGGCAGGAAGGGCCGGGGGGGGAGGGGGGGAGGGAAGGGTGA
TCGAAGTCTTCGGAGAGCGAGGGCATTATCAGTCCCGAAGGAATGATAGA
AAGCACCCTAGCCACGCGGGAGGCCACTCCGGCACGCGCCGTATCAAGCG
AAACGTCCACCCAGTGGGCCGCGGACTACATGGCCTTTACATTCTCCAAC
CTGCTCAAGTCCGGCGCAGTCCATCGCATGAAAACCTTCGCTGTGCTATG
CGCCCGCCTCCGGCTGACATGCGTCCAGCAACCACGTGCCCAAGGGCGCC
CCATGAAGATGGTGGTGCCCCTGGACCGCATGCAAGCCACCGACTTGAAA
GCAGCGGGCGCCCCGGCCCCCGCCCAACCTAGGAGGACGTGCACTGCTTG
TAAAGCAAGCAAGGTCAAATGCGATCGGCAAGCCCCCGTTTGTGGCAG back to top
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