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Properties
| Property Name | Value |
|---|
| Product | tetrapyrrole methylase family protein |
| Orig transcript id | gnl|cribi|Naga_100194g14.7132.mrna |
| Orig protein id | gnl|cribi|Naga_100194g14.7132 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:792551..793914 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3603 ID=rna3603|Name=rna3603|organism=Nannochloropsis gaditana|type=mRNA|length=4392bp
CACATAGATAGACTGGTCCATTGTCACATTGTTGCACCTGACCGACGCTG
GAGGGTCGTCCTTGATGCAAATACCGGCCTAGCACCTCGACGCAATCGCC
CCCTCACTCCGCCAGGCCCCACGAGGGGGCTATCACCATGGGAACGCCGG
AGCATGATGGCATTATCATCCCTATTCGAGGTTCACAGCGTGCAGAATGC
GTACATCTGCTGGCCGAAGATTTGCCTGATGTGAGTGACTCCGCGGAGTT
CGACGCCATTCTCCAGATCTTACAGGCCGAGTTCGCCTTACCAGACGTGT
GGGCGGATGTGGCCGAGGCCTACTACTGCAAGGGGCGACCTGACCTCTTC
CGACAAGTGCTGCATTTGCTTCGGGATGGTTTGAAGGAAGCGGGGGTACA
AGAGGAAATGGAGGGGAATACGGAGGCTCAGAAAAGGGAGTTTCGAAGAG
GGCTTGTACGCGTCTACAATATGCTAGGTGCACTGGCGACACAGGAGGCG
ATCAAATTCAAGCGTGCGGAGGACGAAGAGCGGCGGATGGAAATGTGGGA
CGTAGCCAAGCACAATCTTGACGTTGCGGACACGGTGGTGCAATACGCCG
AGCCTACGCTTCTGAATAAAGGTTGGATGGCCATGAATTTGAGCGCGGGG
AGCACCTGGAAGCACGCCAAGTACCTGTTCAACAACGCCATCACCGAGGC
GAACAATCGAGGCGGACAGAATCTGATGGCCATGCTCGGTCTCGCCATCC
ATGCTTTTCACGTGAACACGCCTGCCGAACTCAGGCGGGCGCGGAAGCTC
TTGGGCGAGGTGATCCGCCGCCATCCCCAGTGCCCCGCGGAAGTGCGCGT
GGGCTTCGGCCTCTGCTGCTACCGGCTGGGAGAGGTTGACCGAGCCAAGG
CTGCCTTCAAGCGTGCGCTTGTCTTGAGTCGGGGCAATCGCTTCGCCATG
CTGGCCTTGGCCCGGGCGGAGCTCGCCGACGCGGAGCCGGACGAGTACTT
GGACACTCTGGATCGCGTTGTGAGGATGCAGACGGCCGCCTACGTGCAGG
ACGAGAAGGATCCCCTGGCCCTTGTCAGCCTGGCCACCTACTACCTTCAC
AAGTGGTTCCCGGTGGGGGCGCAAGCCGTGCGGGTGGTGGAGGGGAGCGA
GAAGGTGGAGTTGGAGGCCGCCAGGGGGGCGGGGGATCGACCCCATCGCT
TGGAGCGGGGCGACCTGATACGCATCGGGCCTGTCTTTACCTGCCGGGTG
TTGGACGTGGTGGACGTAGGGGGGAAAGGGGCAGAGGGCAGGACAAGCTT
GACTTTGGATCGCGCCTTCCACGGGCGGGGCCTGGCCCCCGAGGCCGTCC
AGGAGGACGGGCATGCGCCCCACTTCCCGACCTTGTCGATCTACCGCAAG
GATTTCAGGCAGGCCATGGCCCTGGTCGACCGCGCGCTTGCCCGCCCGGA
AGACCTCGCGCCTGCGGAGTTACGGGCTGAGGCCATCTTTGTAAAGGCGC
AAGTGGTTCATCAACTCGATGATTTCGAGTCCGCGCTGATCTACTACCGG
GATGCCTGTGAGCTCTGCCCTTCTCTAGCCCCCGCCCAGTACGGCCACGC
GCAAATGCTGGCAGCACAGAGCCGCACCCTGGCGCTGAAAGACAGGAAGG
AGGAGGCTGTGGCCCGCCTCGGGGAGGCGGTGGCGGCCCTGAACCGCGTC
CTCGACATGGTGCCCCACGACCCAGACACGCTCACTCTGCTGGGCCTGCT
GCTTGCCGAGCAGCACCAGCTCGCCGCCGATAAGCACGAGGCCCTCGACA
AGCTGCGGCGGGCTGTGGAATTGCGCCCGGACGTGAAGGAGACGTGGGTG
GCGCTTGGTCAGGTGCATCAACGGGCCCCCGGTGCCGACCCCAAGGAGGC
TCTCCGCTGCTTGTTGGAGGCGGAACGGCTGATCCTCCAGCGACAGGAGG
TCGTCCCTGCCCCTTTGTTGAGCAACGTGGGCGCCCTCCTCCACGTGAAG
GGAGAACAAGGCGGGGCCCGCGAGTACTACCGACGGGCGCTGGAGGCCTA
CGCTAGCACTGGGGGCTCCGGTTTGGGGGAGCTGGAGGCGCAATATTTGC
CCTCGGAGCAGCCCATTCAGCACCCGAGGAACGCGGTCTTCTGGCGCTGG
GAAGACGTGCCGGGCATGACCGTGCGGCTGGAAGAAGGTTCAAGGGCGGC
GGCTGTGGTGGGGAGCGGCCCCGAGGGACTGACGGGCCTGCAGCCTGGCG
ACCACGTTCGATTCGCGCTGGGACCGGGCCCGCGGGAGGCATTTGTTTCG
GTGGTGGTAGATGAGAAGGCGGAGGACGATATGATGGGCGGGGCCAGCGG
GGATCTGTGTCTGAAGCACACCTTCTTCCTTGCCACCCCGCCCGACCCGG
TGCCCGTGGCTGTCAAGCGGAGTCGGGGGCTGCTGCGGCATGAGACCCTG
ACCACCGTGTTCAACCTGGCCATGATCCACCAGGACATGGGCGAGTTGGC
GGCGGCCGAGGAGCTGCTTCTGGCCATCACGAAGCAGTACCCCTCCCACG
TGTCCGCGCACATCAAGTTGGGGATCCTTGCGCACGGGCAAGGTCACACG
AAACAGGCGGGCTCCTGGCTCGGGCGGGCCCGGCAGCTGGCGCCTCAGGA
CAAGGAGGTGGCGGCGGTGTGTGGTAAGGTCGAGCAGGACGCGGGCCATC
GCGACCAGGCCCAACGCTTGTTTGAGCCGTTGAACAAGGAGGGCGACCCC
TACGCCATGGTGGCGCTGGGGAATCTGTATTTCATGAACTCGGTCACTGT
GCCAGACAAGGCACACCACATGGGCCATGCCCGCGTCTACCACACCAAGG
TGCTTAAGAAGGACGCACGGAACCTGTACGCGGCCCACGGCCTGGGCTTG
GTCCTGGCGGAGGAGTTTGGAAAAGTGGAAGACGCGCGCGCAGTGCTGCA
GGCGGTGAGGGAGCGTTCCGGGGACAAACCGGACGAGATTTTGATCAACA
TTGCTCACCTGTTCGTGGCACAGAAACAACGCAACGCAGCGATCCATTGC
TACGAATCCTTCCTGAAGAAGCACCGGTTGTCGACCGACGGGTTGCATGT
CCGAGTCCTGGAATACGTAAGCCACGCGCACTTTCTGGAACGATCTTGGG
AGAAAGCTCTCCGGGCGATCCTCAAGGCCCTCCACGTGGAACCGGGCAAG
CCTGCGCTTGCTTTCAACGTGGGTTTGATCCTGGATGCCTCGGTTTCGGA
GTCCTTCAAACGAAGCAACGCGCAGCGGACGACGTCTGTCAGCGAGTCCC
GATCGGCCGAGCGAGACTTGTCTGTCGCGATCAGCGTCCTCTCCCGCCCG
GAACTCGCGCAGGCTTACCCCAAGGTGAAACGGAAGGTTGATTACATGAA
GGCCAATCTACAACTTGCCCGCCAATACGTCCAAGCGGAGGAGAAACGCT
TCCGTGAGGACGAGGAGTCCAGGACACGGCAGGCGGCCCTGGTGGCGGCG
GAGATGCGGAGGCGGGAGGAGGTCAAAAGGGCCGAGGAGGAGGAGAGGGA
GCGGGAAAAGGCGGCGGCGCGACAAGCTGCCTTGGAGAGGGACGAAGAAC
TGCGACGTTTGACTCTGCAGTGGGCACAGGAGCCAAGGGAGGCACCCCGA
GTGAGCAAGAAAGAGCTGGCACGCAAGGCGGGGGAGATTCTGTCGGATGG
GGAGGAGGAGGGGGAGGGGGCCGAGTTCGCGGAGCCAGAAATGCAGGGTT
TGGGCCCGGGCAGACAGGTCAGGCTGGCGAGTAGTAGCGAGGAGAGTAGC
AACGACAGTTCCGACGATGAGGACTATGGGATGCGGGGCGTCGAACCCGG
CCAGGGCCAAGGAGGAGGTGAGGAGGCGGGCGGGAAGGGGGTGCTTGGGC
CGGAGGGGAAGGGGGAAGGTGGGAAGGGAGAGGGGGGCGGGCAGGAGACG
GGGGAGGCTCGCAAACGGAAGGGAGAGGGAGAGGGGCCCCTCAGTCCGAA
GAAGCGGCGTGTGCAACGGACACGGGCGAGTGAGGACTCGGGGTCGGACG
AGGACGAGGAGCTCTTTGGAGGTAGGGAGAGCGCCCCCTCGATGCCGACC
ACCCAAGTCCTTCCCCCACTCTTGTCGCCCGCGGGAGATGCTGCCAGCTC
GCCGGCGGTCCCTGCTGGAGCGACTCTTGCGGAGGCGGAGGCCGCGCCCC
TCCCCCCTGCGGGGAGTGTGCCGAGTGGGGCCAGCGAGGCCTCGCCGGCG
GCCCGTTCCTCGGGCCGTCGAAGGGTCATGGCGGACGAAGAGGAGGAGGA
GGAGTCTGCCTGAGTGTCTGAGGGGGGTCCGATGGTGGAGCCCGAGAGAG
ATGAACGTAAATTGGAAAGAAATAACGATCTGAAGACCGACG back to topprotein sequence of rna3603 >rna3603-protein ID=rna3603-protein|Name=rna3603|organism=Nannochloropsis gaditana|type=polypeptide|length=437bp
MISSSKVRYCGKIFQSCVLLALPHPSYRAITCMRKKPSLPFLSILLLLAA
HCTTTDHVEGCIKVANIASTVRNHRLRAFVSPRRVLPHVRAVLSRKSYGV
GAGAPCTSTSRYCTSSTDHTEEDMPRRVPNKIMPGTIYFVSTPLGNLGDI
TLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPD
LIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAA
VAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNR
ILRTLTELREADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKEE
QGVSVEAGAFAPLRGEFTLVLGPRPRVARSQEEVSIAVQAMLRACLEEDG
MSASEAAKAASKTLGKEAGLAKSDMYKLAVEMKKPRS back to topmRNA from alignment at CM002461.1:792551..793914- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3603 ID=rna3603|Name=rna3603|organism=Nannochloropsis gaditana|type=mRNA|length=1364bp|location=Sequence derived from alignment at CM002461.1:792551..793914- (Nannochloropsis gaditana)
GTAACAAACCAAGGCAATCATGCGATGAATCGATACGAAGTACATGATAT
CATCAAGCAAAGTGAGATATTGTGGTAAGATTTTTCAGTCGTGTGTCCTT
TTGGCACTTCCACATCCATCTTACAGGGCCATTACCTGTATGAGGAAAAA
ACCTTCCCTTCCCTTTCTTTCTATTCTCCTTCTCCTCGCCGCCCACTGCA
CCACTACTGATCACGTAGAAGGTTGTATAAAGGTGGCAAACATTGCTTCA
ACGGTTCGTAACCATCGGCTCCGTGCCTTTGTTTCGCCCAGAAGGGTGTT
GCCCCACGTGCGGGCAGTCTTGTCAAGAAAAAGCTATGGTGTCGGAGCAG
GAGCTCCTTGCACCAGCACCTCTCGATATTGTACGAGCTCGACCGATCAC
ACCGAAGAAGATATGCCTCGACGAGTTCCAAATAAAATCATGCCAGGAAC
CATATATTTTGTATCCACTCCGCTGGGCAACCTAGGAGACATAACCTTGC
GGGCACTCGACGTGCTGCGAGGTGTTGATTTGATTGCTTCTGAAGACACA
CGGACCACAGGGCTCTTGCTCAAAGCGCTTGGTTTGGGAAAGAAGCCTCA
AGTAAGCCACCATCAACATAACATACAAAGCCGCGTGCCCGACCTGATCA
GGCGGGCTCAAGAGGAGAGGCTTTCCATCGCCGTGGTTTCTGACGCGGGG
ACTCCAGGGGTCTCCGACCCAGGAAGTGAGCTAGCGGCTGCCTGTTGGAC
TGCAGGCGTTCCTCTTGTCCCCGTCCCGGGGGCTTGTGCGGCTGTGGCGG
CGATAAGTGTTGCGGGCTTCCCCTCCACTGAGTTCACATTCATCGGCTTT
CTCCCCTCGAGAAGCGGGAAAGTTCGTCAAGCAGAAGTGGCCAAAGCGGC
AAGGGAGGAACGGCCTTGCATCCTGTACGAATCACCGAACCGCATCCTCC
GGACATTGACGGAATTGAGGGAGGCGGACGAGACGGGGGGTGGGCGCCTG
GTCCTAGTCGCCCGCGAGCTGACCAAGCTCCACGAAGACCTCTACCGTGG
CACCCTGACGGAGGCCTTGGCCCATTTCGGAGGCAAGGAAGAGCAAGGGG
TATCCGTGGAGGCGGGCGCTTTCGCACCTCTCCGGGGGGAGTTCACCTTG
GTGCTGGGGCCTCGGCCTCGGGTGGCGCGCTCCCAGGAAGAAGTGAGCAT
CGCCGTGCAGGCGATGCTTAGGGCCTGCCTGGAGGAGGACGGCATGTCCG
CGTCCGAGGCGGCCAAGGCGGCCAGCAAGACCCTGGGGAAGGAGGCCGGG
CTCGCAAAGTCGGACATGTACAAACTTGCTGTCGAAATGAAAAAGCCCCG
AAGCTGACCTCGCC back to topCoding sequence (CDS) from alignment at CM002461.1:792551..793914- >rna3603 ID=rna3603|Name=rna3603|organism=Nannochloropsis gaditana|type=CDS|length=1314bp|location=Sequence derived from alignment at CM002461.1:792551..793914- (Nannochloropsis gaditana)
ATGATATCATCAAGCAAAGTGAGATATTGTGGTAAGATTTTTCAGTCGTG
TGTCCTTTTGGCACTTCCACATCCATCTTACAGGGCCATTACCTGTATGA
GGAAAAAACCTTCCCTTCCCTTTCTTTCTATTCTCCTTCTCCTCGCCGCC
CACTGCACCACTACTGATCACGTAGAAGGTTGTATAAAGGTGGCAAACAT
TGCTTCAACGGTTCGTAACCATCGGCTCCGTGCCTTTGTTTCGCCCAGAA
GGGTGTTGCCCCACGTGCGGGCAGTCTTGTCAAGAAAAAGCTATGGTGTC
GGAGCAGGAGCTCCTTGCACCAGCACCTCTCGATATTGTACGAGCTCGAC
CGATCACACCGAAGAAGATATGCCTCGACGAGTTCCAAATAAAATCATGC
CAGGAACCATATATTTTGTATCCACTCCGCTGGGCAACCTAGGAGACATA
ACCTTGCGGGCACTCGACGTGCTGCGAGGTGTTGATTTGATTGCTTCTGA
AGACACACGGACCACAGGGCTCTTGCTCAAAGCGCTTGGTTTGGGAAAGA
AGCCTCAAGTAAGCCACCATCAACATAACATACAAAGCCGCGTGCCCGAC
CTGATCAGGCGGGCTCAAGAGGAGAGGCTTTCCATCGCCGTGGTTTCTGA
CGCGGGGACTCCAGGGGTCTCCGACCCAGGAAGTGAGCTAGCGGCTGCCT
GTTGGACTGCAGGCGTTCCTCTTGTCCCCGTCCCGGGGGCTTGTGCGGCT
GTGGCGGCGATAAGTGTTGCGGGCTTCCCCTCCACTGAGTTCACATTCAT
CGGCTTTCTCCCCTCGAGAAGCGGGAAAGTTCGTCAAGCAGAAGTGGCCA
AAGCGGCAAGGGAGGAACGGCCTTGCATCCTGTACGAATCACCGAACCGC
ATCCTCCGGACATTGACGGAATTGAGGGAGGCGGACGAGACGGGGGGTGG
GCGCCTGGTCCTAGTCGCCCGCGAGCTGACCAAGCTCCACGAAGACCTCT
ACCGTGGCACCCTGACGGAGGCCTTGGCCCATTTCGGAGGCAAGGAAGAG
CAAGGGGTATCCGTGGAGGCGGGCGCTTTCGCACCTCTCCGGGGGGAGTT
CACCTTGGTGCTGGGGCCTCGGCCTCGGGTGGCGCGCTCCCAGGAAGAAG
TGAGCATCGCCGTGCAGGCGATGCTTAGGGCCTGCCTGGAGGAGGACGGC
ATGTCCGCGTCCGAGGCGGCCAAGGCGGCCAGCAAGACCCTGGGGAAGGA
GGCCGGGCTCGCAAAGTCGGACATGTACAAACTTGCTGTCGAAATGAAAA
AGCCCCGAAGCTGA back to top
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