EWM27080.1, cds3594 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27080.1 vs. NCBI_GenBank
Match: gi|585109255|gb|EWM27080.1| (tetrapyrrole methylase family protein [Nannochloropsis gaditana]) HSP 1 Score: 885.945 bits (2288), Expect = 0.000e+0 Identity = 437/437 (100.00%), Postives = 437/437 (100.00%), Query Frame = 0
Query: 1 MISSSKVRYCGKIFQSCVLLALPHPSYRAITCMRKKPSLPFLSILLLLAAHCTTTDHVEGCIKVANIASTVRNHRLRAFVSPRRVLPHVRAVLSRKSYGVGAGAPCTSTSRYCTSSTDHTEEDMPRRVPNKIMPGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKEEQGVSVEAGAFAPLRGEFTLVLGPRPRVARSQEEVSIAVQAMLRACLEEDGMSASEAAKAASKTLGKEAGLAKSDMYKLAVEMKKPRS 437
MISSSKVRYCGKIFQSCVLLALPHPSYRAITCMRKKPSLPFLSILLLLAAHCTTTDHVEGCIKVANIASTVRNHRLRAFVSPRRVLPHVRAVLSRKSYGVGAGAPCTSTSRYCTSSTDHTEEDMPRRVPNKIMPGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKEEQGVSVEAGAFAPLRGEFTLVLGPRPRVARSQEEVSIAVQAMLRACLEEDGMSASEAAKAASKTLGKEAGLAKSDMYKLAVEMKKPRS
Sbjct: 1 MISSSKVRYCGKIFQSCVLLALPHPSYRAITCMRKKPSLPFLSILLLLAAHCTTTDHVEGCIKVANIASTVRNHRLRAFVSPRRVLPHVRAVLSRKSYGVGAGAPCTSTSRYCTSSTDHTEEDMPRRVPNKIMPGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKEEQGVSVEAGAFAPLRGEFTLVLGPRPRVARSQEEVSIAVQAMLRACLEEDGMSASEAAKAASKTLGKEAGLAKSDMYKLAVEMKKPRS 437
BLAST of EWM27080.1 vs. NCBI_GenBank
Match: gi|553190220|ref|XP_005855150.1| (tetrapyrrole methylase family protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293911|gb|EKU21211.1| tetrapyrrole methylase family protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
Query: 47 LLAAHCTTTDHVEGCIKVANIASTVRNHRLRAFVSPRRVLPHVRAVLSRKSYGVGAGAPCTSTSRYCTSSTDHTEEDMPRRVPNKIMPGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADE 313
LLAAHCTTTDHVEGCIKVANIASTVRNHRLRAFVSPRRVLPHVRAVLSRKSYGVGAGAPCTSTSRYCTSSTDHTEEDMPRRVPNKIMPGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADE
Sbjct: 1 LLAAHCTTTDHVEGCIKVANIASTVRNHRLRAFVSPRRVLPHVRAVLSRKSYGVGAGAPCTSTSRYCTSSTDHTEEDMPRRVPNKIMPGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADE 267
BLAST of EWM27080.1 vs. NCBI_GenBank
Match: gi|648408664|ref|WP_026100415.1| (rRNA (cytidine-2'-O-)-methyltransferase [Fortiea contorta]) HSP 1 Score: 242.276 bits (617), Expect = 8.990e-74 Identity = 136/302 (45.03%), Postives = 194/302 (64.24%), Query Frame = 0
Query: 134 PGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKEEQGVSVEAGAFAPLRGEFTLVLGPRPRVARSQEEVSIAVQAMLRACLEEDGMSASEAAKAASKTLGKEAGLAKSDMYKLAVEMKKP 435
PGT+Y V+TP+GNL DITLRA+ +L+ VDLIA+EDTR TG LL+ L + K PQ+S+H+HN SR+P+L+ R +IA+VSDAG PG+SDPG EL AC TAG+ +VP+PGA AA+ A+S +G P+ F F GFLP++ + R+ ++ E R I YESP+R+ TL +L AD G R +++ARELTKL+E+ +RGT+ EA+AH+ +E Q GE+TLVL A SQE +S++ L G+S S+ AS+ L K L + +Y++A+ ++ P
Sbjct: 7 PGTLYVVATPIGNLEDITLRAVRILQTVDLIAAEDTRHTGKLLQHLQI-KTPQISYHEHNRHSRIPELLAHL-NNRQAIALVSDAGMPGISDPGYELVGACITAGIRVVPIPGASAAITALSASGLPTDRFVFEGFLPAKEQR-RREQLEFLQTESRTLIFYESPHRLRNTLQDL--ADILGSDRQIVLARELTKLYEEFWRGTIAEAIAHYHQREPQ-------------GEYTLVLAG---AASSQEFLSLSQLKTELQQLISQGISRSQ----ASRQLAKFTSLPRRQVYQIALAIELP 283
BLAST of EWM27080.1 vs. NCBI_GenBank
Match: gi|922860590|gb|KOO28458.1| (ribosomal RNA small subunit methyltransferase i [Chrysochromulina sp. CCMP291]) HSP 1 Score: 240.736 bits (613), Expect = 1.190e-72 Identity = 134/260 (51.54%), Postives = 174/260 (66.92%), Query Frame = 0
Query: 114 TSSTDHTEEDMPRRVPNKIMPGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKEEQGVSVEAGAFAPLRGEFTLVLGP 373
T S + + +++P I T+Y+V+TP+GNL DITLRA+ LR VD++A+EDTR T LL+ L +G K V+HH HN+ S VP LI E S+AVVSDAGTPG+SDPG LAA C +P+VPVPGACAAVAAISV+GF STEF F GFLP RSG R+A +A+ E R +LYE+P+R+L TL +L+ A GGR V+VARE+TKLHE+ +RGT+ A A + E+ LRGEF +V+ P
Sbjct: 8 TESAELSADELPMSTGAPIEARTLYYVATPIGNLEDITLRAVRTLREVDVVATEDTRVTLGLLRHLHIGPKKLVAHHDHNLASSVPKLIE-LLEGGASVAVVSDAGTPGISDPGLALAAECARRSIPIVPVPGACAAVAAISVSGFVSTEFIFGGFLP-RSGSGRKARIAEMVGERRAVVLYEAPHRMLDTLGDLKMAG--AGGRGVVVAREMTKLHEEFHRGTIASAHAWYAAIAERD--------GKLRGEFAVVIAP 255
BLAST of EWM27080.1 vs. NCBI_GenBank
Match: gi|1214782317|ref|WP_088893471.1| (16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Leptolyngbya ohadii]) HSP 1 Score: 238.424 bits (607), Expect = 2.769e-72 Identity = 139/306 (45.42%), Postives = 191/306 (62.42%), Query Frame = 0
Query: 131 KIMPGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKEEQGVSVEAGAFAPLRGEFTLVLGPRPRVARSQEEVSIAVQAMLRACLEE---DGMSASEAAKAASKTLGKEAGLAKSDMYKLAVEMK 433
+I T+Y V TP+GNL D+T RA+ VL+ VD IA+EDTR TG LL+ + K PQ+S+H HN +SR DL+RR Q+ SIA+V+DAG PG+SDPG EL AC G+P+VP+PGA A V A+S AG P+ F F GFLP++ G RQA + E R + YE+P+R+ +TL +LREA G R +++ARELTKLHE +RGTL EA H+ +E A+ GEFTLV+ AR I ++ LRA L+E GMS S+ AS+ L + L + ++Y+LA+ ++
Sbjct: 2 EIQSATLYIVGTPIGNLEDMTFRAISVLQQVDFIAAEDTRHTGKLLQHFQV-KTPQISYHDHNRRSRQDDLLRRLQQGH-SIALVTDAGMPGISDPGYELVKACVEEGIPVVPIPGASAVVTALSAAGLPTDRFVFEGFLPAK-GTERQARLTALQTETRTIVCYEAPHRLRQTLKDLREA--FGDDRAIVLARELTKLHEQFWRGTLAEAEQHYQTQE---------AY----GEFTLVIAGGEPAAR------ILSESALRAELQELLRQGMSRSQ----ASRQLATQTHLPRRELYQLALSLE 279
BLAST of EWM27080.1 vs. NCBI_GenBank
Match: gi|553741947|ref|WP_023076095.1| (rRNA (cytidine-2'-O-)-methyltransferase [Leptolyngbya sp. Heron Island J] >gi|553081102|gb|ESA32999.1| 16s rrna methyltransferase [Leptolyngbya sp. Heron Island J]) HSP 1 Score: 236.113 bits (601), Expect = 1.473e-71 Identity = 134/304 (44.08%), Postives = 190/304 (62.50%), Query Frame = 0
Query: 135 GTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKEEQGVSVEAGAFAPLRGEFTLVLG---PRPRVARSQEEVSIAVQAMLRACLEEDGMSASEAAKAASKTLGKEAGLAKSDMYKLAVEMKKP 435
GT+Y V+TP+GNL DIT RA+ +L+ DLIA+EDTR TG LL + + PQ+S+H+HN QSR+P LI + Q ++ IA+VSDAG PG+SDPG EL AC AG+ + P+PG A V+AIS + PS FTF GFLP + GK R + + A E R +LYESP+R+L+TL +L+ GG R V VARELTK +E+ +RGT+ EA+ HF E RGEFT+ + P P+ + E + A L+ + + G+S S+ AS+ L + G+ K ++Y+L++ +K P
Sbjct: 5 GTLYLVATPIGNLEDITFRAIRILKEADLIAAEDTRHTGKLLHHFQI-ETPQISYHEHNAQSRIPQLIEKLQMGQI-IALVSDAGMPGISDPGYELVCACAEAGIIVSPIPGPAAVVSAISASALPSDRFTFEGFLPVK-GKARTERLTQLAAESRTMVLYESPHRLLKTLADLQA--HLGGDRRVTVARELTKRYEEFWRGTVDEAIEHFTTTEP-------------RGEFTVAIAGHTPSPKTLSNDE-----LLAQLKGLIAQ-GLSPSQ----ASRQLADQTGVPKREIYQLSLSLKPP 280
BLAST of EWM27080.1 vs. NCBI_GenBank
Match: gi|1200099438|ref|WP_087538967.1| (16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Nostocales cyanobacterium HT-58-2] >gi|1199828839|gb|ARV58653.1| 16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Nostocales cyanobacterium HT-58-2]) HSP 1 Score: 235.728 bits (600), Expect = 2.189e-71 Identity = 129/302 (42.72%), Postives = 190/302 (62.91%), Query Frame = 0
Query: 132 IMPGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKEEQGVSVEAGAFAPLRGEFTLVLGPRPRVARSQEEVSIAVQAMLRACLEEDGMSASEAAKAASKTLGKEAGLAKSDMYKLAVEMK 433
I PGT+Y V TP+GNL D+T RA+ L+ VDLIA+EDTR TG LL+ + K PQVS+H+HN SR+P+L+ + + + +IA+V+DAG PG+SDPG EL C AG+P+VP+PGA AA+ A+S AG P+ F F GFLP++ G+ R++ + E R I YESP R+ TL + A+ G R +++ARELTKL+E+ +RGT+ EA+AH+ ++ Q GE+TLV+ +P +Q ++S + G+S S+ AS+ L KE L + +Y+LA+ +K
Sbjct: 3 IKPGTLYVVGTPIGNLEDMTFRAVQTLQTVDLIAAEDTRHTGRLLQHFQI-KTPQVSYHEHNRSSRIPELLEQLSDGK-AIALVTDAGIPGISDPGYELVKVCIEAGIPVVPIPGANAAMTALSAAGLPTDRFVFEGFLPAK-GQQRRSHLEFLETEPRTLIFYESPYRLRDTLQDF--AEIFGNHRQIVIARELTKLYEEFWRGTIEEAIAHYSQRDPQ-------------GEYTLVVAGKP---PTQVQLSEEELKTELEKIMSQGISRSQ----ASRQLAKETSLPRRHLYQLALSIK 279
BLAST of EWM27080.1 vs. NCBI_GenBank
Match: gi|1054659627|ref|WP_066426766.1| (16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Anabaena sp. 4-3]) HSP 1 Score: 235.728 bits (600), Expect = 2.600e-71 Identity = 133/302 (44.04%), Postives = 196/302 (64.90%), Query Frame = 0
Query: 134 PGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKEEQGVSVEAGAFAPLRGEFTLVLGPRPRVARSQEEVSIAVQAMLRACLEE---DGMSASEAAKAASKTLGKEAGLAKSDMYKLAVEM 432
PGT+Y V TP+GNL DITLRA+ +L+GVDLIA+EDTR TG LL+ L + K PQ+S+H+HN SR+P+++ Q + ++A+VSDAG PG+SDPG EL AC A +P+VP+PGA A + A+S AG P+ +F F GFLP++S + R+ + E R ILYESP+R+ TL +L A+ G R +++ARELTKL+E+ +RG++ +A+AH+ +E Q GE+TLV+ P SQ + +A LRA LE+ G+S S+ AS+ L + L + +Y++A+ +
Sbjct: 7 PGTLYIVGTPIGNLEDITLRAVRILQGVDLIAAEDTRHTGKLLQHLQV-KTPQISYHEHNSSSRIPEILEHLQTGK-ALALVSDAGMPGISDPGYELVKACVEAQIPVVPIPGASAVITALSAAGLPTDKFVFEGFLPAKSQQ-RREHLEALQTEYRTIILYESPHRLRDTLQDL--AEMWGSDRQIVLARELTKLYEEFWRGSIGDAIAHYQQREPQ-------------GEYTLVVAGNP---PSQ---PLLTEAQLRAELEQLMRQGVSRSQ----ASRQLNQYTALNRRQVYQIALSI 280
BLAST of EWM27080.1 vs. NCBI_GenBank
Match: gi|1054615133|ref|WP_066383015.1| (16S rRNA (cytidine(1402)-2'-O)-methyltransferase [Anabaena sp. CA = ATCC 33047]) HSP 1 Score: 235.343 bits (599), Expect = 3.089e-71 Identity = 133/302 (44.04%), Postives = 196/302 (64.90%), Query Frame = 0
Query: 134 PGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKEEQGVSVEAGAFAPLRGEFTLVLGPRPRVARSQEEVSIAVQAMLRACLEE---DGMSASEAAKAASKTLGKEAGLAKSDMYKLAVEM 432
PGT+Y V TP+GNL DITLRA+ +L+GVDLIA+EDTR TG LL+ L + K PQ+S+H+HN SR+P+++ Q + ++A+VSDAG PG+SDPG EL AC A +P+VP+PGA A + A+S AG P+ +F F GFLP++S + R+ + E R ILYESP+R+ TL +L A+ G R +++ARELTKL+E+ +RG++ +A+AH+ +E Q GE+TLV+ P SQ + +A LRA LE+ G+S S+ AS+ L + L + +Y++A+ +
Sbjct: 7 PGTLYIVGTPIGNLEDITLRAVRILQGVDLIAAEDTRHTGKLLQHLQV-KTPQISYHEHNSSSRIPEILEHLQTGK-ALALVSDAGMPGISDPGYELVKACVEAQIPVVPIPGASAVITALSAAGLPTDKFVFEGFLPAKSQQ-RREHLEALQTESRTIILYESPHRLRDTLQDL--AEIWGSDRQIVLARELTKLYEEFWRGSIGDAIAHYQQREPQ-------------GEYTLVVAGNP---PSQ---PLLTEAQLRAELEQLMRQGVSRSQ----ASRQLNQYTALNRRQVYQIALSI 280
BLAST of EWM27080.1 vs. NCBI_GenBank
Match: gi|515885546|ref|WP_017316129.1| (rRNA (cytidine-2'-O-)-methyltransferase [Mastigocladopsis repens]) HSP 1 Score: 235.343 bits (599), Expect = 3.876e-71 Identity = 129/302 (42.72%), Postives = 189/302 (62.58%), Query Frame = 0
Query: 132 IMPGTIYFVSTPLGNLGDITLRALDVLRGVDLIASEDTRTTGLLLKALGLGKKPQVSHHQHNIQSRVPDLIRRAQEERLSIAVVSDAGTPGVSDPGSELAAACWTAGVPLVPVPGACAAVAAISVAGFPSTEFTFIGFLPSRSGKVRQAEVAKAAREERPCILYESPNRILRTLTELREADETGGGRLVLVARELTKLHEDLYRGTLTEALAHFGGKEEQGVSVEAGAFAPLRGEFTLVLGPRPRVARSQEEVSIAVQAMLRACLEEDGMSASEAAKAASKTLGKEAGLAKSDMYKLAVEMK 433
I PGT+Y V TP+GNL D+T RA+ L+ VDLIA+EDTR TG LL+ + K PQVS+H+HN SR+P+L+ + + + +IA+V+DAG PG+SDPG EL C AG+P+VP+PGA AA+ A+S AG P+ F F GFLP++ G+ R++ + E R I YESP+R+ TL +L E G R +++ARE+TKL+E+ +RGT+ EA+AH+ +E Q GE+TLV+ P +Q ++S + G+S S+ AS+ L K L + +Y+LA+ +K
Sbjct: 3 IKPGTLYVVGTPIGNLEDMTFRAVQTLQTVDLIAAEDTRHTGRLLQRFQV-KTPQVSYHEHNRSSRIPELLEQLSDGK-AIALVTDAGIPGISDPGYELVKVCVEAGIPVVPIPGANAAITALSAAGLPTDRFVFEGFLPAK-GQQRRSHLESLETEPRTLIFYESPHRLRGTLQDLEEI--FGTHRQIVIAREITKLYEEFWRGTIEEAIAHYSQREPQ-------------GEYTLVVAGTP---PTQAQLSEEELKAELEKIMSQGISRSQ----ASRQLAKATSLTRRQLYQLALAIK 279 The following BLAST results are available for this feature:
BLAST of EWM27080.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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