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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100003g136.1813.mrna |
| Orig protein id | gnl|cribi|Naga_100003g136.1813 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:877664..878312 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna360 ID=rna360|Name=rna360|organism=Nannochloropsis gaditana|type=mRNA|length=1881bp
ATGGCGTCTAGTATTTGTACACACCCTATCAGCATCATGCCGCCCAATCA
TTCGGATATAGACCAAGCACAGAATCGCCTTTCGCCCGCTTACCTCAGTT
GCGTTGCAGAGCTTGTCAAGGAATTGATGCATGCGTTTGACGCCCGAGTT
CCTACGAATTTGACAAGGTTAACAGCCGATTTAGCACGGAAGCGGAAACT
GAAAATCATGCCTCGTTTGATGGACATCATTGCTGCTGTCCCTGAGGAAT
ACAGGGATAAGTTGTTGCCTTTCATTAAATCGAAGCCGGTTCGTACGGCC
TCTGGTATCGCCGTCGTAGCAGTCATGTGCAAGCCTCACCGTTGTCCTCA
TATTGCGATGACTGGCAACGTCTGTGTATATTGTCCCGGCGGACCTGACT
CGGATTTTGAATACTCCACACAAGCCTATACTGGCTATGAGCCTACAAGT
ATGCGGGCCATTAGGGCGCGTTATCACCCGTATGCCCAGACGCGTGGGCG
GGTGGATCAACTTAAACGTTTGGGTCACAGCGTTGACAAGGTAGAATTTA
TCGTCATGGGTGGTACATTCATGTCCTTGAGCGAGGATTACAAAGACTGG
TTTATCCGCAATCTTCATGATGCTCTCTCTGGTCATTCGTCGGGCAGTGT
GGCCGAAGCTGTCGCCTACATGGAGCATAGCGAAAGTAAATGCATTGGTA
TTACTATCGAGACTAGGCCAGATTTTTGTCTTAAACCACATTTGAACGAG
ATGCTATCTTACGGCTGTACTCGCATCGAAATCGGAGTTCAGAGCATTTA
TGAGGACGTGGCTCGAGACACAAACCGAGGTCACACTGTTCACGCCGTGT
GTAACTCATTTCAACTGGCAAAGGAGTGCGGGTTCAAGGTCGTGACACAC
ATGATGCCAGATCTACCCAACATGGGCATGGAGAGGGATCTTTTAGGTTT
CCGCGAATTTTTTGAGAACCCTTTGTTCCGAGCAGATGGCTTGAAAATAT
ATCCTACTCTTGTTATCCGAGGCACAGGTTTATATGAGCTTTGGAAAACA
GGACAATACAAAAATTATACTCCCGACGAACTCATAGATTTGATGGCAAA
GATCTTATCTCTTGTCCCACCTTGGACTCGTATTTACCGTATCCAACGGG
ATATCCCAATGCCTCTCGTCACTGCCGGTGTTGAGAATGGTAATCTTAGA
GAGTTGGCGTTGCGCCGGATGGCTGAACTCGATCTTCCTTGTCGAGACGT
CCGGACGCGCGAAGTAGGTATTCGTCAAATTCATCAAAGTGCTCGCCCAC
ATGAGATTGAGCTTGTTCGTCGTGACTATACGGCAAATGGCGGATGGGAA
ACTTTTCTGAGCTACGAAGATCCTCACCAAGACATCCTTATTGGGTTGCT
ACGTCTCCGAAGGCCTAGCGCTGTTACATTTCGTCCTGAGATCCTGAACA
ATTTCTCTTCCGTTGTAAGGGAGCTGCATGTCTACGGCTCAGCCGTTCCC
TTACACGATAGAGATCCAAATAAATTTCAACACCAAGGTTACGGCAGGCT
TCTTATGGAGGAGGCAGAACGCATTGCCAAACATGAGCATGGTTCTGCGA
AGATAGTAGTGATAGCAGGAGTAGGAACTAGAAATTATTATCGCAAGCTC
GGATATGAACTGGAAGGGCCTTACATGAGTAAGTACTTGCAAAAAGGCAA
CAGACCACCCAAATGGCCTACAACTGTGAAATTTCCAACATTAACCTTGT
TTAGATTCAGCGCGCATCACATTGTCTTATTTAATGTGAATATCATGACT
ACAAGTTATCAGGTTCAAACTGACTACAAAGAAGTCAGTCGTCACAAATT
TCATTCATTTTTAGTGCCAAAAGGTATTTGA back to topprotein sequence of rna360 >rna360-protein ID=rna360-protein|Name=rna360|organism=Nannochloropsis gaditana|type=polypeptide|length=129bp
MNLTRYTFFISDMMHAATKLLGGRKQGATLPQVTWRKRNKVALIALCEKI
SLYNCVMACIHACNFASIVIYCRLRSKSAGKHYHQKCKRKLFFVKNSMYL
LGAEAHDSRKLNLRLSRTCKKDLCARDMT back to topmRNA from alignment at CM002455.1:877664..878312- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna360 ID=rna360|Name=rna360|organism=Nannochloropsis gaditana|type=mRNA|length=649bp|location=Sequence derived from alignment at CM002455.1:877664..878312- (Nannochloropsis gaditana)
ATGAATTTGACTCGTTACACATTCTTCATAAGCGATATGATGCATGCTGC
GACGAAGTTGTTGGGTGGCAGGAAGCAAGGTGCGACGTTGCCTCAAGTTA
CGTGGAGGAAAAGGAATGTGAGAGTGTGACTCCATTCAAAGATGCCGATG
GAGACATAGATACCATGTACTTGTCAAAATAGCAGAATCAGGCGTTTTTA
AGAGTGCTCAGGGTACATCTTTGCATAGTGACGCTGACGCCAGGACTTAC
GGGAATCGTTCTTGGTTTTCTTAATAGACTTGAAATAGAAGGTCGCTTTA
ATCGCTCTATGCGAGAAAATATCCTTATATAACTGCGTTATGGCTTGTAT
TCACGCATGTAACTTTGCATCGATAGTAATTTATTGCCGTCTGCGTTCTA
AGTCTGCAGGCAAGCATTATCATCAAAAATGCAAACGGTGAACGAATAAT
AGGGATGAGAAAATGTGGGGAAGATAAAAAGTATGGACTTTGAAGTTTCA
TGCTACTTCCACTGGCCTCTTTAAGAAAGCTCTTTTTCGTGAAAAACTCA
ATGTACCTCTTGGGGGCTGAGGCCCACGACTCCAGAAAATTGAACCTAAG
ACTCTCACGGACTTGCAAAAAGGATTTGTGTGCTCGAGACATGACTTGA back to topCoding sequence (CDS) from alignment at CM002455.1:877664..878312- >rna360 ID=rna360|Name=rna360|organism=Nannochloropsis gaditana|type=CDS|length=1170bp|location=Sequence derived from alignment at CM002455.1:877664..878312- (Nannochloropsis gaditana)
AAAGCTCTTTTTCGTGAAAAACTCAATGTACCTCTTGGGGGCTGAGGCCC
ACGACTCCAGAAAATTGAACCTAAGACTCTCACGGACTTGCAAAAAGGAT
TTGTGTGCTCGAGACATGACTTGAAAGGTCGCTTTAATCGCTCTATGCGA
GAAAATATCCTTATATAACTGCGTTATGGCTTGTATTCACGCATGTAACT
TTGCATCGATAGTAATTTATTGCCGTCTGCGTTCTAAGTCTGCAGGCAAG
CATTATCATCAAAAATGCAAACGATGAATTTGACTCGTTACACATTCTTC
ATAAGCGATATGATGCATGCTGCGACGAAGTTGTTGGGTGGCAGGAAGCA
AGGTGCGACGTTGCCTCAAGTTACGTGGAGGAAAAGGAATAAAGCTCTTT
TTCGTGAAAAACTCAATGTACCTCTTGGGGGCTGAGGCCCACGACTCCAG
AAAATTGAACCTAAGACTCTCACGGACTTGCAAAAAGGATTTGTGTGCTC
GAGACATGACTTGAAAGGTCGCTTTAATCGCTCTATGCGAGAAAATATCC
TTATATAACTGCGTTATGGCTTGTATTCACGCATGTAACTTTGCATCGAT
AGTAATTTATTGCCGTCTGCGTTCTAAGTCTGCAGGCAAGCATTATCATC
AAAAATGCAAACGATGAATTTGACTCGTTACACATTCTTCATAAGCGATA
TGATGCATGCTGCGACGAAGTTGTTGGGTGGCAGGAAGCAAGGTGCGACG
TTGCCTCAAGTTACGTGGAGGAAAAGGAATAAAGCTCTTTTTCGTGAAAA
ACTCAATGTACCTCTTGGGGGCTGAGGCCCACGACTCCAGAAAATTGAAC
CTAAGACTCTCACGGACTTGCAAAAAGGATTTGTGTGCTCGAGACATGAC
TTGAAAGGTCGCTTTAATCGCTCTATGCGAGAAAATATCCTTATATAACT
GCGTTATGGCTTGTATTCACGCATGTAACTTTGCATCGATAGTAATTTAT
TGCCGTCTGCGTTCTAAGTCTGCAGGCAAGCATTATCATCAAAAATGCAA
ACGATGAATTTGACTCGTTACACATTCTTCATAAGCGATATGATGCATGC
TGCGACGAAGTTGTTGGGTGGCAGGAAGCAAGGTGCGACGTTGCCTCAAG
TTACGTGGAGGAAAAGGAAT back to top
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