EWM30296.1, cds360 (CDS) Nannochloropsis gaditana

Overview
NameEWM30296.1
Unique Namecds360
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:878196..878312 -
Alignment locationCM002455.1:877876..878024 -
Alignment locationCM002455.1:877664..877787 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30296.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100003g136.1813.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:878196..878312 -
CM002455.1supercontigCM002455.1:877876..878024 -
CM002455.1supercontigCM002455.1:877664..877787 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30296.1 vs. NCBI_GenBank
Match: gi|585112955|gb|EWM30296.1| (hypothetical protein Naga_100003g136 [Nannochloropsis gaditana])

HSP 1 Score: 267.314 bits (682), Expect = 1.162e-90
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 
Query:    1 MNLTRYTFFISDMMHAATKLLGGRKQGATLPQVTWRKRNKVALIALCEKISLYNCVMACIHACNFASIVIYCRLRSKSAGKHYHQKCKRKLFFVKNSMYLLGAEAHDSRKLNLRLSRTCKKDLCARDMT 129
            MNLTRYTFFISDMMHAATKLLGGRKQGATLPQVTWRKRNKVALIALCEKISLYNCVMACIHACNFASIVIYCRLRSKSAGKHYHQKCKRKLFFVKNSMYLLGAEAHDSRKLNLRLSRTCKKDLCARDMT
Sbjct:    1 MNLTRYTFFISDMMHAATKLLGGRKQGATLPQVTWRKRNKVALIALCEKISLYNCVMACIHACNFASIVIYCRLRSKSAGKHYHQKCKRKLFFVKNSMYLLGAEAHDSRKLNLRLSRTCKKDLCARDMT 129
The following BLAST results are available for this feature:
BLAST of EWM30296.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112955|gb|EWM30296.1|1.162e-90100.00hypothetical protein Naga_100003g136 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna360rna360Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications