rna3591, rna3591 (mRNA) Nannochloropsis gaditana

Overview
Namerna3591
Unique Namerna3591
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length612
Alignment locationCM002461.1:765179..765772 -

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Properties
Property NameValue
ProductMitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24
Orig transcript idgnl|cribi|Naga_100046g38.5147.mrna
Orig protein idgnl|cribi|Naga_100046g38.5147
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:765179..765772 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100046g38gene3458Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3591rna3591-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27108.1cds3582Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3591 ID=rna3591|Name=rna3591|organism=Nannochloropsis gaditana|type=mRNA|length=612bp
ATGATTGCCCGAAGGTTTTCCATACTCACTCGTTCTCTTGCGAGATCGTG
CAAGAGCATGACAAGTATATCGGTGACACAAGTATCGCAGGCCGTAGCAG
GGGCGGCTCGCCCCAGCAAGGCTCTATGGGGCGCTTATAGGAAGCCTCTG
AGCGAGTCGCAGCAGCAGGTCTGCCCCCGCTCTCCTTTCTACTGTGCCCA
GGCGACGCTTTTCTCCCATTTTGTGTCTTCTTCCTCCCGAACAAATGCTG
AAGAGGTACAAAATCAAGGTGGTTTTCCCACGGAGCGCGATTTTCACGTG
GTGGCGGATGAGACTCTGGACGAGGTTCAAGCTTCGGTGGATGCCTTGGA
GGACGTCGTGGAAGATTATGAGGCGAATCTATCGCAAGGAGTCCTCAACA
TTGGAATGGGCCCGCACGGGACCTGGGTGCTCAACAAACAAACTCCCAAC
CGCCAGATCTGGTGGTCTTCGCCCTTGAGTGGTCCTTTACGCTTTGAGTA
CGACGTTGCGACAAAGATGTGGGTGACAACGCGGGACAGGCGGGAGCTTT
TCGCGTTGCTGAGAGAAGAGGTCAAAAGGGTGGCGGGGATTGACATAAGG
ACTCGAACATAG
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protein sequence of rna3591

>rna3591-protein ID=rna3591-protein|Name=rna3591|organism=Nannochloropsis gaditana|type=polypeptide|length=140bp
MAVVPPINSVYSPSCDARLAEGCIRGLYVGALWGAFFHRYDTVPLPTKAS
RGQIMLRIFRTRAVGACKHSFLLATFLGLYSGSSCVAEKTMGRRNWATSF
VGGLSAGAFAGLTTGHPHHAMTWGVGTGLASMIVYGLQGG
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mRNA from alignment at CM002461.1:765179..765772-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3591 ID=rna3591|Name=rna3591|organism=Nannochloropsis gaditana|type=mRNA|length=594bp|location=Sequence derived from alignment at CM002461.1:765179..765772- (Nannochloropsis gaditana)
ATGGCGGTGGTCCCCCCAATAAATAGCGTGTATAGCCCTTCTTGTGACGC
ACGGCTCGCGGAAGGTAAGGTTTTCCGTCATTTTTTTTTAACTCTTCGCA
GCTCAGTTCTTCATCTCCCGTCCGCTGCAAGCAGGGTGCATTCGCGGGCT
TTACGTGGGGGCCCTGTGGGGGGCATTCTTTCACCGCTATGATACAGTTC
CATTACCGACGAAGGCCTCACGAGGACAGATTATGCTGCGAATATTTCGA
ACTCGGGCAGGTGCGTGAGAGGGAGGCTGGAGTGACATAGGTCGGAGATG
GAGCTTACGTGTCGTCAGTAAGATGGGTAGATTGACTGAGCTTATCCCCG
TCATCACACAGTGGGCGCATGTAAGCATTCATTCCTCCTCGCAACTTTCC
TGGGGTTGTACAGCGGATCCTCGTGCGTGGCTGAGAAAACCATGGGACGC
CGCAACTGGGCGACGAGTTTCGTCGGGGGCTTAAGCGCGGGAGCCTTCGC
AGGCCTCACGACAGGTCACCCCCATCATGCCATGACATGGGGCGTAGGAA
CTGGCCTAGCAAGCATGATTGTGTACGGGTTGCAAGGAGGTTGA
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Coding sequence (CDS) from alignment at CM002461.1:765179..765772-

>rna3591 ID=rna3591|Name=rna3591|organism=Nannochloropsis gaditana|type=CDS|length=1269bp|location=Sequence derived from alignment at CM002461.1:765179..765772- (Nannochloropsis gaditana)
TGGGCGCATGTAAGCATTCATTCCTCCTCGCAACTTTCCTGGGGTTGTAC
AGCGGATCCTCGTGCGTGGCTGAGAAAACCATGGGACGCCGCAACTGGGC
GACGAGTTTCGTCGGGGGCTTAAGCGCGGGAGCCTTCGCAGGCCTCACGA
CAGGTCACCCCCATCATGCCATGACATGGGGCGTAGGAACTGGCCTAGCA
AGCATGATTGTGTACGGGTTGCAAGGAGGTTGAGGTGCATTCGCGGGCTT
TACGTGGGGGCCCTGTGGGGGGCATTCTTTCACCGCTATGATACAGTTCC
ATTACCGACGAAGGCCTCACGAGGACAGATTATGCTGCGAATATTTCGAA
CTCGGGCAGATGGCGGTGGTCCCCCCAATAAATAGCGTGTATAGCCCTTC
TTGTGACGCACGGCTCGCGGAAGTGGGCGCATGTAAGCATTCATTCCTCC
TCGCAACTTTCCTGGGGTTGTACAGCGGATCCTCGTGCGTGGCTGAGAAA
ACCATGGGACGCCGCAACTGGGCGACGAGTTTCGTCGGGGGCTTAAGCGC
GGGAGCCTTCGCAGGCCTCACGACAGGTCACCCCCATCATGCCATGACAT
GGGGCGTAGGAACTGGCCTAGCAAGCATGATTGTGTACGGGTTGCAAGGA
GGTTGAGGTGCATTCGCGGGCTTTACGTGGGGGCCCTGTGGGGGGCATTC
TTTCACCGCTATGATACAGTTCCATTACCGACGAAGGCCTCACGAGGACA
GATTATGCTGCGAATATTTCGAACTCGGGCAGATGGCGGTGGTCCCCCCA
ATAAATAGCGTGTATAGCCCTTCTTGTGACGCACGGCTCGCGGAAGTGGG
CGCATGTAAGCATTCATTCCTCCTCGCAACTTTCCTGGGGTTGTACAGCG
GATCCTCGTGCGTGGCTGAGAAAACCATGGGACGCCGCAACTGGGCGACG
AGTTTCGTCGGGGGCTTAAGCGCGGGAGCCTTCGCAGGCCTCACGACAGG
TCACCCCCATCATGCCATGACATGGGGCGTAGGAACTGGCCTAGCAAGCA
TGATTGTGTACGGGTTGCAAGGAGGTTGAGGTGCATTCGCGGGCTTTACG
TGGGGGCCCTGTGGGGGGCATTCTTTCACCGCTATGATACAGTTCCATTA
CCGACGAAGGCCTCACGAGGACAGATTATGCTGCGAATATTTCGAACTCG
GGCAGATGGCGGTGGTCCCCCCAATAAATAGCGTGTATAGCCCTTCTTGT
GACGCACGGCTCGCGGAAG
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Synonyms
Publications