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Properties
| Property Name | Value |
|---|
| Product | LETM1-like protein |
| Orig transcript id | gnl|cribi|Naga_100046g30.5141.mrna |
| Orig protein id | gnl|cribi|Naga_100046g30.5141 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:749468..750643 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3584 ID=rna3584|Name=rna3584|organism=Nannochloropsis gaditana|type=mRNA|length=1502bp
TTTGTACCCTGGTTGCATTTCTTCGCCGACCCACACCCCTCAACGGAAGT
AATAAGTGTATGGCACCGATTGGACGCAAGACAACAAGAGGGACCACGAT
CCATGGAATATTTGCATCGTCCGCTCAATTATGTGGAAGAGCCCATGGGA
AAAGCGAGCTTCAAGCGCGAGCAGGAGGTCACTCCCAGGCACGGAGCATC
AAATAAACCACAAAGACACCAGACCAGAACGGTGTGACCCTGTTGTGGCG
TTTACTTTGTGTAGATTTCAGAGGTTCTCCTGAGCCCGACTTGGGGTTGA
GTACACAGCAAGCAAAGCAACGTCCAGCATCATCAATCAAGAGCACTAAA
TCCAACAGGAGCACGAAATAATTATGTCGTACGCCCAACGCGGCGGGGAA
GAGACCAAATATGAGCAGGAAATGGGGCCTCGGATGACTCCCCGCACGAC
CCCGCGGAACATGCCGCCCCCCAGTATGCACTCCTACGATCGCACCACGC
CACGTCACATGCCTCCACCGAGCATGCACTCGTTTAATGCCACGACCCCG
AAAAGTATGCCTCCGCAAAGCATGCATTCGTTCAGTGGCACGCCACGAAA
TATGCCGCCGGCGAGCATGCATTCGTACGACATGGATGATGTGATGGTGG
ATCCTTACACGGGCCTGGCGTACAAGCAGCCTCCGCGCACCACCTGCGAG
CGCCATCGAGGAAAGTTCATCTGTCTTGGTGTCACGCTGGGTTTACTTTT
GGTGCTTGGCATTTTGATTGCCATCTTCTTCCCTCGAGCGCCTCAGATCA
CATTGTTCAATTCAAGCGTGCTGGCCATCGATGGTTTCACTGGCGCCACC
GCCAGGTTTGTTTTTCAGATCCGGAACCGCAATTTATACCAAGTTTCATT
TCAGAACTTGGTGGCGGAGGTGTATGACACAAACGGCATTTTTCTGGGCA
CAATTTTGCGGCCCGGTCGCTTCCAAGTTTTCGGCCGTGCAACCGGTTTC
GTGACGGCCACAGGCGTCTTCCGCAGCGCCTTGCCCCAGCTTGCTAACGT
CGGCATGGACTGTATGCAAAACGGCATGATGACGCACCTTCAGCTCCGGA
CATCGGGAGATCTGCTTGTCCTTGGAACCACAAGGCGCGTCGTCTCCAGC
GCCACGGTGATGGTGAATTGCAACGTACAAAATATTAATAACAACGGCGG
GATGGGGGGCGGGAGAGTGGCGGGCGGCGGGGTCCAGAATGGATGGGGTA
ATGGGATGGGCAATAATGGCATGGGGAGGGCGGGGAATAATGGATGGTTG
TAAATCGTCTTCTTGTCATCAAATCCATCTTGCCACGATACGAGGAGAGG
AATTTAAAACAAAACAAAGTATTTTCATAGGACACAAAAGAGACAAGGTA
AAAAGATGACAGAATGATGTGAGATCGCGGCGCAGACGCAAATTGTCAGG
CTGCATGCATGAAAAGGACGAAAGAAAACAGTGGTGCAGAGCTTTAAATA
AG back to topprotein sequence of rna3584 >rna3584-protein ID=rna3584-protein|Name=rna3584|organism=Nannochloropsis gaditana|type=polypeptide|length=391bp
MKTPSFLFLAFVLLIAHVAASRLQGSTFTSIQTLTQFHDSSRQFILDGRQ
LAIPLPAHVLPPLAIVGGLVQGIGNSLRRLQEGTIDLWGNTKQLGGLKKR
FARGETLTFPEYNLMQKTSGDIAKFVGLALFTMSKPEFTPFLCSFFPAVV
PSTYLNSDEKLQRCQQRNFARVRGVVTHLMSLQQEAVAPHRKENDRMRHL
RTMERLLHTTTKAGPGKALKQVGDLEYVLFCRPKRDGKGRQKADLRAVPR
PFLVSVCNAIGMFHKFIPAAGLRTMLSDYLWKIDESDQVLLNTNVDKLGR
DDLLDACAQRALSLGDASPDAMRANLKSYLKCVSRPSLAPPVVRKKESEQ
EGKVVALNENNMRFALLGLNMVGLVRDAKENSALRALFGCT back to topmRNA from alignment at CM002461.1:749468..750643+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3584 ID=rna3584|Name=rna3584|organism=Nannochloropsis gaditana|type=mRNA|length=1176bp|location=Sequence derived from alignment at CM002461.1:749468..750643+ (Nannochloropsis gaditana)
ATGAAGACACCCAGCTTTTTGTTTTTGGCCTTCGTACTCCTCATTGCCCA
TGTTGCCGCCTCGCGCCTCCAAGGCTCAACATTCACTTCCATTCAAACAC
TGACACAATTTCACGACTCATCCCGTCAATTCATATTGGATGGACGCCAA
CTTGCCATTCCTTTGCCCGCACACGTTCTCCCGCCACTGGCTATCGTTGG
AGGGCTGGTCCAAGGCATTGGGAACTCGTTGAGGCGACTTCAAGAGGGTA
CGATAGACCTGTGGGGTAACACGAAGCAGCTAGGTGGGCTGAAGAAGCGC
TTTGCCCGCGGAGAGACGTTGACGTTTCCGGAATATAATTTGATGCAGAA
GACGAGCGGTGACATAGCGAAATTTGTCGGCCTGGCGCTTTTCACAATGA
GTAAACCGGAATttactcccttcctctgctcaTTCTTCCCCGCCGTTGTG
CCCTCCACGTATCTCAATTCCGACGAGAAGCTCCAACGTTGTCAGCAACG
AAACTTCGCGCGGGTCCGTGGCGTGGTAACGCACTTAATGAGTCTGCAgc
aagaggcggtggccccgcacaggaaggagaatgaTCGCATGCGGCACTTG
CGGACCATGGAGCGATTGCTGCACACCACCACCAAGGCGGGTCCGGGAAA
AGCGCTGAAGCAGGTGGGAGATCTTGAGTATGTGCTCTTCTGCCGCCCAA
AAAGGGATGGCAAGGGTCGGCAGAAGGCGGACTTGCGTGCTGTTCCTCGG
CCGTTCCTAGTTTCCGTTTGCAACGCGATAGGCATGTTTCACAAATTCAT
TCCAGCGGCGGGTCTCAGAACCATGCTCAGCGATTATCTCTGGAAGATTG
ACGAGAGCGACCAGGTGCTGCTTAACACAAACGTCGACAAGCTGGGAAGG
GACGATTTGCTCGACGCCTGTGCCCAGCGGGCCCTCTCTTTGGGCGACGC
CTCCCCTGACGCTATGCGAGCGAACCTTAAGTCGTATTTGAAGTGCGTAT
CCCGCCCAAGCCTGGCCCCACCAGTAgtaaggaaaaaggaaagcgagCAA
GAGGGGAAAGTGGTGGCGCTGAACGAGAATAATATGCGCTTTGCACTTTT
AGGTTTGAATATGGTGGGATTAGTGAGGGACGCAAAGGAAAATAGTGCCT
TGCGAGCTCTTTTTGGTTGTACTTGA back to topCoding sequence (CDS) from alignment at CM002461.1:749468..750643+ >rna3584 ID=rna3584|Name=rna3584|organism=Nannochloropsis gaditana|type=CDS|length=1176bp|location=Sequence derived from alignment at CM002461.1:749468..750643+ (Nannochloropsis gaditana)
ATGAAGACACCCAGCTTTTTGTTTTTGGCCTTCGTACTCCTCATTGCCCA
TGTTGCCGCCTCGCGCCTCCAAGGCTCAACATTCACTTCCATTCAAACAC
TGACACAATTTCACGACTCATCCCGTCAATTCATATTGGATGGACGCCAA
CTTGCCATTCCTTTGCCCGCACACGTTCTCCCGCCACTGGCTATCGTTGG
AGGGCTGGTCCAAGGCATTGGGAACTCGTTGAGGCGACTTCAAGAGGGTA
CGATAGACCTGTGGGGTAACACGAAGCAGCTAGGTGGGCTGAAGAAGCGC
TTTGCCCGCGGAGAGACGTTGACGTTTCCGGAATATAATTTGATGCAGAA
GACGAGCGGTGACATAGCGAAATTTGTCGGCCTGGCGCTTTTCACAATGA
GTAAACCGGAATttactcccttcctctgctcaTTCTTCCCCGCCGTTGTG
CCCTCCACGTATCTCAATTCCGACGAGAAGCTCCAACGTTGTCAGCAACG
AAACTTCGCGCGGGTCCGTGGCGTGGTAACGCACTTAATGAGTCTGCAgc
aagaggcggtggccccgcacaggaaggagaatgaTCGCATGCGGCACTTG
CGGACCATGGAGCGATTGCTGCACACCACCACCAAGGCGGGTCCGGGAAA
AGCGCTGAAGCAGGTGGGAGATCTTGAGTATGTGCTCTTCTGCCGCCCAA
AAAGGGATGGCAAGGGTCGGCAGAAGGCGGACTTGCGTGCTGTTCCTCGG
CCGTTCCTAGTTTCCGTTTGCAACGCGATAGGCATGTTTCACAAATTCAT
TCCAGCGGCGGGTCTCAGAACCATGCTCAGCGATTATCTCTGGAAGATTG
ACGAGAGCGACCAGGTGCTGCTTAACACAAACGTCGACAAGCTGGGAAGG
GACGATTTGCTCGACGCCTGTGCCCAGCGGGCCCTCTCTTTGGGCGACGC
CTCCCCTGACGCTATGCGAGCGAACCTTAAGTCGTATTTGAAGTGCGTAT
CCCGCCCAAGCCTGGCCCCACCAGTAgtaaggaaaaaggaaagcgagCAA
GAGGGGAAAGTGGTGGCGCTGAACGAGAATAATATGCGCTTTGCACTTTT
AGGTTTGAATATGGTGGGATTAGTGAGGGACGCAAAGGAAAATAGTGCCT
TGCGAGCTCTTTTTGGTTGTACTTGA back to top
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