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Properties
| Property Name | Value |
|---|
| Product | Ion transport |
| Orig transcript id | gnl|cribi|Naga_100046g18.5142.mrna |
| Orig protein id | gnl|cribi|Naga_100046g18.5142 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:729805..733568 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3572 ID=rna3572|Name=rna3572|organism=Nannochloropsis gaditana|type=mRNA|length=2470bp
AATGCGAGGGTACAGGACTTGCGGGGGTTCTAACGGCGCAGACGCAAGAT
GCGGGCAATAGCAAAGCTACAGGGTACAAGGATGAGTGCTATATTAGTTT
TACATGTTTGCTATCACACATAGGCCGGTCGTTCAAAACAGGATGCATTG
TGTGGTTATTTGCGGGCATCCAATCGCCAGGACCTGACCGTCAGACCTCA
AGAAAAAGAATCAAGCAAGATTACACAAGAGATTGGACCATCGTGCCCGT
TGGATGCGCTGCCCTGGCCCTTCCTTCAGACAAGCAGCGAAAGTGCAAGA
AAATAAACCATGGGAACAGAAAATATGAATTTCCCGCTGTCCTCGGACAA
TAGGTCGTGCCCGCCGTGGTCGATTCCAGTCCCAGACGCCCGCCGCCGAC
GCCCTGCTCCCGGTAGCTATCTTCCCAATCAACTCACATGGCATATACGC
TCTTTCAAAGTGGGAAGCCAGCGGTGTTGGCCGTGGACCAAAAGGAGTAT
TCAAAGGAAAAGTATTCTGACGGACGTGGCAGGCCAAAGCGTTGGGGGGG
AGATAACAGCTATTATGGGGGCCTCGGGCGCGGGGAAAACTACGTTGCTC
GAATGTCTGGCTTTGCGTTCCCGACAATTCAAGGGAAGGGTGACTTGGAA
TGGAGAGGCTGTCCGGGGAGACTACTTTACAGCCTCGGCGTTGGTTCACC
AGCGGGAGGTTCTCTGTGGGTTCCTGACAGTGGAGGAGCATCTCTTGTTC
CACGGGACGGCTCGAATGTCGGATAGGTTTAGCCCGAAAGAAATCGAGGC
AAGAGTTCGAAATGTTATAGAGGACGTGGGTTTAAGTAAGTGTCGGAAGA
CGCTGGTGGGAGGCCCGGGAGCGCCGCAGAACAAGAAGGGGCTGTCTGGG
GGGGAGCGGAAACGCCTGACGATCGCTACGGAGCTCTTGCTTTGCCCGCA
AGCGATCTTTCTTGACGAGCCAACGACCTCGCTTGACTCTGTGATGGCGG
GGCACGTGGTGGCCCTTCTCCGTCAGCTGGCGCTCTCCCGGCGGATCCTG
GTAATGGCGACGATCCACGCCCCCTCCTCCCAGATCTTCAGCCTCTTCTC
GCACGTCTTGCTCCTGACCAACGACGGCCGCCTCGCTTTCCATGGGACGA
TCTCAAATGCTCTGCTTTATGCCAGCAGCTGTCTGAAGCGGCCCTTGCCC
GACGCCTACAATCCTGCCGACCATCTGGTGCGGCTGGTCGTCTCGAAGCC
GGGGGGAGGGGCCTCGGCGAGGGAGGAGCGGAGGAAAGAGAACGACTGGC
TCGTCCAGTCGTTCGCGGCATCGGCTTACGGGGACCCTGAGCTGCCAGAG
CGCGGGAGTCATCGAGACAAAGCCTGTGAGGAGAACAGCCATCGGAGTTT
GCGGGGGGTCCAGGGACAGCACGCCTCGGCGTGGACCCTCTTCCGCCTCA
ACCTCCGGCGCGGCCTCCTGCAGACGTCCAGGAACAGCCTGAGCTTCTGG
CTGTACGGGATGGTCATGGGCGTGATAGGGCTTTGTTTCGGCACCCTCTA
CTTCCAGCAGGCCGCCTCCAGCTGGCGCAACCTGGTCGGCCTCCTCTACG
CCCTGGTCGTTGCCTTGCTCTACATGTGCCCCCTCACCGTCATCCTCCGC
GCGCCTCTGGACTGGCCCCTTCTGCTCCGGGAATACTTCGCGGGCGCCAA
CGCCGCAGGCCCATACCTGCTGGCCAAGATCCTCTACGAGCTCCCCTTCG
CGTACGGACCGCTCCTCCTCGTCGCCTTCCTCTACTGGATGACGGGCCTC
ACGCCCTCCCTCGCGGCCTTCCTCCAATTCGCAGGCGTGGTGGCCCTGAC
GACCCAGGCCTCCTGCGCCATGGCCCTCATGGTCGGCTCCCTCTCGGCGA
ATCCGATGCTCACACTCGGCATCCTCCCCGCCTTCATCACCCCCATGGTG
CTCTTCTCCGGCTTCCTCTACGACACCGCCACTCTCCCTTCCTACCTGGC
TTGGCTTCCGAAGATCTCCATCGTCAATTACGGATTTGCGGCCCTGATAA
CGCTGCAGCAATCCCTGCTTCCCGCGGAGTTGCGAGGAGTGGCGTTGAAG
TTCGTGAATGTGGACCCCGAGGCCTTGGGAGCTAACTTGTTAATGCTTAC
GGGGATGACGGTGATATTTTACGCCCTCACTTACATGTTCTTGACGCTGC
GGCTACGAACGGCTATGCGCGCCTGAGCTTAGAGGGTAGGCTGGTGCCGG
TGGGATGCTGTGCAGACAATGGCATGGAAATCCTCGGGAAGCCGTCGTGG
TAGGCTGGGGGCGAAGGATGTACATGAGGCGGCTCATTGATGAGGGAAGC
GACGGCGGCTTACAGGGTGGAGGGATGGGACAAGAATAGAAATAAGGGAA
AGTAATTGCATAACCCGGTCTCCGACTCATTAACTGGAATGCAGCGGGGG
CTGTTACCATCCACCGCCGA back to topprotein sequence of rna3572 >rna3572-protein ID=rna3572-protein|Name=rna3572|organism=Nannochloropsis gaditana|type=polypeptide|length=578bp
MNYHDDTATPPDTYKPTLTVSDAHRTEEKQSRKIVREAKQVLSYSDSTFS
DQLNALRVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTL
RHPTTCADPVCEPGPTTFCTEVVCRPRENRIIWHLELWTIVIFTIDYLLR
VFCVPAVPVDLVFPRSLEYTIDGRLKDRSNYYRMDPCKKTTKYMLSGLNI
IDVISIVPFYVYLLAPYPAIRVFRFLRFLLIFKLGRRFREAGAIISRTLR
ASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEFPAGGFLRPNDRN
TALEQSPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLL
SLALPITIIGQNFSQQYNLVYADPDMQPHLFYPSTPHTPRTPKGGPSQTP
GRKGLAPGTRDGFRSKMGGEKQDIDYVPPEQEIEALRAHFQQQIDALRLH
VQGSTAASAAPAQQEVDALRSYVQREIGSLKMSLNDVQGRTPRASEESDT
TASRAFSPSNDGRNMDMSRSSNAGAQRRREQEEEEDREHAAQQSLRDAEI
NRFRNQITEGIRRFSPQAELESLRGGLY back to topmRNA from alignment at CM002461.1:729805..733568- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3572 ID=rna3572|Name=rna3572|organism=Nannochloropsis gaditana|type=mRNA|length=3764bp|location=Sequence derived from alignment at CM002461.1:729805..733568- (Nannochloropsis gaditana)
CGTAGACGTACCATGCTGGCGTGTATAATTTGAGTAGTTGATGGACGTTG
GTTGTGCGGTGCTTCCTCCGGTGCCCCAAGGGTCTCCCCAAGACGGCCAG
GTCCAACCGACGTCTTGGGGTGAGGTTTGCGATGACTGAAAAGGAGCCCC
ACGAATATTAGACGTGCTTGTGCCAGTACTTGGAGCACTCTCAGCTGGTG
CCCCTGGAAAGGGAGCGTCAGGGATGGCCAAAGAGGTTCCTATCAAGTAA
AGAACAACGAGGCAGAGGCAAGCACGACCTGAAGGTGGGCCGTGCATGAT
GCTGCATGTGGGAGGGCAAAAATGGGTATGACTTAAACTCGCAATAGGAT
AGGTACATGGCTGTAAAATTGAGCATCACATGTGCAACATACGCTCATAC
TTAAAAGTATACCCGAAAGATTTCCTCGCGGAGATGGTTGCAAGTGGGTT
TATGGCCAAATTTTCGGGCAACAGAACAGAAAAGAAACCAAAAAAACGCC
GGCGCAAACCGAGCCTCCAAAAAGGATGTCCACCATCGCCTTTTTTGCAT
AGTGGTTGTACAAAAGGTTTTGTAACACCTCACAACATGTTTTTACGTGG
CTTCACAGAATGTTGGATCATGGGCGGGTGATGAAAAGTGCAAATACTGT
CTGTTGTAGATCATCGACCTCCTGCTCGAGGCTCGTGTGGCCCGGGGCAG
GGCGAAGATACTTTTTACGAGGTCACTTAGCGCCATAAACCAAACACATA
CGAGCGTACTCGACGTATGAGGTTGAGGAGGTGCGCATGCACGTTCCAAA
CCATCTCACTGGGCACGAATCGTGCTGTGCCGGGCCTGCAATCACCGGGG
CAGGGAGTGAAAGGAAGAGCATCCAGGTCATCGCCTTTCCCTCTCTTGCA
TGCGCGCCACGAGCGAGTACGCAAGCTTTTCCATTGTTCAACAAGCACGT
TTATGCCACTCAAACATTCGCCTGCCATGGGGACACTTATGCCCGGGTAT
ACTGTATTAGAGGTCGCCTCACTTTTTGTCAGAATTTTAAGGTCGATGAC
AGCGCCTTATAAGGAGGGCCACGGCCATTTCGATGGTTGAGTTGTCAAAG
CAGGCCAACGAGCTTTATCAGTGACGCTCAGCAAAAGCTTACTACAGGTC
ATGCCACACTGCATGATCTTTCACCTATCCGTTTACTTACGTGACAAGCA
AATTTCATGACATATTTCTAGGCATCGGTGGCCTTTCCTGTAGAGACTTT
CATTTCGTGCCTTTCCCGTGGTTGAAGCCGGCTCGTCAACATGAATTATC
ACGACGACACGGCGACCCCACCGGATACATACAAGCCCACATTGACGGTG
TCCGATGCCCATCGTACTGAAGAAAAGCAATCTCGAAAGATTGTCCGCGA
AGCGAAGCAAGTGTTGTCATACTCTGATAGCACCTTCTCGGACCAGTTGA
ACGCCTTACGGGTCTTGATCTTCGTCACTTTGGAGCACCCCCGCTCCAGC
CGGCTGGCCTGGTACATTTCTATCTTTTTGGTCGCCTGCATCCTTCTTAA
TGCCATCTCTTTCATGGTCGGCACAATTCCCTCAACGCTGCGGCACCCTA
CGACGTGCGCCGATCCCGTCTGTGAGCCGGGCCCCACCACCTTTTGCACA
GAGGTGGTTTGCCGTCCGCGGGAGAATCGTATCATTTGGCATTTGGAGCT
CTGGACCATCGTCATATTCACGATCGACTATCTGCTTCGTGTCTTTTGCG
TCCCTGCGGTCCCCGTGGACCTGGTCTTCCCCCGGTCTCTTGAGTACACG
ATCGACGGGCGCCTGAAGGACCGCTCCAACTACTACCGGATGGACCCCTG
CAAGAAGACAACCAAGTACATGCTCTCGGGCCTGAACATCATCGACGTCA
TCTCCATCGTCCCCTTCTACGTCTACCTCCTCGCCCCCTACCCCGCCATT
CGCGTCTTTCGCTTCCTCCGCTTCCTTCTCATCTTCAAGCTCGGCCGGCG
ATTCCGGGAAGCGGGCGCCATCATCTCCCGCACCCTCCGCGCCTCTCTGC
CCGCCCTCCTCATCTTCGTCTTTCTGACCACGGTCCTGGCCATCGTCTTC
GGTTCCATGATGTTCTACTTTGAGGGAGGTATCTATTCGGTAACGATGGA
ATTTCCCGCCGGGGGCTTCCTCCGGCCCAATGACCGTAACACCGCTCTGG
AGCAATCGCCCTTCCAGTCGATTTTCACAGGGGTCTACTGGTACGTCGTC
AACACCACCACGCTAGGGAATGCCAACCTATACCCGACCACCACAGGCGG
GCGCATTGCCTCCTGCTTCATCGCCTACTGCGGTCTCCTCTCCCTGGCCC
TGCCCATCACCATCATCGGCCAGAACTTTTCCCAGCAGTACAACCTCGTC
TACGCCGACCCCGACATGCAGCCCCACCTCTTCTACCCCTCGACACCCCA
CACACCCCGCACGCCCAAGGGCGGGCCCTCCCAGACCCCCGGGCGCAAGG
GCCTGGCGCCCGGCACGCGGGACGGCTTCCGCAGCAAGATGGGCGGGGAG
AAGCAGGACATCGACTACGTGCCTCCGGAGCAGGAGATCGAGGCCCTGCG
CGCGCACTTCCAGCAGCAGATCGACGCCCTTCGCCTGCATGTCCAGGGCT
CCACCGCGGCCTCGGCGGCGCCCGCCCAGCAGGAAGTCGACGCTTTGCGG
TCCTACGTGCAGCGGGAGATCGGCTCCTTGAAAATGAGCCTAAACGACGT
CCAGGGCAGGACCCCTCGAGCGTCGGAAGAGAGCGATACGACCGCCTCGC
GTGCATTCTCTCCTTCCAATGACGGCCGCAACATGGACATGAGCCGGAGC
AGCAACGCGGGGGCGCAGCGACGGCGGGAGCAGGAGGAAGAAGAGGACAG
GGAGCACGCAGCCCAACAGTCTCTCAGGGACGCCGAGATCAACCGTTTCC
GCAATCAGATCACGGAGGGGATCCGGCGTTTTAGCCCTCAGGCGGAGCTG
GAGTCGCTCCGAGGGGGGCTTTACTAGGCCCGGTGGCGGAGGACTCGATG
CGCTGCGGGGTCGCCAGTGGAGGGGAAGAAGGAGGGGCGGGAGGGGGAGA
GAGGCGTATGGAGCGCTACCTTGAGAACGAGGTTTGAGAAGGGAGAAGAT
GCGATGTAAGAAGAGTGAGGAGGCGAATCGACGAGAAAAATGAGCGTGCG
GGAAGGCGTTCGGCTCAAGAGGAGGAGTCCCTCGGGATCATTTGTCTGCT
GACACTCACGTCGATTCCCGTGAGTCTCGCATTGAGGTTGCTCTCAAAGG
GTCATGCCAAGTTGGTGTGGCGCTATTCGTCGAGTGAGACATAGAGAAAA
GGACAATGATTTGGCATTTAGCTTTGCATTTAGATTGAACTTACCAGAGG
TATATTTATAAACTTCAATTATGTCTTTCGCGCACGTGTAGCGAAAGGAA
GAGACCAATAGAATTGTAATCAATGGGCTTACGCGATGGCATATATACTG
TGAGAGGAGGCCGCGCGTGTGGAGAGTTCTTTTCAAGGAGAGGGGGAAAA
GGTTGGCGTGCGAACACACTCGATGTAAAAGAAAAAGAGCGAGGGAAGGA
GGAGGAGAGTAGTCGATGTAACAAAGTGCGTTAAGATGAGGCGGTTTGCT
AGTCCGCCTGAGCGCCTGAGGGAGAGATTGGAGGAAGTGCCTCATGAGAG
AGCTAGGAATGACGAGATGGCTCCAGAAAAGAAAAGAAGCAAACAGATAA
TGCGTGCCGGCTGA back to topCoding sequence (CDS) from alignment at CM002461.1:729805..733568- >rna3572 ID=rna3572|Name=rna3572|organism=Nannochloropsis gaditana|type=CDS|length=1737bp|location=Sequence derived from alignment at CM002461.1:729805..733568- (Nannochloropsis gaditana)
ATGAATTATCACGACGACACGGCGACCCCACCGGATACATACAAGCCCAC
ATTGACGGTGTCCGATGCCCATCGTACTGAAGAAAAGCAATCTCGAAAGA
TTGTCCGCGAAGCGAAGCAAGTGTTGTCATACTCTGATAGCACCTTCTCG
GACCAGTTGAACGCCTTACGGGTCTTGATCTTCGTCACTTTGGAGCACCC
CCGCTCCAGCCGGCTGGCCTGGTACATTTCTATCTTTTTGGTCGCCTGCA
TCCTTCTTAATGCCATCTCTTTCATGGTCGGCACAATTCCCTCAACGCTG
CGGCACCCTACGACGTGCGCCGATCCCGTCTGTGAGCCGGGCCCCACCAC
CTTTTGCACAGAGGTGGTTTGCCGTCCGCGGGAGAATCGTATCATTTGGC
ATTTGGAGCTCTGGACCATCGTCATATTCACGATCGACTATCTGCTTCGT
GTCTTTTGCGTCCCTGCGGTCCCCGTGGACCTGGTCTTCCCCCGGTCTCT
TGAGTACACGATCGACGGGCGCCTGAAGGACCGCTCCAACTACTACCGGA
TGGACCCCTGCAAGAAGACAACCAAGTACATGCTCTCGGGCCTGAACATC
ATCGACGTCATCTCCATCGTCCCCTTCTACGTCTACCTCCTCGCCCCCTA
CCCCGCCATTCGCGTCTTTCGCTTCCTCCGCTTCCTTCTCATCTTCAAGC
TCGGCCGGCGATTCCGGGAAGCGGGCGCCATCATCTCCCGCACCCTCCGC
GCCTCTCTGCCCGCCCTCCTCATCTTCGTCTTTCTGACCACGGTCCTGGC
CATCGTCTTCGGTTCCATGATGTTCTACTTTGAGGGAGGTATCTATTCGG
TAACGATGGAATTTCCCGCCGGGGGCTTCCTCCGGCCCAATGACCGTAAC
ACCGCTCTGGAGCAATCGCCCTTCCAGTCGATTTTCACAGGGGTCTACTG
GTACGTCGTCAACACCACCACGCTAGGGAATGCCAACCTATACCCGACCA
CCACAGGCGGGCGCATTGCCTCCTGCTTCATCGCCTACTGCGGTCTCCTC
TCCCTGGCCCTGCCCATCACCATCATCGGCCAGAACTTTTCCCAGCAGTA
CAACCTCGTCTACGCCGACCCCGACATGCAGCCCCACCTCTTCTACCCCT
CGACACCCCACACACCCCGCACGCCCAAGGGCGGGCCCTCCCAGACCCCC
GGGCGCAAGGGCCTGGCGCCCGGCACGCGGGACGGCTTCCGCAGCAAGAT
GGGCGGGGAGAAGCAGGACATCGACTACGTGCCTCCGGAGCAGGAGATCG
AGGCCCTGCGCGCGCACTTCCAGCAGCAGATCGACGCCCTTCGCCTGCAT
GTCCAGGGCTCCACCGCGGCCTCGGCGGCGCCCGCCCAGCAGGAAGTCGA
CGCTTTGCGGTCCTACGTGCAGCGGGAGATCGGCTCCTTGAAAATGAGCC
TAAACGACGTCCAGGGCAGGACCCCTCGAGCGTCGGAAGAGAGCGATACG
ACCGCCTCGCGTGCATTCTCTCCTTCCAATGACGGCCGCAACATGGACAT
GAGCCGGAGCAGCAACGCGGGGGCGCAGCGACGGCGGGAGCAGGAGGAAG
AAGAGGACAGGGAGCACGCAGCCCAACAGTCTCTCAGGGACGCCGAGATC
AACCGTTTCCGCAATCAGATCACGGAGGGGATCCGGCGTTTTAGCCCTCA
GGCGGAGCTGGAGTCGCTCCGAGGGGGGCTTTACTAG back to top
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