EWM27103.1, cds3563 (CDS) Nannochloropsis gaditana

Overview
NameEWM27103.1
Unique Namecds3563
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:730542..732278 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27103.1
ProductIon transport
Orig transcript idgnl|cribi|Naga_100046g18.5142.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:730542..732278 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
GO:0008076voltage-gated potassium channel complex
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006811ion transport
GO:0055085transmembrane transport
GO:0006813potassium ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0005249voltage-gated potassium channel activity
GO:0005216ion channel activity
Vocabulary: INTERPRO
TermDefinition
IPR028325VG_K_chnl
IPR005821Ion_trans_dom
IPR003091K_chnl
Homology
BLAST of EWM27103.1 vs. NCBI_GenBank
Match: gi|585109280|gb|EWM27103.1| (Ion transport [Nannochloropsis gaditana])

HSP 1 Score: 1196.8 bits (3095), Expect = 0.000e+0
Identity = 578/578 (100.00%), Postives = 578/578 (100.00%), Query Frame = 0
Query:    1 MNYHDDTATPPDTYKPTLTVSDAHRTEEKQSRKIVREAKQVLSYSDSTFSDQLNALRVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTLRHPTTCADPVCEPGPTTFCTEVVCRPRENRIIWHLELWTIVIFTIDYLLRVFCVPAVPVDLVFPRSLEYTIDGRLKDRSNYYRMDPCKKTTKYMLSGLNIIDVISIVPFYVYLLAPYPAIRVFRFLRFLLIFKLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEFPAGGFLRPNDRNTALEQSPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQYNLVYADPDMQPHLFYPSTPHTPRTPKGGPSQTPGRKGLAPGTRDGFRSKMGGEKQDIDYVPPEQEIEALRAHFQQQIDALRLHVQGSTAASAAPAQQEVDALRSYVQREIGSLKMSLNDVQGRTPRASEESDTTASRAFSPSNDGRNMDMSRSSNAGAQRRREQEEEEDREHAAQQSLRDAEINRFRNQITEGIRRFSPQAELESLRGGLY 578
            MNYHDDTATPPDTYKPTLTVSDAHRTEEKQSRKIVREAKQVLSYSDSTFSDQLNALRVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTLRHPTTCADPVCEPGPTTFCTEVVCRPRENRIIWHLELWTIVIFTIDYLLRVFCVPAVPVDLVFPRSLEYTIDGRLKDRSNYYRMDPCKKTTKYMLSGLNIIDVISIVPFYVYLLAPYPAIRVFRFLRFLLIFKLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEFPAGGFLRPNDRNTALEQSPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQYNLVYADPDMQPHLFYPSTPHTPRTPKGGPSQTPGRKGLAPGTRDGFRSKMGGEKQDIDYVPPEQEIEALRAHFQQQIDALRLHVQGSTAASAAPAQQEVDALRSYVQREIGSLKMSLNDVQGRTPRASEESDTTASRAFSPSNDGRNMDMSRSSNAGAQRRREQEEEEDREHAAQQSLRDAEINRFRNQITEGIRRFSPQAELESLRGGLY
Sbjct:    1 MNYHDDTATPPDTYKPTLTVSDAHRTEEKQSRKIVREAKQVLSYSDSTFSDQLNALRVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTLRHPTTCADPVCEPGPTTFCTEVVCRPRENRIIWHLELWTIVIFTIDYLLRVFCVPAVPVDLVFPRSLEYTIDGRLKDRSNYYRMDPCKKTTKYMLSGLNIIDVISIVPFYVYLLAPYPAIRVFRFLRFLLIFKLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEFPAGGFLRPNDRNTALEQSPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQYNLVYADPDMQPHLFYPSTPHTPRTPKGGPSQTPGRKGLAPGTRDGFRSKMGGEKQDIDYVPPEQEIEALRAHFQQQIDALRLHVQGSTAASAAPAQQEVDALRSYVQREIGSLKMSLNDVQGRTPRASEESDTTASRAFSPSNDGRNMDMSRSSNAGAQRRREQEEEEDREHAAQQSLRDAEINRFRNQITEGIRRFSPQAELESLRGGLY 578          
BLAST of EWM27103.1 vs. NCBI_GenBank
Match: gi|585110762|gb|EWM28384.1| (expulsion defective family member (exp-2) [Nannochloropsis gaditana])

HSP 1 Score: 183.341 bits (464), Expect = 2.976e-48
Identity = 106/322 (32.92%), Postives = 170/322 (52.80%), Query Frame = 0
Query:   54 NALRVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTLRHPTTCADPVCEPG-PTTFCTEVVCRPRENRIIWHLELWTIVIFTIDYLLRVFCVPAVPVDLVFPRSLEYTIDGRL--KDRS-NYYRMDPCKKTTKYMLSGLNIIDVISIVPF---YVYLLAPYPAIRVFRFLRFLLIFKLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEFPAGGFLRPNDRNTALEQSPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQYN 368
            +  R ++F+T +H   S  AW     +     ++ I+F++ T+P     P+ C+ P+C P  P   C  V+C PR +  +   EL T+++F  DYL+R+  V AVP  L++        DGR   +D S    +  P +KT +Y +    +ID++ I+P+   YV         R+ R  R L + KL R F + G ++  TL+ S P+L++    T VL  + G++ FY+EGGI+ VT   P G F R        E SPF S+    YW ++  TT+G  +L+PT+  GR  +   AYCG++ L+LPI I+ + F+  Y+
Sbjct:   27 HTWRTMVFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIY-------WDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITRVLRVLKLSRYF-DGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFR-RALEGGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYD 339          
BLAST of EWM27103.1 vs. NCBI_GenBank
Match: gi|585110761|gb|EWM28383.1| (expulsion defective family member (exp-2) [Nannochloropsis gaditana] >gi|585110763|gb|EWM28385.1| expulsion defective family member (exp-2) [Nannochloropsis gaditana])

HSP 1 Score: 179.489 bits (454), Expect = 1.895e-47
Identity = 106/322 (32.92%), Postives = 170/322 (52.80%), Query Frame = 0
Query:   54 NALRVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTLRHPTTCADPVCEPG-PTTFCTEVVCRPRENRIIWHLELWTIVIFTIDYLLRVFCVPAVPVDLVFPRSLEYTIDGRL--KDRS-NYYRMDPCKKTTKYMLSGLNIIDVISIVPF---YVYLLAPYPAIRVFRFLRFLLIFKLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEFPAGGFLRPNDRNTALEQSPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQYN 368
            +  R ++F+T +H   S  AW     +     ++ I+F++ T+P     P+ C+ P+C P  P   C  V+C PR +  +   EL T+++F  DYL+R+  V AVP  L++        DGR   +D S    +  P +KT +Y +    +ID++ I+P+   YV         R+ R  R L + KL R F + G ++  TL+ S P+L++    T VL  + G++ FY+EGGI+ VT   P G F R        E SPF S+    YW ++  TT+G  +L+PT+  GR  +   AYCG++ L+LPI I+ + F+  Y+
Sbjct:   27 HTWRTMVFMTADHMYYSYYAWLYGTVMCTVTGISCIAFVLSTMPRFNYTPSQCSRPICRPSDPGAECDRVICYPRPHHYLIQTELVTLILFIFDYLVRLITVHAVPQRLIY-------WDGRRINEDHSRGVAQPSPLEKTFRYAVHADQVIDLLVILPYLLNYVISTMNIMHWRLLRITRVLRVLKLSRYF-DGGELVWNTLKNSGPSLMLLTLFTIVLTFIMGALAFYYEGGIFKVTAAHPEGAFFR-RALEGGEEVSPFTSVPVSAYWVIITATTVGYGDLHPTSGPGRFVAAASAYCGIVFLSLPIAIVVKQFNIAYD 339          
BLAST of EWM27103.1 vs. NCBI_GenBank
Match: gi|551655720|ref|XP_005830634.1| (hypothetical protein GUITHDRAFT_110453 [Guillardia theta CCMP2712] >gi|428174760|gb|EKX43654.1| hypothetical protein GUITHDRAFT_110453 [Guillardia theta CCMP2712])

HSP 1 Score: 141.739 bits (356), Expect = 1.528e-32
Identity = 112/383 (29.24%), Postives = 180/383 (47.00%), Query Frame = 0
Query:   21 SDAHRTEEKQSRKIVREAKQVLSYS-DSTFSDQLNALRVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTLRHPTTCADPVCEPGPTTFCTEVVCRPRENRIIWH-LELWTIVIFTIDYLLRVFCVPAVPVD-LVFPRSLEY----TIDGRLKDRSNYYR---MDPCKKTTKYMLSGLNIIDVISIVPFYVYLLA------PYPAIRVFRFLRFLLIFKLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEFPAGG--------FLRPNDRNTAL------------EQSPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQY 367
            S A R+E ++ RK +R+    +S S D++  D+L+     ++ TLEHP SSRLA    I L+  I+++  SF+  TIPS                       + C   +   +WH +++  I IFTIDY+LRV   P + V+ L  PR   Y    T +G     S   +   +        ++L   N+ID++SI+PFY+ LLA          I++ R  R L I K    +     +++RT+R S+  L + +F  ++   +F S M++ E G++        GG        +  P+    A              +S F SIF   YW +   TT G  ++YP++ GG++   FI + G + LALPIT+I   F++ Y
Sbjct:    9 SKASRSEAEE-RKGLRKTSSYISVSPDASILDRLSGH---VWNTLEHPSSSRLASVWMIVLIVTIIISCTSFIAETIPS-----------------------LCCGSTDG--VWHQIDIVCIAIFTIDYVLRVITCPDIYVEYLPAPRLFGYNKAVTPEGDQVSDSTVNKPVWLTKLLARVSFVLRIANMIDLLSILPFYIRLLAGSRRSGAIQVIKIGRVFRLLRIIK----YSSGSELLARTIRTSIEPLGMLIFFVSIAVTLFSSAMYFAERGVWCDEFNNMCGGSAEDGKGWYAIPHTYKGATFSDGCQGHSWCRAKSQFSSIFISGYWCLTTVTTTGYGDMYPSSVGGKVLGFFIMFSGPIILALPITVISTTFAEAY 358          
BLAST of EWM27103.1 vs. NCBI_GenBank
Match: gi|585105815|gb|EWM24405.1| (potassium voltage-gated channel subfamily d member 2 [Nannochloropsis gaditana])

HSP 1 Score: 135.576 bits (340), Expect = 6.454e-32
Identity = 80/243 (32.92%), Postives = 135/243 (55.56%), Query Frame = 0
Query:   38 AKQVLSYSDSTFSDQLNALRVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTLRHPTTCADPVCEPGPTTFCTEVVCRPRENRIIWHLELWTIVIFTIDYLLRVFCVPAVPVDLVFPRSLEYTIDG--RLKDRSNYYRMDPCKKTTKYMLSGLNIIDVISIVPFYVYLLAPYPA-----IRVFRFLRFLLIFKLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSM 273
            ++++++  D  + +  + LR L+F+TL HP  S LA  +S  +   I +  + F++ T+P   R P  C DPVC PGP + C E +C P +   ++ +E  T+ IFTIDY+LR+ CV AVP  L+ P+   + + G   L++ S         KT  + +  +NIID++S +PFY+ L   +       +R+ R +R + IF+LG R+ +   ++  TLRAS  A+ +  F   VL + F ++
Sbjct:   43 SRRIITRKDDNYGE--SNLRRLVFLTLHHPNFSPLARLLSALMGLTIFITCLGFVLSTMPRFQRQPGHCPDPVCLPGPDSACPESICPPTQIPALFWVEAVTVGIFTIDYVLRLACVHAVPERLINPQHYLHQVGGPRALQEPSGL------TKTLSFTIQWMNIIDLLSFLPFYLGLKLDFGEENFVFLRLLRVMRVIRIFRLG-RYTDGSTVVRETLRASSAAVGLMAFFMIVLTLFFAAI 276          
BLAST of EWM27103.1 vs. NCBI_GenBank
Match: gi|1004145973|gb|KXZ53950.1| (hypothetical protein GPECTOR_6g868 [Gonium pectorale])

HSP 1 Score: 136.346 bits (342), Expect = 7.172e-30
Identity = 90/326 (27.61%), Postives = 151/326 (46.32%), Query Frame = 0
Query:   53 LNALRVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTLRHPTTCADPVCEPGPTTFCTEVVCRPRENRIIWHLELWTIVIFTIDYLLRVFCVPAVPVDLVFPRSLEYTIDGRLKDRSNYYRMDPCKKTTKYMLSGLNIIDVISIVPFYVYL------LAPYPAIRVFRFLRFLLIFKLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEFPAGGFLRPNDRNTALEQ----SPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQYN 368
            L+  RVL++  +    SSR A+ +SI ++  ILL+ I F + T+P+                   F  E    P  +R    +E  T+ IF  DYLLR+                                   C +   ++L+ LNIID++S VP+Y+ L      +      R+ R LR   + KLG R+R+   +++R L  S   L +  F  ++  +V  ++ ++ E G    T++   G ++R +++ T        SPF+SI  G +W +V   T+G  ++ P + GGRI +     CG+LS+ALP+ +IG NFS ++ 
Sbjct:  162 LSHYRVLLWRLMTDADSSRAAYGVSILVLLTILLSTICFCLETVPA-------------------FSEER--SPSSHRAFGVVETVTVQIFAADYLLRLLS---------------------------------CPRLLPFLLAPLNIIDLVSFVPWYIELAMQDSGMQGTAVFRIMRLLRVFRVLKLGGRYRKL-LVVTRALARSADMLALMAFFVSLTVVVAATLQYFAERG----TLDPSLGYYIRDHEKYTNSNGDPIVSPFESIPAGFWWAIVTVMTVGYGDVVPISAGGRIIAAATMLCGILSIALPVAVIGNNFSSEWE 428          
BLAST of EWM27103.1 vs. NCBI_GenBank
Match: gi|159464797|ref|XP_001690628.1| (hypothetical protein CHLREDRAFT_144354 [Chlamydomonas reinhardtii] >gi|158280128|gb|EDP05887.1| predicted protein, partial [Chlamydomonas reinhardtii])

HSP 1 Score: 134.035 bits (336), Expect = 2.498e-29
Identity = 87/322 (27.02%), Postives = 150/322 (46.58%), Query Frame = 0
Query:   57 RVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTLRHPTTCADPVCEPGPTTFCTEVVCRPRENRIIWHLELWTIVIFTIDYLLRVFCVPAVPVDLVFPRSLEYTIDGRLKDRSNYYRMDPCKKTTKYMLSGLNIIDVISIVPFYV------YLLAPYPAIRVFRFLRFLLIFKLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEFPAGGFLRPNDRNTALEQ----SPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQYN 368
            R  +++ +    SS  A+ +S+ ++  ILL+ ++F + T+P+        AD        TF                +E  T+ IF  DYLLR+   P V                                  +++++ LNIID++SIVP+Y+        L      RV R LR   + KLG R+R+   I++     SL  LL+  F   ++ +V  +++F+ E G Y   +    G ++R +++ T  +     SPF+SI +G +W +V   T+G  ++ P + GGR  +C    CGLL++ALP+ +IG NF+ ++ 
Sbjct:   86 RQALWLLMTESDSSNAAYAVSMLVMGAILLSTVAFCLETVPAYSEDRNRAAD-------QTFMI--------------IETVTVQIFAADYLLRLISSPNV---------------------------------WQFIIAPLNIIDLVSIVPWYIEKGLSGSALQGTAVFRVLRLLRVFRVLKLGARYRKL-LIVTTAFAKSLDMLLLMSFFVGLIVVVAATLLFFAERGDYDEAL----GYYVRTHEKYTQADGDPIVSPFESIPSGFWWAIVTLMTVGYGDVVPLSVGGRFVACATMLCGLLAIALPVAVIGTNFASEWE 348          
BLAST of EWM27103.1 vs. NCBI_GenBank
Match: gi|1129189903|gb|OLP95259.1| (Potassium voltage-gated channel subfamily A member 7 [Symbiodinium microadriaticum])

HSP 1 Score: 128.642 bits (322), Expect = 1.985e-27
Identity = 84/280 (30.00%), Postives = 139/280 (49.64%), Query Frame = 0
Query:   54 NALRVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTLRHPTTCADPVCEPGPTTFCTEVVCRPRENRIIWHLELWTIVIFTIDYLLRVFCVPAVPVDLVFPRSLEYTIDGRLKDRSNYYRMDPCKKTTKYMLSGLNIIDVISIVPFYVYL----LAPYPAIRVFRFLRFLLIFKLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSV---TMEFPAGGFLRPNDRNTALEQSPFQSIFTGVYWYVVNTTTLG 326
              LR  +F  L  P SS +A + S F+ A IL+  +S ++ +IP     P  C          +  T   CRP+ ++  + +EL  I+IFT+DY+LR+    A+       R L     G  K+   +      K + +Y++  LN++D+ +IVPFY+ L    L     IRV R +R   + K   + R    +I   ++ SLP ++    LT ++ ++F S +++ EG  YSV   T E+P G ++RP      +E +PF+SI    +W+    TT+G
Sbjct:  692 EGLRRTVFKVLNDPSSSEVAKWASYFITAVILVTTVSMLLESIPELSHVPDAC---------DSLVTVENCRPQPSQAFFQIELVCIIIFTVDYVLRICTAHAMTA-----RELGVQYVGE-KEVPAW------KASWRYVIQWLNLVDLFAIVPFYLELAGLQLGSSAVIRVIRLIRIFRLLK-SPKMRNCVDMIVDIVKDSLPGIVSVFSLTMLVCVLFASCIYFAEGTQYSVEHFTSEYPYGVYVRPTIDGYGMEVTPFRSILHAFWWFFTTATTVG 949          

HSP 2 Score: 84.7297 bits (208), Expect = 2.230e-13
Identity = 59/189 (31.22%), Postives = 100/189 (52.91%), Query Frame = 0
Query:  187 CKKTTKYMLSGLNIIDVISIVPFYVYLLAPYPAIRVFRFLRFLLIFKLGRRFREAGAI---ISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEF-----PAGGFLRPNDRNTALEQSPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQY 367
            C +   Y  + LN+ID+ +IVPFYV ++    ++   R LR + + +L +  +    I   +  T+ + +P L + +F   +  ++F S++FYFEG  +SV  +F     P G F+R +     L  +PF+SI   ++W    TTT+G  ++ PT+  GR       Y G++ LALPI ++  NF   Y
Sbjct:  458 CIRAACYASTTLNLIDLAAIVPFYVGIMLGSESVGAVRILRLMRVLRLLKLAKHHPGITLCVEATVESGVP-LAVLMFFNIIFGVIFASVIFYFEGSEFSVDDQFLQNGFPRGVFVRMDTYGNRL-LTPFRSIPISLWWVFTTTTTVGYGDMAPTSHVGRAIGVLCFYTGIIFLALPIGVLSSNFEAAY 644          
BLAST of EWM27103.1 vs. NCBI_GenBank
Match: gi|302837025|ref|XP_002950072.1| (hypothetical protein VOLCADRAFT_104589 [Volvox carteri f. nagariensis] >gi|300264545|gb|EFJ48740.1| hypothetical protein VOLCADRAFT_104589 [Volvox carteri f. nagariensis])

HSP 1 Score: 125.561 bits (314), Expect = 1.335e-26
Identity = 95/349 (27.22%), Postives = 154/349 (44.13%), Query Frame = 0
Query:   51 DQLNALRVLIFVTLEHPRSSRLAWYISIFLVACILLNAISFMVGTIPSTLRHPTTCADPVCEPGPTTFCTEVVCRPRENRIIWHLELWTIVIFTIDYLLRVFCVPAVPVDLVFPRSLEYTIDGRLKDRSNYYRMDPCKKTTKYMLSGLNIIDVISIVPFYV--YLLAPYPAIRVFRFLRFLLIF---KLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIY--------SVTMEFP--------------AGGFLRPNDRNT----ALEQSPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQYN 368
            ++ N L   +   +    SS  A  +S F+VA I+++ +SF + TIPS   H                       P   R+   +E  TI IF +DYLLR    P           L++T+D                          NIID+I+IVP+Y+  ++   +    VFR +R L +F   KLG R+ +   ++  +LR SL  L +  F  ++  + F ++M+Y E G Y         + +  P              AG ++RP +         + SPF+SI +G +W +V   T+G  + +P T GG+  +C    CG+L+LALPI++IG  F+  + 
Sbjct:   90 NRFNYLMSRLHTFMTDANSSVYAAAVSQFMVASIIISVLSFCLETIPSFQSHRA---------------------PVAARVFTWVEAVTIQIFALDYLLRFISAPV---------KLKFTVD------------------------PFNIIDLIAIVPWYIITWVGTDFNGTTVFRVVRLLRVFRVLKLGGRYSKL-LVVLHSLRKSLDMLGLMAFFISLCIVFFATLMYYAERGSYDEQLGELSELDVWVPMRSRAAALGNRGAGAGYYVRPYEVQMIDYGVPKPSPFESIVSGFWWAIVTIMTVGYGDTFPVTAGGKAIACVTMICGILTLALPISVIGATFTNDWE 383          
BLAST of EWM27103.1 vs. NCBI_GenBank
Match: gi|922856246|gb|KOO24621.1| (voltage-gated ion channel superfamily [Chrysochromulina sp. CCMP291])

HSP 1 Score: 117.472 bits (293), Expect = 5.103e-25
Identity = 75/247 (30.36%), Postives = 127/247 (51.42%), Query Frame = 0
Query:  128 ENRIIW-HLELWTIVIFTIDYLLRVFCVPAVPVDLVFPRSLEYTIDGRLKDRSNYYRMDPCKKTTKYMLSGLNIIDVISIVPFYVYLLAP------YPAIRVFRFLRFLLIFKLGRRFREAGAIISRTLRASLPALLIFVFLTTVLAIVFGSMMFYFEGGIYSVTMEFPAGGFLRPNDRNTALEQSPFQSIFTGVYWYVVNTTTLGNANLYPTTTGGRIASCFIAYCGLLSLALPITIIGQNFSQQY 367
            ENR  +  +E + I++FT++Y+LR+F  PA P  L                              KY+++  NI+D ISI+P+Y+    P         +R+ R  R   IFK+ + F+    +++ TLR S  ALL+      V +++F ++++ FE G Y    +     ++RP+       +SP++SI T ++W +V  TT+G  + +P T  G++ + F  + GL+ L+LPITIIG NF  +Y
Sbjct:   19 ENRTPFGEIETFCIMVFTVEYILRLFTSPAGPGVL------------------------------KYLINLANIVDFISIIPWYIERSLPGGSPQVLSVLRLIRLTRITRIFKMSKSFQGIIMLLT-TLRKSATALLMLFAFMGVFSLLFATLIYTFEMGEYDEIRK----QYVRPDG-----SRSPYESIPTSMWWTIVTMTTVGYGDQFPVTELGKLVAVFTMFSGLIVLSLPITIIGANFDSEY 225          
The following BLAST results are available for this feature:
BLAST of EWM27103.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109280|gb|EWM27103.1|0.000e+0100.00Ion transport [Nannochloropsis gaditana][more]
gi|585110762|gb|EWM28384.1|2.976e-4832.92expulsion defective family member (exp-2) [Nannoch... [more]
gi|585110761|gb|EWM28383.1|1.895e-4732.92expulsion defective family member (exp-2) [Nannoch... [more]
gi|551655720|ref|XP_005830634.1|1.528e-3229.24hypothetical protein GUITHDRAFT_110453 [Guillardia... [more]
gi|585105815|gb|EWM24405.1|6.454e-3232.92potassium voltage-gated channel subfamily d member... [more]
gi|1004145973|gb|KXZ53950.1|7.172e-3027.61hypothetical protein GPECTOR_6g868 [Gonium pectora... [more]
gi|159464797|ref|XP_001690628.1|2.498e-2927.02hypothetical protein CHLREDRAFT_144354 [Chlamydomo... [more]
gi|1129189903|gb|OLP95259.1|1.985e-2730.00Potassium voltage-gated channel subfamily A member... [more]
gi|302837025|ref|XP_002950072.1|1.335e-2627.22hypothetical protein VOLCADRAFT_104589 [Volvox car... [more]
gi|922856246|gb|KOO24621.1|5.103e-2530.36voltage-gated ion channel superfamily [Chrysochrom... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3572rna3572Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications