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Properties
| Property Name | Value |
|---|
| Product | digalactosyldiacylglycerol synthase 1 |
| Orig transcript id | gnl|cribi|Naga_100010g107.6182.mrna |
| Orig protein id | gnl|cribi|Naga_100010g107.6182 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:664703..667339 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3546 ID=rna3546|Name=rna3546|organism=Nannochloropsis gaditana|type=mRNA|length=3098bp
CTTCCAAACAGGAGGGTCTGAGGCCATCTTCACGGTCGCCCTTGCTGGAA
AGAAGCACACGGAGAGTGCCGCAGAGATTTGACATCGCTGGATGGCATGA
GTGCCGCGCCTGCGGCTCCGGCGTCCTGTGATCGCTCCAGTTTACGGTCT
CGCGGGCCGGGGGCAGCTCGAGCGGGTCCACCTAGGGCCACGCCTAGCGC
TGCAGCACCTGTCGTTCCCGTCGCACTCAAGGATCCCGACGCGCTTCTAG
AGGGATGGCTGAAAAAGCGGGGCGTACGGATACCAGGACACTGGTCTGAG
CGTTACTTTGTGTTGAAAGATGATCGCCTGCTCTACTACCTGAAGGCCTC
CGACGCAGTGGCTCGCGGCGCCTACATCTTGGATCGGACTTGTGTGGTCT
CCGAAGTCAAGCCCTATACAACCTCCTATGACAAGAGGAAAACGTTGCAC
GCATTTCGCATTGTTTGGCCCGAGGCTGTAGAGCTGATGGAGGGTTTCGA
GGGAGGGCAAGCCGCAGAGCACGAGAACCCCGCAGCGCCGGTCTCTAAGG
AGGCCGGCCCGAGGACCTCCAACCGATTCGTCGGTCCTCTATCCGCCATG
GCAAGTCTCAATTCTCTGTCCCTCTCTTCAACCTTGGCGGGCGCCAGGAA
TGCTCAGAGCGTGGAAGACACCCCCTCCGGGGAGGCAAGCATGGATCCCC
ACGTCCTGTCCACGAGTCAATCCTTCTCTCAAACACCGCACCCGCCGCAA
TCGACCACAAAAATTATTCGCAGTGCAAATAGTTTTCTGGAAAGTAACAA
AGCTGGAATGACGCACCGTCATGGGAAGCGAGGCGCGACCTCGGTCAATG
AGGGCGCTGGATACCACCGAGCCGGGAGCAGCGTTGCAAACACCAACAGC
ACCGCCACGCTGGCGACAGGCGGGGCCATGGTGGCTATGGCCGTTGGCGG
GGTGGTAGTGGGGGCCATGACGGCGGGGCTAGGACTGGTCGCCCCCATGG
TGGTTGTGGGCTTGACCGCGGCGACGGGGTCGGGGGCTGCCGTCTACGGG
GCCGCTGTATCCTCGTCGCAGACCGGCCTCAAGATAAAGCAAGTGGCATT
GGTGCTGGCGTCGGAGAGCAAGGAAAGCGCGAAGGAATGGCGGTCGGCCT
TGGAGGCCCAGATACGCTGGAGTCAAAGTTTTCCCGGTGCGGACTGGCTC
TCCATGGTCGGCTTGGACCGTCGCTTGCCCGCCCGCATCGGGAAAGGTGG
GAGCTTCAAACACTCCCGGAGGCAGGACGGCCAGCGTCCATCGAACAAAT
TGGACGATGTTGAGCGCTGGGGCCGGGCGGCCTGCTGGCGCCCGTGGGGA
GTGTACAACGGGTTGCGAGTCTACGAGATCGATCACGTCACCACGCGCTC
CGGCGTTGTCAAGCGCCCTGCTGGCTTGCGCGACGGCCTTGAAGGCCAAG
GCAATGGAGGCAGCACACTGTTTGGGGGAGGGAGAAGCCGCCCTTCTTTT
CCTTGCCGCAAGCTTCAGTTGAGGGTGGGGGCCACCCCCCTGCAGACCTT
CATTGCCCTCGTCTCCGTGCCCTGCCGGGTCCTCAACGGCGTCATCGAGA
GAGTGCGGAATGTGGAGCATTTGGATGACCAGACGGATGTCATCCACCTG
TCCCTCAAGCCGTTTTTTTTCTGGCCTACCTGGACGGCCCCGCGCGACTT
CTGCCTCTTGCGCTCCTGGCGCTACGACGAGGACGGGACCTACGTCATCT
GCTATGACTCCACCATCCACCCAGGCTGTCCCCCCGTCGATGGCTTCGTC
CGGGGAAGCATGCACAGTGTCTACACGATCAGTCCGAAGCGTCGATCGCG
TCGGGGGATAAGATCGGCGGAATCGGACGAGGCACCTGAGAGCTTGCTTA
CCCACATCCTGCAAGTCGACCCGCGGGGGTGGATCTGGCACCGACTGGGG
TATTTGGACGCTTTCATCGTGGAGATGCTCTGTCAAGGCCTGGACGTGCG
CGATCTGCTGGAGGCAGAGAGGTTCATGACCGTGAACGTGGACACTGACG
AGGAGGGAGGGACTACTGGCACCGCTGTGAGAGGGGAAACACCGGAATTG
GGGGCGGAAGCTGGGGGTGCCACCTCCAGCAGTGGCGGCAGGGGGAGCGG
TACTCTAGTAACACACCGACCGACTGTTCCAGCGGATATGTGGGGCGACA
TAGACGCCTCGAGCTTCGTAGTCAGAGGGCCGAACTACGCTGCCACCAGG
CTAAAGATCCCTTCAGCGGCCGTGGCCTTCCGATTGCTGGCTGTGGATCT
CTTTGAGCTCCCTGAGGCCGTCCAGAACATCGCAGGGCACCCAAATAATC
GCGTGCAGGCCGCTATGGCCGCCGGAGATTGCCCCTCGTTTGTTTTCGTC
GTGCAGCTCCAGATCCCAGGAGGAGAGCAACAGCTGGGTTATGTTACTTA
CTTTGCGCCGACTGACATGTCTGTTCTGGAGGAAGACACACCATTAGCTC
GCCTGCTGAAGCCCTTCTTCTTTGGACGTGACGACGGCTACCGAGATCTA
CGATTCAAGCTGATCCCCAAAATTGTGGAAGGAAATTGGGTTGTCCGAAA
GTCAGTGGGGTCCACTCCTGCCATATTGGGCACGAAACTGAAGCAAACCT
ATCACAAAGGCACCAACTACTTCGAATTGGATGTGAACATAGCATCTTCC
TCGGTGGCAGCAGGCGTCGTCCGCTTGGCGGCGGGATACGCCAAAACTCT
GGTGGTAGATCTTGCGCTGGTCATTCAGGGGGAGGCGGAGGACGAGTTGC
CTGAGCGGGTGCTTGCGGGCTGGAGGATCAACCACATGGACTTGGCGTCG
GCAAAGCGCCTGGAATAGTAGAGTGCAAGCTTCCTAGTCGCACAGTGTAA
TGTATTATATCATTTTATTGGCCAAGGGCGTGAGATACGCGCCTTGAAAA
GCGAAGAAAAAGTCCCATTGTAAATTTGAGCAGGTCTGAGACATTCCAAA
TCGTGGCTCGCAAGGACGCTTTGTAGACCCATCTCGACACAAGGTATTCA
TTTGTTCGTTCCACCAGTTTTCGAATGAACATCTCACACATTTATTGC back to topprotein sequence of rna3546 >rna3546-protein ID=rna3546-protein|Name=rna3546|organism=Nannochloropsis gaditana|type=polypeptide|length=604bp
MLQPTFRTLLVLISLVVAVSASTLTPDPLAPLRGLAPKRDDRNGQDAVLP
ESDLSSPDRKIWIITTASLPWMTGTAVNPLLRAAYLSRGRPAGKVTLVVP
WLDEDDQKVVYPHGKTFRRPEDQERYIREWLGHRAGLGAEAKNLRIQFYS
GRYHPELGSIFSVGDVPALIPDEDADVLILEEPEHLNWYRAPGVPWTRKF
RHVVGICHTNYLVYSKSIQGGSMKSAFLFFMNQWMCRAYCHKVIKLSGAL
QRFAPGKEEVENVHGVRREFLEAGASVRGSEMEGAYFIGKMLWPKGMDRL
IPMMVYARERDGRSFKMDVYGSGPDEEEIKRKVTARSLDITFHGAVDHAQ
LTHYKVFINPSISEVLCTTVAEALAMGKFVIIAAHPSNEFFMRFTNCLTF
RSKEEFATQVLWALAHVPAPLSAEERESLTWEAATRRLLKASLVTVGTDS
HSKVDKALEKAHTWVSKGERGDRLRRIAGGDIIADEAPPGPRHYANPPTA
YECMAEAGARDAEGRLARAAEAAVAAAGMHSKVPWRGAHAGQGLGLGRKA
SVPSECCGDRDCQALAGAGFGGAGKPSTGAPPASSSPPFTGAVTGSRGAV
GGKS back to topmRNA from alignment at CM002461.1:664703..667339- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3546 ID=rna3546|Name=rna3546|organism=Nannochloropsis gaditana|type=mRNA|length=2637bp|location=Sequence derived from alignment at CM002461.1:664703..667339- (Nannochloropsis gaditana)
AACACGATGCAGAAACGTTTGCCTGTACCACGTCGTTATATTTTCTACGA
CGAAGTGGATGATGGTGTGGGCATGTTATGGTGGTTTTCGGCTTGGATTA
TCACGCCGCTGCCTCGATTAGGACCCCGTCCAGCATTAGAACGATCTTAT
CTACGAGTTTGCGCTCTCCCCCCCTCAACCAGACTTTCGAAACATTTCCA
GCGGCCGTGGGAGGCGGCGGAGGCTCATGCTCCAGCCAACCTTCAGAACA
CTGCTGGTGCTGATATCTCTCGTTGTTGCCGTGTCTGCCTCCACGCTCAC
TCCCGATCCACTAGCTCCGCTCCGAGGCCTGGCACCAAAACGCGACGACC
GCAATGGGTAAGTTGGGCGCCTCAGAGCCACCACCCCCTCGCACCATGCC
AACATACACTACTACCTCACTCACATACAGTCAGGATGCAGTATTGCCGG
AGTCGGACCTGAGTAGCCCCGATCGCAAGATCTGGATTATCACCACGGCC
AGCCTCCCTTGGATGACCGGGACCGCCGTCAATCCCCTTCTGCGTGCTGC
ATACTTGTCGCGAGGCCGACCGGCTGGGAAAGTCACCCTTGTGGTGCCAT
GGTTGGACGAGGACGACCAGAAAGTAGTCTATCCGCACGGGAAGACATTC
CGAAGGCCGGAAGATCAGGAGCGTTACATTCGGGAGTGGCTCGGCCATCG
CGCGGGTCTGGGCGCGGAGGCCAAAAATCTGCGGATTCAATTCTACTCCG
GCCGTTACCATCCTGAGCTGGGGTCGATTTTCTCCGTGGGGGATGTGCCG
GCGCTGATCCCGGACGAGGACGCGGACGTGTTGATCCTGGAGGAGCCCGA
GCACTTGAACTGGTACCGGGCCCCCGGAGTGCCCTGGACAAGGAAGTTCC
GGCACGTGGTGGGCATCTGCCACACCAACTACCTGGTCTACAGCAAGTCC
ATACAGGGCGGGAGCATGAAATCGGCCTTCTTGTTCTTCATGAACCAGTG
GATGTGCCGCGCCTACTGCCACAAGGTCATCAAGCTCTCAGGGGCCCTGC
AGCGCTTCGCGCCTGGAAAGGAGGAGGTTGAGAACGTGCACGGCGTCAGG
CGAGAGTTTCTGGAGGCGGGAGCCAGTGTCCGAGGGTCGGAGATGGAGGG
CGCGTACTTCATTGGGAAGATGCTGTGGCCCAAGGGGATGGACCGGCTGA
TCCCCATGATGGTCTATGCGCGCGAACGCGACGGGAGGAGCTTCAAGATG
GACGTATATGGCTCGGGGCCGGACGAGGAGGAAATCAAGCGGAAGGTGAC
GGCCCGCTCTCTGGACATCACTTTCCACGGTGCCGTGGACCACGCCCAGC
TCACCCACTACAAGGTCTTTATCAACCCCTCCATCTCCGAGGTCCTATGC
ACCACCGTGGCGGAGGCACTGGCCATGGGCAAATTCGTGATCATCGCCGC
ACACCCGTCCAACGAATTTTTCATGCGTTTCACCAACTGTCTGACCTTCC
GGAGCAAGGAGGAATTCGCCACTCAGGTGCTGTGGGCGCTCGCCCATGTC
CCCGCCCCCCTGTCGGCGGAGGAGCGCGAGAGTTTGACGTGGGAGGCGGC
GACCCGACGACTCCTGAAAGCGTCGCTGGTGACCGTGGGCACAGACTCGC
ATTCGAAGGTGGACAAGGCGCTGGAAAAGGCGCACACCTGGGTCTCCAAG
GGGGAGAGGGGAGATCGACTACGGCGGATAGCAGGAGGCGATATCATCGC
CGATGAAGCCCCCCCCGGACCCAGACATTACGCGAACCCGCCCACAGCCT
ATGAGTGCATGGCGGAAGCCGGAGCAAGGGACGCGGAAGGTCGGCTGGCA
CGGGCGGCGGAGGCAGCTGTGGCAGCAGCGGGCATGCACTCTAAAGTGCC
TTGGCGGGGGGCCCACGCGGGGCAGGGGTTGGGACTAGGGAGGAAGGCAT
CGGTGCCGTCAGAGTGCTGCGGGGACCGGGATTGTCAGGCTTTGGCGGGG
GCTGGTTTTGGGGGGGCTGGGAAGCCCTCTACGGGTGCCCCTCCGGCATC
GTCTAGTCCGCCGTTCACGGGAGCGGTGACCGGGTCGAGGGGCGCGGTCG
GGGGGAAGTCATGATAAAGACACAGGCGTGCATTAGTTTGATTCGATAGT
TTTATTGGCTTTATGACAGTAGTACGTTACGTGCCGGGCCCTATTTGTTG
ATACTACGTGGGAAATTACTACAGGAGGCAATTACCCAGTCCTGAACGGC
CGTGGACGTGCGATGACAGAAGAATCAGAGCGCGCAGATAGTGGGAGATG
CCGCCGACGGGAGACGTAATGTCTTGCGTGGTGAGGCGACGCGGAAGCAA
ATTGTAAATGATAAATGAAATTTGAGGAGTAGACTGGTGTGGGGGGGAAC
TGGAGGGCATAAAGCGATGCGAACGGTCTGAGGTAGCCGGTGAAACAGCG
TTAAAAAGAACGTTACTAAGATGACTCAAGGAGTTGCACGTTGTTGAGAG
CTCAGTTGCTCTGTGATGAGGGCAATAAATGTGTGAGATGTTCATTCGAA
AACTGGTGGAACGAACAAATGAATACCTTGTGTCGAGATGGGTCTACAAA
GCGTCCTTGCGAGCCACGATTTGGAATGTCTCAGACC back to topCoding sequence (CDS) from alignment at CM002461.1:664703..667339- >rna3546 ID=rna3546|Name=rna3546|organism=Nannochloropsis gaditana|type=CDS|length=3630bp|location=Sequence derived from alignment at CM002461.1:664703..667339- (Nannochloropsis gaditana)
TCAGGATGCAGTATTGCCGGAGTCGGACCTGAGTAGCCCCGATCGCAAGA
TCTGGATTATCACCACGGCCAGCCTCCCTTGGATGACCGGGACCGCCGTC
AATCCCCTTCTGCGTGCTGCATACTTGTCGCGAGGCCGACCGGCTGGGAA
AGTCACCCTTGTGGTGCCATGGTTGGACGAGGACGACCAGAAAGTAGTCT
ATCCGCACGGGAAGACATTCCGAAGGCCGGAAGATCAGGAGCGTTACATT
CGGGAGTGGCTCGGCCATCGCGCGGGTCTGGGCGCGGAGGCCAAAAATCT
GCGGATTCAATTCTACTCCGGCCGTTACCATCCTGAGCTGGGGTCGATTT
TCTCCGTGGGGGATGTGCCGGCGCTGATCCCGGACGAGGACGCGGACGTG
TTGATCCTGGAGGAGCCCGAGCACTTGAACTGGTACCGGGCCCCCGGAGT
GCCCTGGACAAGGAAGTTCCGGCACGTGGTGGGCATCTGCCACACCAACT
ACCTGGTCTACAGCAAGTCCATACAGGGCGGGAGCATGAAATCGGCCTTC
TTGTTCTTCATGAACCAGTGGATGTGCCGCGCCTACTGCCACAAGGTCAT
CAAGCTCTCAGGGGCCCTGCAGCGCTTCGCGCCTGGAAAGGAGGAGGTTG
AGAACGTGCACGGCGTCAGGCGAGAGTTTCTGGAGGCGGGAGCCAGTGTC
CGAGGGTCGGAGATGGAGGGCGCGTACTTCATTGGGAAGATGCTGTGGCC
CAAGGGGATGGACCGGCTGATCCCCATGATGGTCTATGCGCGCGAACGCG
ACGGGAGGAGCTTCAAGATGGACGTATATGGCTCGGGGCCGGACGAGGAG
GAAATCAAGCGGAAGGTGACGGCCCGCTCTCTGGACATCACTTTCCACGG
TGCCGTGGACCACGCCCAGCTCACCCACTACAAGGTCTTTATCAACCCCT
CCATCTCCGAGGTCCTATGCACCACCGTGGCGGAGGCACTGGCCATGGGC
AAATTCGTGATCATCGCCGCACACCCGTCCAACGAATTTTTCATGCGTTT
CACCAACTGTCTGACCTTCCGGAGCAAGGAGGAATTCGCCACTCAGGTGC
TGTGGGCGCTCGCCCATGTCCCCGCCCCCCTGTCGGCGGAGGAGCGCGAG
AGTTTGACGTGGGAGGCGGCGACCCGACGACTCCTGAAAGCGTCGCTGGT
GACCGTGGGCACAGACTCGCATTCGAAGGTGGACAAGGCGCTGGAAAAGG
CGCACACCTGGGTCTCCAAGGGGGAGAGGGGAGATCGACTACGGCGGATA
GCAGGAGGCGATATCATCGCCGATGAAGCCCCCCCCGGACCCAGACATTA
CGCGAACCCGCCCACAGCCTATGAGTGCATGGCGGAAGCCGGAGCAAGGG
ACGCGGAAGGTCGGCTGGCACGGGCGGCGGAGGCAGCTGTGGCAGCAGCG
GGCATGCACTCTAAAGTGCCTTGGCGGGGGGCCCACGCGGGGCAGGGGTT
GGGACTAGGGAGGAAGGCATCGGTGCCGTCAGAGTGCTGCGGGGACCGGG
ATTGTCAGGCTTTGGCGGGGGCTGGTTTTGGGGGGGCTGGGAAGCCCTCT
ACGGGTGCCCCTCCGGCATCGTCTAGTCCGCCGTTCACGGGAGCGGTGAC
CGGGTCGAGGGGCGCGGTCGGGGGGAAGTCATGAATGCTCCAGCCAACCT
TCAGAACACTGCTGGTGCTGATATCTCTCGTTGTTGCCGTGTCTGCCTCC
ACGCTCACTCCCGATCCACTAGCTCCGCTCCGAGGCCTGGCACCAAAACG
CGACGACCGCAATGGTCAGGATGCAGTATTGCCGGAGTCGGACCTGAGTA
GCCCCGATCGCAAGATCTGGATTATCACCACGGCCAGCCTCCCTTGGATG
ACCGGGACCGCCGTCAATCCCCTTCTGCGTGCTGCATACTTGTCGCGAGG
CCGACCGGCTGGGAAAGTCACCCTTGTGGTGCCATGGTTGGACGAGGACG
ACCAGAAAGTAGTCTATCCGCACGGGAAGACATTCCGAAGGCCGGAAGAT
CAGGAGCGTTACATTCGGGAGTGGCTCGGCCATCGCGCGGGTCTGGGCGC
GGAGGCCAAAAATCTGCGGATTCAATTCTACTCCGGCCGTTACCATCCTG
AGCTGGGGTCGATTTTCTCCGTGGGGGATGTGCCGGCGCTGATCCCGGAC
GAGGACGCGGACGTGTTGATCCTGGAGGAGCCCGAGCACTTGAACTGGTA
CCGGGCCCCCGGAGTGCCCTGGACAAGGAAGTTCCGGCACGTGGTGGGCA
TCTGCCACACCAACTACCTGGTCTACAGCAAGTCCATACAGGGCGGGAGC
ATGAAATCGGCCTTCTTGTTCTTCATGAACCAGTGGATGTGCCGCGCCTA
CTGCCACAAGGTCATCAAGCTCTCAGGGGCCCTGCAGCGCTTCGCGCCTG
GAAAGGAGGAGGTTGAGAACGTGCACGGCGTCAGGCGAGAGTTTCTGGAG
GCGGGAGCCAGTGTCCGAGGGTCGGAGATGGAGGGCGCGTACTTCATTGG
GAAGATGCTGTGGCCCAAGGGGATGGACCGGCTGATCCCCATGATGGTCT
ATGCGCGCGAACGCGACGGGAGGAGCTTCAAGATGGACGTATATGGCTCG
GGGCCGGACGAGGAGGAAATCAAGCGGAAGGTGACGGCCCGCTCTCTGGA
CATCACTTTCCACGGTGCCGTGGACCACGCCCAGCTCACCCACTACAAGG
TCTTTATCAACCCCTCCATCTCCGAGGTCCTATGCACCACCGTGGCGGAG
GCACTGGCCATGGGCAAATTCGTGATCATCGCCGCACACCCGTCCAACGA
ATTTTTCATGCGTTTCACCAACTGTCTGACCTTCCGGAGCAAGGAGGAAT
TCGCCACTCAGGTGCTGTGGGCGCTCGCCCATGTCCCCGCCCCCCTGTCG
GCGGAGGAGCGCGAGAGTTTGACGTGGGAGGCGGCGACCCGACGACTCCT
GAAAGCGTCGCTGGTGACCGTGGGCACAGACTCGCATTCGAAGGTGGACA
AGGCGCTGGAAAAGGCGCACACCTGGGTCTCCAAGGGGGAGAGGGGAGAT
CGACTACGGCGGATAGCAGGAGGCGATATCATCGCCGATGAAGCCCCCCC
CGGACCCAGACATTACGCGAACCCGCCCACAGCCTATGAGTGCATGGCGG
AAGCCGGAGCAAGGGACGCGGAAGGTCGGCTGGCACGGGCGGCGGAGGCA
GCTGTGGCAGCAGCGGGCATGCACTCTAAAGTGCCTTGGCGGGGGGCCCA
CGCGGGGCAGGGGTTGGGACTAGGGAGGAAGGCATCGGTGCCGTCAGAGT
GCTGCGGGGACCGGGATTGTCAGGCTTTGGCGGGGGCTGGTTTTGGGGGG
GCTGGGAAGCCCTCTACGGGTGCCCCTCCGGCATCGTCTAGTCCGCCGTT
CACGGGAGCGGTGACCGGGTCGAGGGGCGCGGTCGGGGGGAAGTCATGAA
TGCTCCAGCCAACCTTCAGAACACTGCTGGTGCTGATATCTCTCGTTGTT
GCCGTGTCTGCCTCCACGCTCACTCCCGATCCACTAGCTCCGCTCCGAGG
CCTGGCACCAAAACGCGACGACCGCAATGG back to top
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