Naga_100010g107, gene3416 (gene) Nannochloropsis gaditana

Overview
NameNaga_100010g107
Unique Namegene3416
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:664703..667339 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100010g107
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:664703..667339 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL134ngnoL134Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL131ngnoL131Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL130ngnoL130Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02110NO07G02110Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3546rna3546-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3546rna3546Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3546

>rna3546-protein ID=rna3546-protein|Name=rna3546|organism=Nannochloropsis gaditana|type=polypeptide|length=604bp
MLQPTFRTLLVLISLVVAVSASTLTPDPLAPLRGLAPKRDDRNGQDAVLP
ESDLSSPDRKIWIITTASLPWMTGTAVNPLLRAAYLSRGRPAGKVTLVVP
WLDEDDQKVVYPHGKTFRRPEDQERYIREWLGHRAGLGAEAKNLRIQFYS
GRYHPELGSIFSVGDVPALIPDEDADVLILEEPEHLNWYRAPGVPWTRKF
RHVVGICHTNYLVYSKSIQGGSMKSAFLFFMNQWMCRAYCHKVIKLSGAL
QRFAPGKEEVENVHGVRREFLEAGASVRGSEMEGAYFIGKMLWPKGMDRL
IPMMVYARERDGRSFKMDVYGSGPDEEEIKRKVTARSLDITFHGAVDHAQ
LTHYKVFINPSISEVLCTTVAEALAMGKFVIIAAHPSNEFFMRFTNCLTF
RSKEEFATQVLWALAHVPAPLSAEERESLTWEAATRRLLKASLVTVGTDS
HSKVDKALEKAHTWVSKGERGDRLRRIAGGDIIADEAPPGPRHYANPPTA
YECMAEAGARDAEGRLARAAEAAVAAAGMHSKVPWRGAHAGQGLGLGRKA
SVPSECCGDRDCQALAGAGFGGAGKPSTGAPPASSSPPFTGAVTGSRGAV
GGKS
back to top
Synonyms
Publications