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Properties
| Property Name | Value |
|---|
| Product | putative histone-lysine n-methyltransferase ash1l |
| Orig transcript id | gnl|cribi|Naga_100010g98.6200.mrna |
| Orig protein id | gnl|cribi|Naga_100010g98.6200 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:632147..635507 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3538 ID=rna3538|Name=rna3538|organism=Nannochloropsis gaditana|type=mRNA|length=3085bp
CCAGACTATAAAACAAGCCTCCCAAGATTGTCATCCACTTGATTCCCGTA
TCCTTTAATAAAAAACAGAAGGATGACGATTCCCGCGGCTAAGCAGCGCC
GCTCATCGTCTCCAGTTGTCTCTTCCCTCGGCACGCGTCGACAGAGTTGG
TTGGGCGACTTGCAAAAGCCTTCACGGGCAGTAATGGACAAGAATTTCTC
TTCAACGAAGTCACCCTTTATGAATGCAGCACCTGCACGGACATCAACAA
CCTTACTGTCTCAGCAGGATGGTGACTGTTTGGAAAGCACTGGGCCTTCG
CAAAAGATAAAGGTGTGTCCCAAGCCGCTTCTCCTCTCCAAACAACAAAA
TGGGCCGGAGGACGAAGCGACTTTTCAATCAGTTCAAGTAGTCTGTCGTT
TTCGACCACTCCGGGAGGAGGAACCCTTTGAATGGTACAAAGCAGTAGAA
GACAGTGGAGCGGTTTCTGTAAATACATCTGAGCGTACCTTGAATTTCGC
TTTCGATCGGGTTTTTGGTTCTCAGGCCACACAGGCAGACGTCTACGGTT
CTGTCCGCCACGTGGTGCTAGGTCTGCTTGATGGCTTCAACGGTACCATC
CTAGCCTACGGGCAAACTGGCAGCGGTAAAACTTACACAATGATGGGACG
GCCTGAGAAACGAACAAACCCAGTGTACGGTCGCCCGGAAAGTCCCCGTC
CTTCGACCGGCCACTCTGAGGGAGTGGGCTTCATTCCACGCGTGGTGGAT
GATCTATTTGCTATGGTTGAAGAGTTTCAGGATACGATAGAATTCACAAT
CTGTGTTTCCTGTGTAGAAGTTTATTGCGAGAAAGTACGCGATTTACTGA
ATCCTAGTAGAAGCGCAGACTTGAAGCTCCGCGACGACCCGTACGGCGGC
GTAGTTGTAATGGGAGCAACTGAGATCTTCGTGGAAAGTCAGGCTGAGAT
GCACAGTGTGATTGAGGCTGGACAATTGGGGCGCGTGACGGCGGCTACGG
GAATGAACGAAGAGAGCTCCCGTTCGCACGCCTTGCTGCTCGTAAAAGTG
ACCCAGAAGAACACGGAGACGGAGCACATCCGTCGAGGCAAGCTCGTGAT
GGTCGACTTAGCGGGCTCCGAGCGCATTGCAAAGACAAGGGCTGAGGGTC
TGCGTCTTGAGGAGGCGAAGAACATTAATCGGTCTCTCACGACACTAGGA
ATGGTCATCTCAGCGCTGGTTGACGGCGCCCCGCACGTCCCCTATCGCGA
CGCCAAGCTAACCCGCCTGCTCGCCGAGTCACTGGGCGGTAACTCCAACA
CATGCCTGATCGTGTGCTGCGCACCCGAATTGAGCCATTCTCAGGAAAGC
ATAAGTACGTTGCGCTTCGGGGAACGGGCCAAGAAGGTGAAGAACCACGC
AGTCCGCAACGAGGAGTTGAGTATTTACGAGCTCCGAGAGCAACTCAGGT
GCGCTTTAGGCGAGATAGAGCGCCTCAACGCCGCCTTGACAGGGACTACA
CAAGAGGATAAAGAAGGTTCACAAAGGGTTCCCGTCGTAGGCAGCGACGC
GGGGCAATGTACACCCCCGGCAAAGGAGGATGCTTTACGCGCCCTTGTGT
CGGCCGACCGCCCTCTACAGGTGGCGACAGACGAGGTCTTCCCCCATCCT
GCTACGCCCGTTTCGATTGTGCCCCTTCTCGCGGGTGAGCAGTGTCATTC
ACAATCAGCAGCTTTTCCTGGCGGCGAGGCCGAGCCTACACCGTCACCGT
CATCAGCACTGGACAATAAGGCGGGACGCGTGGAGGGGAAGGAATCGTCT
TTGGCGCCCTTTATGGCGTCGTCATTCGCGACAGGTGCTTACTCATCTTT
CGGAAATTCCGAAAGTCGAGGAGAGCTGACTGCCTCTGAAGCACATTCAA
GCAAATTGCTCGCTTTCCTAATAGAGAGCGAAAGGGAGAAAGACGAGCTG
CGCGGCAGGAACCAGGAGCTAAGTGCTCGGATTCTCGAAGAGGAGACGGC
GGTTGCGCGAGTCTTGGAGGAGCAGGAGGCTCTTCAAACGCGGCTGGGCG
AGGCAGAGGCGTGTTTGAACCAGATGATGCGGGCGATGGGAAAAGTGAGC
CAGGGGCCGGCGAGGAGCGAGAGTCTTAGGGCGGACGGGCGGGGGCACAT
AGGCGAAGGGGTAAATGGCGCGTCTTCACCTCCCGAAGAGGTATCAGAAA
GGGAGCAAGGTAAGCACACAAAGTCATTAGGAGTCTCGCCCGCTGTCCAA
GATGATGAGAGTGTCAACCACAGTACGAGTGTTTCGGGACCCATGTCGCC
TAATTTAGAGCAGATTTACGAGGAGAAGCTCCTAAGCGTAGAGCGGGTCT
GCACATACCTTCAAGATGAATGCGATGCTCAGCGAGATGCATTCGAGCAC
GTGAACAAGGCTCTCCTCAATCAAAATGCGCAACTCGCCTTGCAGAAAGA
CGGCCACGTGCGTCGAATTTTCGCATTAGAAATCAAGATTCAGGAGTTGG
AGACAGCGCTTTGCTCTCTTGGTCGGGATCACACGGAAAATAGACGTGAA
GGAGCAGAGAATACCCTGCGGGACAGGCTTGGGCTTGTAAACTTGCTGCA
ATTTCCTTCGTTCTCGCTCTCTCATACAACACGACAAGCAATCAAGATCA
TACCAGGCGGGCGTAAGACAGGCGGTAGTTTGTCAGGGTCAAGATCTAAG
AAAGGAACGGGGGAACAAGAAATGCAGAAGGTGTGATGAGTGTCGAAGGC
CGCTTTAGACAAGGTAAGTTCAAAAGCAAAATTTTGCTATTGTTGTGTAG
TAAGAAAAAGTTGACAAACTGAAAGACACGACGGAATGGAATGAAATTGC
TCTCAAGAGGAAACACGTCACGTTCGATGAGTAGACAATGTGTAGTATGT
GTATGTTATTTCAAAAAATAGAGCTGTGAGCGAATTACTCATTTCTTACT
TTGCCTTTTGCACTCCTAACAGAATACTTTAAGTTCTGTGCTTTTTTGAA
TGTGAATTCGTTGTTATCATCGTTATTATCACTTCTGTAATTGCGCATGA
ATCATACGTAGTAGACTGAAATATAGAGGGAGTGC back to topprotein sequence of rna3538 >rna3538-protein ID=rna3538-protein|Name=rna3538|organism=Nannochloropsis gaditana|type=polypeptide|length=875bp
MAHRVAVQHQAPLALWQTAHAQGQRRLQHHDNDHKMGTNSPGASPVVCAD
TASQDREKLWHPMLESTSSTLKENPVEGNFDRWLRLGSKKTRASESQFCK
LPPPGLRHQTITSLFDELFADSDAEKDDIVSIASKKCCTFRKDSPAALIR
TSEDGRFAVLDSDNEEESEDAFDPWGSRYLSDEEDSGDDDGSGSRRCKKP
RLGSRGTKEVGLRKALPSQTEVKRAEELDPTWSILATLSHFLQHPNSNIA
KAVQAHLQPCEMIPPYDQAQMLAIQAQAARFLPKLKREERHPKPYKKVRR
IIFHESMKGQADIFKDDSHEHQCQCLSKEEAAMLPPHELENRGVSCDENC
LNRSLNVECSDGTCRFAASGECKNQRIGRKQQAAFRTFKTEGRGWGVQSV
EDVEAGTLVSEYVGEAIDDEEVARRLWLAKQEEGEEADFYMVEAMGTTVD
ARYYGNESRFLNHSCDPNCRLEKWNVGGSYRLGIFAIKDIPAGTEYCWDY
QFANFEGARPKRCRCGAVNCRKVLAGKAYRDEAGGGGDSQAPVSDRLEKL
QRTLSEVQAFRAMLGNKPLDNFGSLVLFFNGRTAPEEMHQAQKSRLWLTY
DGPGVVTRERKRALRAREQKSETVLVSARSNSCTTLLNVTEALNVDARAA
TGTRQAHIALLPCKALQTRLESMLTVHLDEREMGCESRSSSTVTETTSAS
SMTRKEDRKLTKGEANGIGRDLDKHAWPPAKVLIELTDLALRRSRERSTA
VIRRKYRLRRFGLLSLREMRWREAAALPFAVKRAGAARVQSWHESRWQAV
SDMLAFMRQSESKGLWGDMSEDICYSCGCSGDLVCCDACTSAFHLSCAGL
YEVPSDDTWFCTRCKRKVGSVSRRP back to topmRNA from alignment at CM002461.1:632147..635507- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3538 ID=rna3538|Name=rna3538|organism=Nannochloropsis gaditana|type=mRNA|length=3361bp|location=Sequence derived from alignment at CM002461.1:632147..635507- (Nannochloropsis gaditana)
CACTTGGCCCCTTTTCCTCCCACTGATACCCCGGCCAAAACAGGCAAGGT
TCGAACATGAGCTAAACCGAGGCACAAATACTGCAGCTTCAAGGCATCGT
TTGGAATTTATCGCTATTGGCAACTCGCAGGCAGGGGCCGCGTGGTTGTG
GTATTTGCTACCGCTCTTCGTGCTCCTCTTCCCCGCTTTCCCCCCTCTTC
TTCTCCGCTTTTATGCTCTTGCTCTTTTCCTGCCTTGGTCATCCTCCTTG
CGCTCACAGAGGAAATTCCACTCTAATGGTCCTCACTACCCTACGCTCGT
GCACACTCATGTAATGTCAACGTACATACACGCATAGGCATTAAACTCCT
GGTTGGTAAGAGAATCGCTCACCAAGTCCTGGCGATGGCCCACAGAGTAG
CAGTACAGCACCAAGCACCTCTGGCGCTCTGGCAGACAGCTCACGCGCAA
GGTCAGCGCCGACTCCAGCATCACGACAACGATCACAAGATGGGAACCAA
TAGTCCTGGAGCGAGTCCTGTGGTATGCGCTGATACTGCATCGCAGGATA
GAGAAAAACTTTGGCATCCAATGCTTGAGTCAACTTCATCGACCTTAAAA
GAAAACCCTGTAGAGGGAAATTTTGATAGATGGCTCCGATTGGGAAGCAA
GAAAACGAGGGCGAGTGAATCTCAATTTTGCAAGCTTCCTCCTCCTGGTC
TCCGCCACCAGACGATCACAAGCCTTTTCGATGAGCTCTTCGCGGATAGC
GATGCAGAAAAAGATGATATTGTGTCCATTGCGTCGAAGAAATGTTGCAC
CTTCAGAAAGGATTCTCCAGCTGCCCTAATCAGGACTTCCGAGGATGGTC
GCTTTGCTGTTTTGGACTCTGACAACGAAGAGGAAAGCGAGGACGCGTTC
GATCCGTGGGGCAGCAGATATCTGAGCGACGAAGAGGATAGCGGCGACGA
TGACGGATCAGGCTCACGGCGTTGCAAGAAGCCTCGTTTAGGTAGCAGAG
GCACAAAGGAGGTCGGTTTGCGTAAGGCATTGCCGTCCCAGACAGAAGTA
AAACGAGCTGAGGAGCTTGACCCCACCTGGAGTATTTTGGCGACCCTGTC
GCACTTCCTTCAACATCCAAACAGTAACATCGCCAAAGCAGTGCAAGCGC
ACCTTCAGCCTTGCGAGATGATTCCACCCTACGATCAGGCACAAATGCTT
GCCATTCAAGCGCAGGCAGCACGTTTTCTACCGAAGCTTAAAAGAGAAGA
GCGCCACCCCAAGCCCTACAAGAAAGTTCGAAGAATTATATTCCACGAAT
CCATGAAAGGCCAGGCTGATATTTTCAAGGACGACTCGCATGAACACCAA
TGTCAGTGTCTCAGTAAAGAGGAGGCCGCCATGTTGCCTCCGCACGAATT
GGAAAATCGCGGCGTGAGTTGTGACGAGAATTGTTTAAATCGATCCTTGA
ACGTGGAGTGCAGCGACGGGACCTGTCGATTTGCAGCATCTGGAGAGTGC
AAAAACCAGCGCATCGGTCGAAAACAGCAAGCGGCCTTCCGTACCTTTAA
GACAGAGGGCCGCGGATGGGGAGTGCAGTCAGTGGAGGACGTGGAGGCGG
GGACTCTGGTCAGTGAGTACGTTGGGGAGGCGATCGACGACGAGGAAGTG
GCGCGGCGCCTTTGGCTGGCAAAGCAGGAAGAAGGCGAGGAGGCAGACTT
TTATATGGTCGAAGCGATGGGAACAACAGTAGATGCTCGCTATTATGGCA
ACGAAAGTCGATTCTTGAATCACTCATGCGATCCTAATTGCCGGTTGGAG
AAATGGAATGTGGGAGGGAGTTACCGGTTGGGTATCTTCGCGATCAAAGA
TATTCCAGCAGGCACCGAATATTGCTGGGATTATCAATTTGCCAACTTTG
AAGGAGCGCGACCTAAGCGGTGCCGATGCGGAGCCGTCAATTGCCGCAAA
GTCTTGGCGGGTAAAGCCTACCGAGACGAAGCCGGGGGAGGGGGTGACAG
TCAAGCTCCTGTATCCGACCGCCTAGAAAAGCTGCAGCGCACGTTATCTG
AGGTTCAGGCCTTCCGAGCGATGCTTGGAAATAAGCCTTTGGATAATTTT
GGGTCTCTAGTTTTGTTCTTCAATGGACGTACAGCCCCGGAGGAGATGCA
TCAAGCACAGAAGTCACGACTGTGGTTGACCTATGACGGACCTGGCGTCG
TGACACGAGAAAGGAAGAGGGCTCTGCGAGCTCGTGAACAAAAGAGTGAA
ACTGTACTTGTATCGGCTCGCAGCAATTCCTGCACGACTCTCTTGAACGT
GACAGAGGCGCTCAATGTCGATGCGAGGGCAGCAACAGGGACGAGGCAGG
CCCATATTGCCCTGTTGCCGTGCAAGGCTTTGCAGACGCGGCTGGAATCT
ATGCTTACGGTCCACTTAGACGAGAGAGAGATGGGATGCGAGAGCAGAAG
CAGTAGTACAGTGACAGAAACGACATCGGCATCGTCCATGACAAGGAAAG
AGGATAGGAAACTTACGAAAGGGGAAGCGAATGGAATTGGCCGCGACCTT
GACAAGCACGCATGGCCCCCGGCCAAGGTTCTGATTGAACTAACAGATTT
AGCTTTGCGACGATCTAGAGAAAGAAGCACGGCTGTCATACGCCGGAAAT
ACCGGCTTCGCCGATTTGGTCTTCTTTCTCTGCGAGAGATGCGCTGGCGT
GAGGCCGCAGCTTTGCCCTTTGCCGTGAAGCGCGCTGGCGCAGCGAGGGT
GCAAAGTTGGCACGAAAGTCGATGGCAGGCTGTGAGTGACATGCTCGCAT
TTATGAGGCAGAGCGAGTCTAAGGGCCTTTGGGGGGACATGAGTGAGGAC
ATCTGTTACTCATGTGGCTGCAGCGGTGACTTGGTCTGTTGCGACGCTTG
CACCAGCGCCTTTCACCTGAGCTGTGCGGGGCTGTATGAGGTTCCTAGTG
ATGATACATGGTTCTGCACCCGCTGCAAGCGGAAAGTGGGCTCCGTCAGT
CGACGTCCGTAGAACTTTTGGTTTAATTCGATGTGCAGCACTGAGGGGGC
TTAGGTGGAACAAGTTTGTAAAGCTCACACTCTGCAATAAGTCAATAGGA
TGAAAAACGATAGCAAGAATTGCTGCACGGATTTCGCAAGAAAAAGGATG
CATATACAGATAAATCAGGAATACCCGCACTCCCTCTATATTTCAGTCTA
CTACGTATGATTCATGCGCAATTACAGAAGTGATAATAACGATGATAACA
ACGAATTCACATTCAAAAAAGCACAGAACTTAAAGTATTCTGTTAGGAGT
GCAAAAGGCAAAGTAAGAAATGAGTAATTCGCTCACAGCTCTATTTTTTG
AAATAACATAC back to topCoding sequence (CDS) from alignment at CM002461.1:632147..635507- >rna3538 ID=rna3538|Name=rna3538|organism=Nannochloropsis gaditana|type=CDS|length=2628bp|location=Sequence derived from alignment at CM002461.1:632147..635507- (Nannochloropsis gaditana)
ATGGCCCACAGAGTAGCAGTACAGCACCAAGCACCTCTGGCGCTCTGGCA
GACAGCTCACGCGCAAGGTCAGCGCCGACTCCAGCATCACGACAACGATC
ACAAGATGGGAACCAATAGTCCTGGAGCGAGTCCTGTGGTATGCGCTGAT
ACTGCATCGCAGGATAGAGAAAAACTTTGGCATCCAATGCTTGAGTCAAC
TTCATCGACCTTAAAAGAAAACCCTGTAGAGGGAAATTTTGATAGATGGC
TCCGATTGGGAAGCAAGAAAACGAGGGCGAGTGAATCTCAATTTTGCAAG
CTTCCTCCTCCTGGTCTCCGCCACCAGACGATCACAAGCCTTTTCGATGA
GCTCTTCGCGGATAGCGATGCAGAAAAAGATGATATTGTGTCCATTGCGT
CGAAGAAATGTTGCACCTTCAGAAAGGATTCTCCAGCTGCCCTAATCAGG
ACTTCCGAGGATGGTCGCTTTGCTGTTTTGGACTCTGACAACGAAGAGGA
AAGCGAGGACGCGTTCGATCCGTGGGGCAGCAGATATCTGAGCGACGAAG
AGGATAGCGGCGACGATGACGGATCAGGCTCACGGCGTTGCAAGAAGCCT
CGTTTAGGTAGCAGAGGCACAAAGGAGGTCGGTTTGCGTAAGGCATTGCC
GTCCCAGACAGAAGTAAAACGAGCTGAGGAGCTTGACCCCACCTGGAGTA
TTTTGGCGACCCTGTCGCACTTCCTTCAACATCCAAACAGTAACATCGCC
AAAGCAGTGCAAGCGCACCTTCAGCCTTGCGAGATGATTCCACCCTACGA
TCAGGCACAAATGCTTGCCATTCAAGCGCAGGCAGCACGTTTTCTACCGA
AGCTTAAAAGAGAAGAGCGCCACCCCAAGCCCTACAAGAAAGTTCGAAGA
ATTATATTCCACGAATCCATGAAAGGCCAGGCTGATATTTTCAAGGACGA
CTCGCATGAACACCAATGTCAGTGTCTCAGTAAAGAGGAGGCCGCCATGT
TGCCTCCGCACGAATTGGAAAATCGCGGCGTGAGTTGTGACGAGAATTGT
TTAAATCGATCCTTGAACGTGGAGTGCAGCGACGGGACCTGTCGATTTGC
AGCATCTGGAGAGTGCAAAAACCAGCGCATCGGTCGAAAACAGCAAGCGG
CCTTCCGTACCTTTAAGACAGAGGGCCGCGGATGGGGAGTGCAGTCAGTG
GAGGACGTGGAGGCGGGGACTCTGGTCAGTGAGTACGTTGGGGAGGCGAT
CGACGACGAGGAAGTGGCGCGGCGCCTTTGGCTGGCAAAGCAGGAAGAAG
GCGAGGAGGCAGACTTTTATATGGTCGAAGCGATGGGAACAACAGTAGAT
GCTCGCTATTATGGCAACGAAAGTCGATTCTTGAATCACTCATGCGATCC
TAATTGCCGGTTGGAGAAATGGAATGTGGGAGGGAGTTACCGGTTGGGTA
TCTTCGCGATCAAAGATATTCCAGCAGGCACCGAATATTGCTGGGATTAT
CAATTTGCCAACTTTGAAGGAGCGCGACCTAAGCGGTGCCGATGCGGAGC
CGTCAATTGCCGCAAAGTCTTGGCGGGTAAAGCCTACCGAGACGAAGCCG
GGGGAGGGGGTGACAGTCAAGCTCCTGTATCCGACCGCCTAGAAAAGCTG
CAGCGCACGTTATCTGAGGTTCAGGCCTTCCGAGCGATGCTTGGAAATAA
GCCTTTGGATAATTTTGGGTCTCTAGTTTTGTTCTTCAATGGACGTACAG
CCCCGGAGGAGATGCATCAAGCACAGAAGTCACGACTGTGGTTGACCTAT
GACGGACCTGGCGTCGTGACACGAGAAAGGAAGAGGGCTCTGCGAGCTCG
TGAACAAAAGAGTGAAACTGTACTTGTATCGGCTCGCAGCAATTCCTGCA
CGACTCTCTTGAACGTGACAGAGGCGCTCAATGTCGATGCGAGGGCAGCA
ACAGGGACGAGGCAGGCCCATATTGCCCTGTTGCCGTGCAAGGCTTTGCA
GACGCGGCTGGAATCTATGCTTACGGTCCACTTAGACGAGAGAGAGATGG
GATGCGAGAGCAGAAGCAGTAGTACAGTGACAGAAACGACATCGGCATCG
TCCATGACAAGGAAAGAGGATAGGAAACTTACGAAAGGGGAAGCGAATGG
AATTGGCCGCGACCTTGACAAGCACGCATGGCCCCCGGCCAAGGTTCTGA
TTGAACTAACAGATTTAGCTTTGCGACGATCTAGAGAAAGAAGCACGGCT
GTCATACGCCGGAAATACCGGCTTCGCCGATTTGGTCTTCTTTCTCTGCG
AGAGATGCGCTGGCGTGAGGCCGCAGCTTTGCCCTTTGCCGTGAAGCGCG
CTGGCGCAGCGAGGGTGCAAAGTTGGCACGAAAGTCGATGGCAGGCTGTG
AGTGACATGCTCGCATTTATGAGGCAGAGCGAGTCTAAGGGCCTTTGGGG
GGACATGAGTGAGGACATCTGTTACTCATGTGGCTGCAGCGGTGACTTGG
TCTGTTGCGACGCTTGCACCAGCGCCTTTCACCTGAGCTGTGCGGGGCTG
TATGAGGTTCCTAGTGATGATACATGGTTCTGCACCCGCTGCAAGCGGAA
AGTGGGCTCCGTCAGTCGACGTCCGTAG back to top
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