EWM27230.1, cds3529 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27230.1 vs. NCBI_GenBank
Match: gi|585109410|gb|EWM27230.1| (putative histone-lysine n-methyltransferase ash1l [Nannochloropsis gaditana]) HSP 1 Score: 1818.13 bits (4708), Expect = 0.000e+0 Identity = 875/875 (100.00%), Postives = 875/875 (100.00%), Query Frame = 0
Query: 1 MAHRVAVQHQAPLALWQTAHAQGQRRLQHHDNDHKMGTNSPGASPVVCADTASQDREKLWHPMLESTSSTLKENPVEGNFDRWLRLGSKKTRASESQFCKLPPPGLRHQTITSLFDELFADSDAEKDDIVSIASKKCCTFRKDSPAALIRTSEDGRFAVLDSDNEEESEDAFDPWGSRYLSDEEDSGDDDGSGSRRCKKPRLGSRGTKEVGLRKALPSQTEVKRAEELDPTWSILATLSHFLQHPNSNIAKAVQAHLQPCEMIPPYDQAQMLAIQAQAARFLPKLKREERHPKPYKKVRRIIFHESMKGQADIFKDDSHEHQCQCLSKEEAAMLPPHELENRGVSCDENCLNRSLNVECSDGTCRFAASGECKNQRIGRKQQAAFRTFKTEGRGWGVQSVEDVEAGTLVSEYVGEAIDDEEVARRLWLAKQEEGEEADFYMVEAMGTTVDARYYGNESRFLNHSCDPNCRLEKWNVGGSYRLGIFAIKDIPAGTEYCWDYQFANFEGARPKRCRCGAVNCRKVLAGKAYRDEAGGGGDSQAPVSDRLEKLQRTLSEVQAFRAMLGNKPLDNFGSLVLFFNGRTAPEEMHQAQKSRLWLTYDGPGVVTRERKRALRAREQKSETVLVSARSNSCTTLLNVTEALNVDARAATGTRQAHIALLPCKALQTRLESMLTVHLDEREMGCESRSSSTVTETTSASSMTRKEDRKLTKGEANGIGRDLDKHAWPPAKVLIELTDLALRRSRERSTAVIRRKYRLRRFGLLSLREMRWREAAALPFAVKRAGAARVQSWHESRWQAVSDMLAFMRQSESKGLWGDMSEDICYSCGCSGDLVCCDACTSAFHLSCAGLYEVPSDDTWFCTRCKRKVGSVSRRP 875
MAHRVAVQHQAPLALWQTAHAQGQRRLQHHDNDHKMGTNSPGASPVVCADTASQDREKLWHPMLESTSSTLKENPVEGNFDRWLRLGSKKTRASESQFCKLPPPGLRHQTITSLFDELFADSDAEKDDIVSIASKKCCTFRKDSPAALIRTSEDGRFAVLDSDNEEESEDAFDPWGSRYLSDEEDSGDDDGSGSRRCKKPRLGSRGTKEVGLRKALPSQTEVKRAEELDPTWSILATLSHFLQHPNSNIAKAVQAHLQPCEMIPPYDQAQMLAIQAQAARFLPKLKREERHPKPYKKVRRIIFHESMKGQADIFKDDSHEHQCQCLSKEEAAMLPPHELENRGVSCDENCLNRSLNVECSDGTCRFAASGECKNQRIGRKQQAAFRTFKTEGRGWGVQSVEDVEAGTLVSEYVGEAIDDEEVARRLWLAKQEEGEEADFYMVEAMGTTVDARYYGNESRFLNHSCDPNCRLEKWNVGGSYRLGIFAIKDIPAGTEYCWDYQFANFEGARPKRCRCGAVNCRKVLAGKAYRDEAGGGGDSQAPVSDRLEKLQRTLSEVQAFRAMLGNKPLDNFGSLVLFFNGRTAPEEMHQAQKSRLWLTYDGPGVVTRERKRALRAREQKSETVLVSARSNSCTTLLNVTEALNVDARAATGTRQAHIALLPCKALQTRLESMLTVHLDEREMGCESRSSSTVTETTSASSMTRKEDRKLTKGEANGIGRDLDKHAWPPAKVLIELTDLALRRSRERSTAVIRRKYRLRRFGLLSLREMRWREAAALPFAVKRAGAARVQSWHESRWQAVSDMLAFMRQSESKGLWGDMSEDICYSCGCSGDLVCCDACTSAFHLSCAGLYEVPSDDTWFCTRCKRKVGSVSRRP
Sbjct: 1 MAHRVAVQHQAPLALWQTAHAQGQRRLQHHDNDHKMGTNSPGASPVVCADTASQDREKLWHPMLESTSSTLKENPVEGNFDRWLRLGSKKTRASESQFCKLPPPGLRHQTITSLFDELFADSDAEKDDIVSIASKKCCTFRKDSPAALIRTSEDGRFAVLDSDNEEESEDAFDPWGSRYLSDEEDSGDDDGSGSRRCKKPRLGSRGTKEVGLRKALPSQTEVKRAEELDPTWSILATLSHFLQHPNSNIAKAVQAHLQPCEMIPPYDQAQMLAIQAQAARFLPKLKREERHPKPYKKVRRIIFHESMKGQADIFKDDSHEHQCQCLSKEEAAMLPPHELENRGVSCDENCLNRSLNVECSDGTCRFAASGECKNQRIGRKQQAAFRTFKTEGRGWGVQSVEDVEAGTLVSEYVGEAIDDEEVARRLWLAKQEEGEEADFYMVEAMGTTVDARYYGNESRFLNHSCDPNCRLEKWNVGGSYRLGIFAIKDIPAGTEYCWDYQFANFEGARPKRCRCGAVNCRKVLAGKAYRDEAGGGGDSQAPVSDRLEKLQRTLSEVQAFRAMLGNKPLDNFGSLVLFFNGRTAPEEMHQAQKSRLWLTYDGPGVVTRERKRALRAREQKSETVLVSARSNSCTTLLNVTEALNVDARAATGTRQAHIALLPCKALQTRLESMLTVHLDEREMGCESRSSSTVTETTSASSMTRKEDRKLTKGEANGIGRDLDKHAWPPAKVLIELTDLALRRSRERSTAVIRRKYRLRRFGLLSLREMRWREAAALPFAVKRAGAARVQSWHESRWQAVSDMLAFMRQSESKGLWGDMSEDICYSCGCSGDLVCCDACTSAFHLSCAGLYEVPSDDTWFCTRCKRKVGSVSRRP 875
BLAST of EWM27230.1 vs. NCBI_GenBank
Match: gi|924443303|pdb|4YPE|A (Chain A, Ash1l Set Domain H2193f Mutant In Complex With S-adenosyl Methionine (sam) >gi|924443304|pdb|4YPE|B Chain B, Ash1l Set Domain H2193f Mutant In Complex With S-adenosyl Methionine (sam)) HSP 1 Score: 162.155 bits (409), Expect = 1.322e-41 Identity = 75/187 (40.11%), Postives = 117/187 (62.57%), Query Frame = 0
Query: 346 CDENCLNRSLNVECSDGTCRFAASGECKNQRIGRKQQA-AFRTFKTEGRGWGVQSVEDVEAGTLVSEYVGEAIDDEEVARRLWLAKQEEGEEADFYMVEA-MGTTVDARYYGNESRFLNHSCDPNCRLEKWNVGGSYRLGIFAIKDIPAGTEYCWDYQFANFEGARPKRCRCGAVNCRKVLAGKAYR 530
C ++CLNR + ECS TC +C NQRI R + F+ E +GWG+++ E ++AG + EY+GE + ++E R+ ++ +DFY + G +D+ GNE+RF+NHSCDPNC ++KW+V G YR+G++A+KD+PAGTE +DY F +F + + C+CG CR ++ GK+ R
Sbjct: 42 CVDDCLNRMIFAECSPNTC--PCGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMI---EQYHNHSDFYCLNLDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGGKSQR 223
BLAST of EWM27230.1 vs. NCBI_GenBank
Match: gi|699580866|ref|XP_009862790.1| (PREDICTED: histone-lysine N-methyltransferase ASH1L-like, partial [Apaloderma vittatum]) HSP 1 Score: 163.696 bits (413), Expect = 3.776e-41 Identity = 79/206 (38.35%), Postives = 122/206 (59.22%), Query Frame = 0
Query: 340 ENRGVSCDENCLNRSLNVECSDGTCRFAASGECKNQRIGRKQQA-AFRTFKTEGRGWGVQSVEDVEAGTLVSEYVGEAIDDEEVARRLWLAKQEEGEEADFYMVEAMGTTVDARYYGNESRFLNHSCDPNCRLEKWNVGGSYRLGIFAIKDIPAGTEYCWDYQFANFEGARPKRCRCGAVNCRKVLAGKAYRDEAGGGGDSQAPVS 544
++ G C E+CLNR + ECS TC +C NQRI R + F+ E +GWG+++ E ++AG + EY+GE + ++E R+ +Q + + G +D+ GNE+RF+NHSC+PNC ++KW+V G YR+G++A+KD+PAGTE +DY F +F + + C+CG CR ++ GK+ R G S PVS
Sbjct: 63 DDNGKGCVEDCLNRMIFAECSPNTC--PCGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRM--IEQYHNHSDHYCLNLDSGMVIDSYRMGNEARFINHSCNPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFDKCRGIIGGKSQR-MNGLSSKSNQPVS 263
BLAST of EWM27230.1 vs. NCBI_GenBank
Match: gi|528770376|gb|EPY90035.1| (hypothetical protein CB1_000057015 [Camelus ferus]) HSP 1 Score: 164.466 bits (415), Expect = 7.035e-41 Identity = 77/201 (38.31%), Postives = 120/201 (59.70%), Query Frame = 0
Query: 346 CDENCLNRSLNVECSDGTCRFAASGECKNQRIGRKQQA-AFRTFKTEGRGWGVQSVEDVEAGTLVSEYVGEAIDDEEVARRLWLAKQEEGEEADFYMVEA-MGTTVDARYYGNESRFLNHSCDPNCRLEKWNVGGSYRLGIFAIKDIPAGTEYCWDYQFANFEGARPKRCRCGAVNCRKVLAGKAYRDEAGGGGDSQAPVS 544
C ++CLNR + ECS TC +C NQRI R + F+ E +GWG+++ E ++AG + EY+GE + ++E R+ ++ +D Y + G +D+ GNE+RF+NHSCDPNC ++KW+V G YR+G++A+KD+PAGTE +DY F +F + + C+CG CR ++ GK+ R S PV+
Sbjct: 57 CVDDCLNRMIFAECSPNTC--PCGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMI---EQYHNHSDHYCLNLDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGGKSQRMNGLTSNKSSQPVA 252
BLAST of EWM27230.1 vs. NCBI_GenBank
Match: gi|924443299|pdb|4YPA|A (Chain A, Ash1l Set Domain Q2265a Mutant In Complex With S-adenosyl Methionine (sam) >gi|924443300|pdb|4YPA|B Chain B, Ash1l Set Domain Q2265a Mutant In Complex With S-adenosyl Methionine (sam) >gi|924443301|pdb|4YPA|C Chain C, Ash1l Set Domain Q2265a Mutant In Complex With S-adenosyl Methionine (sam) >gi|924443302|pdb|4YPA|D Chain D, Ash1l Set Domain Q2265a Mutant In Complex With S-adenosyl Methionine (sam)) HSP 1 Score: 158.688 bits (400), Expect = 2.170e-40 Identity = 73/186 (39.25%), Postives = 114/186 (61.29%), Query Frame = 0
Query: 346 CDENCLNRSLNVECSDGTCRFAASGECKNQRIGRKQQA-AFRTFKTEGRGWGVQSVEDVEAGTLVSEYVGEAIDDEEVARRLWLAKQEEGEEADFYMVEAMGTTVDARYYGNESRFLNHSCDPNCRLEKWNVGGSYRLGIFAIKDIPAGTEYCWDYQFANFEGARPKRCRCGAVNCRKVLAGKAYR 530
C ++CLNR + ECS TC +C NQRI R + F+ E +GWG+++ E ++AG + EY+GE + ++E R+ +Q + + G +D+ GNE+RF+NHSCDPNC ++KW+V G YR+G++A+KD+PAGTE +DY F +F + + C+CG CR ++ GK+ R
Sbjct: 42 CVDDCLNRMIFAECSPNTC--PCGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRM--IEQYHNHSDHYCLNLDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKAQLCKCGFEKCRGIIGGKSQR 223
BLAST of EWM27230.1 vs. NCBI_GenBank
Match: gi|317455359|pdb|3OPE|A (Chain A, Structural Basis Of Auto-inhibitory Mechanism Of Histone Methyltransferase >gi|317455360|pdb|3OPE|B Chain B, Structural Basis Of Auto-inhibitory Mechanism Of Histone Methyltransferase) HSP 1 Score: 158.303 bits (399), Expect = 2.486e-40 Identity = 73/186 (39.25%), Postives = 114/186 (61.29%), Query Frame = 0
Query: 346 CDENCLNRSLNVECSDGTCRFAASGECKNQRIGRKQQA-AFRTFKTEGRGWGVQSVEDVEAGTLVSEYVGEAIDDEEVARRLWLAKQEEGEEADFYMVEAMGTTVDARYYGNESRFLNHSCDPNCRLEKWNVGGSYRLGIFAIKDIPAGTEYCWDYQFANFEGARPKRCRCGAVNCRKVLAGKAYR 530
C ++CLNR + ECS TC +C NQRI R + F+ E +GWG+++ E ++AG + EY+GE + ++E R+ +Q + + G +D+ GNE+RF+NHSCDPNC ++KW+V G YR+G++A+KD+PAGTE +DY F +F + + C+CG CR ++ GK+ R
Sbjct: 38 CVDDCLNRMIFAECSPNTC--PCGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRM--IEQYHNHSDHYCLNLDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGGKSQR 219
BLAST of EWM27230.1 vs. NCBI_GenBank
Match: gi|924443293|pdb|4YNM|A (Chain A, Ash1l Wild-type Set Domain In Complex With S-adenosyl Methionine (sam) >gi|924443294|pdb|4YNM|B Chain B, Ash1l Wild-type Set Domain In Complex With S-adenosyl Methionine (sam)) HSP 1 Score: 158.303 bits (399), Expect = 2.714e-40 Identity = 73/186 (39.25%), Postives = 114/186 (61.29%), Query Frame = 0
Query: 346 CDENCLNRSLNVECSDGTCRFAASGECKNQRIGRKQQA-AFRTFKTEGRGWGVQSVEDVEAGTLVSEYVGEAIDDEEVARRLWLAKQEEGEEADFYMVEAMGTTVDARYYGNESRFLNHSCDPNCRLEKWNVGGSYRLGIFAIKDIPAGTEYCWDYQFANFEGARPKRCRCGAVNCRKVLAGKAYR 530
C ++CLNR + ECS TC +C NQRI R + F+ E +GWG+++ E ++AG + EY+GE + ++E R+ +Q + + G +D+ GNE+RF+NHSCDPNC ++KW+V G YR+G++A+KD+PAGTE +DY F +F + + C+CG CR ++ GK+ R
Sbjct: 42 CVDDCLNRMIFAECSPNTC--PCGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRM--IEQYHNHSDHYCLNLDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGGKSQR 223
BLAST of EWM27230.1 vs. NCBI_GenBank
Match: gi|924443295|pdb|4YNP|A (Chain A, Ash1l Set Domain S2259m Mutant In Complex With S-adenosyl Methionine (sam) >gi|924443296|pdb|4YNP|B Chain B, Ash1l Set Domain S2259m Mutant In Complex With S-adenosyl Methionine (sam)) HSP 1 Score: 158.303 bits (399), Expect = 3.298e-40 Identity = 73/186 (39.25%), Postives = 113/186 (60.75%), Query Frame = 0
Query: 346 CDENCLNRSLNVECSDGTCRFAASGECKNQRIGRKQQA-AFRTFKTEGRGWGVQSVEDVEAGTLVSEYVGEAIDDEEVARRLWLAKQEEGEEADFYMVEAMGTTVDARYYGNESRFLNHSCDPNCRLEKWNVGGSYRLGIFAIKDIPAGTEYCWDYQFANFEGARPKRCRCGAVNCRKVLAGKAYR 530
C ++CLNR + ECS TC +C NQRI R + F+ E +GWG+++ E ++AG + EY+GE + ++E R+ +Q + + G +D+ GNE+RF+NHSCDPNC ++KW+V G YR+G++A+KD+PAGTE +DY F F + + C+CG CR ++ GK+ R
Sbjct: 42 CVDDCLNRMIFAECSPNTC--PCGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRM--IEQYHNHSDHYCLNLDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHMFNVEKQQLCKCGFEKCRGIIGGKSQR 223
BLAST of EWM27230.1 vs. NCBI_GenBank
Match: gi|1212173735|ref|XP_021537802.1| (histone-lysine N-methyltransferase ASH1L isoform X2 [Neomonachus schauinslandi]) HSP 1 Score: 172.555 bits (436), Expect = 3.554e-40 Identity = 87/253 (34.39%), Postives = 137/253 (54.15%), Query Frame = 0
Query: 295 YKKVRRIIFHESMKGQADIFKDDSHE-HQCQCLSKEEAAMLPPHELENRGVSCDENCLNRSLNVECSDGTCRFAASGECKNQRIGRKQ-QAAFRTFKTEGRGWGVQSVEDVEAGTLVSEYVGEAIDDEEVARRLWLAKQEEGEEADFYMVEA-MGTTVDARYYGNESRFLNHSCDPNCRLEKWNVGGSYRLGIFAIKDIPAGTEYCWDYQFANFEGARPKRCRCGAVNCRKVLAGKAYRDEAGGGGDSQAPVS 544
YKK+R ++ D+ +E C C E+ + G C ++CLNR + ECS TC +C NQRI R + F+ E +GWG+++ E ++AG + EY+GE + ++E R+ ++ +D Y + G +D+ GNE+RF+NHSCDPNC ++KW+V G YR+G++A+KD+PAGTE +DY F +F + + C+CG CR ++ GK+ R S PV+
Sbjct: 2070 YKKIRSNVY-------VDVKPLSGYEATTCNCKKPED----------DTGKGCVDDCLNRMIFAECSPNTC--PCGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMI---EQYHNHSDHYCLNLDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGGKSQRVNGLTSSKSSQPVA 2300
BLAST of EWM27230.1 vs. NCBI_GenBank
Match: gi|472366925|ref|XP_004402997.1| (PREDICTED: histone-lysine N-methyltransferase ASH1L [Odobenus rosmarus divergens]) HSP 1 Score: 172.17 bits (435), Expect = 4.693e-40 Identity = 87/253 (34.39%), Postives = 137/253 (54.15%), Query Frame = 0
Query: 295 YKKVRRIIFHESMKGQADIFKDDSHE-HQCQCLSKEEAAMLPPHELENRGVSCDENCLNRSLNVECSDGTCRFAASGECKNQRIGRKQ-QAAFRTFKTEGRGWGVQSVEDVEAGTLVSEYVGEAIDDEEVARRLWLAKQEEGEEADFYMVEA-MGTTVDARYYGNESRFLNHSCDPNCRLEKWNVGGSYRLGIFAIKDIPAGTEYCWDYQFANFEGARPKRCRCGAVNCRKVLAGKAYRDEAGGGGDSQAPVS 544
YKK+R ++ D+ +E C C E+ + G C ++CLNR + ECS TC +C NQRI R + F+ E +GWG+++ E ++AG + EY+GE + ++E R+ ++ +D Y + G +D+ GNE+RF+NHSCDPNC ++KW+V G YR+G++A+KD+PAGTE +DY F +F + + C+CG CR ++ GK+ R S PV+
Sbjct: 2069 YKKIRSNVY-------VDVKPLSGYEATTCNCKKPED----------DTGKGCVDDCLNRMIFAECSPNTC--PCGEQCCNQRIQRHEWVQCLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMI---EQYHNHSDHYCLNLDSGMVIDSYRMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGGKSQRVNGLNSSKSSQPVA 2299 The following BLAST results are available for this feature:
BLAST of EWM27230.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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