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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100010g92.6188.mrna |
| Orig protein id | gnl|cribi|Naga_100010g92.6188 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:618318..619110 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3533 ID=rna3533|Name=rna3533|organism=Nannochloropsis gaditana|type=mRNA|length=2729bp
CCGCTGCTAGCTGCGCAACTCGTAGGCCCCTCGCACACTCGTTTTGAAAT
TTGTGCAGAATGCGTCCATGAGCCCGCCTGGAGCTACCACTCGGCTTTGC
GCGCCATTGCTCCGTGGATTTCATTGGTGCGTTTTGTAATGTTTTCATTT
CGCTCCGACAAGGCGATTCGCGCGCTGGACGATTCGATCATGGGATAATA
TGCCTCCGGCATGTCTCCAAAGCGAGAGAACGGACAAGCCTGACGAGTGC
AGTTTAGGGAAAAAATATAATAGCGGGCCGGAAAAGGTACCTGACGTAAA
GTTGGGGTCAAAATGAAGGATTGAGACATTTGCGATAATACTATGAATTT
TAAAAGACGTAAATGTATATTTTAAGGGGGCGAACCTCCAGGTACCCCAT
AGCCCTCCCATCCTGAAGGCCACTCGGAGCTGTCTTGGGCAGCTTCGCCA
TGACAACCCTAGTCAGCGGACTTAATGATGAGCACCAAGGCATCACCTCA
TGCATACGTGCTGTTGACGGCGTGACACTTCAGGTTGGCGACGATGTGTT
TTTCGAACGTGAGAGTGGACTTCTAGAGGAGGGCTTTGTGGAAAAACTGT
TCCCGCAAGATGACAAGGTCATGGCCCTGGTCCGCTACAAGGAGAGGGCG
TGGTCGGCCTACATTGAGCGACGTGACGTTGAGGGCCTGCTCCTCAGGGA
CCAGCTGGTGAGCAAAAGCCGAACGCGTCGTAATGCCCGTCCAGTATCTC
GTTATCAGCCTCAGGAGCAGTCCGGATCTGCGTACGGCTCACGTCAGTCC
CGCAAACCCAAGCTTCTGAAAGGTTCGCGCAAATCGCATGAGAAAAAGCG
CCGACGTCGCCGCAAGCGTTTGAAGGAGGCAGCTCGGCTACGCCGGGCGA
GAAGAGAGCGTCGTCGGACACTTGCTTTAAGGTTTCTGTCGGAAGGTTTA
GTAGACGGCGTGATACTGAGCGAGCAAGAGCGCGCAGAGCTGATGGGGCT
TCTGAGTGTGTCGGAAGCGGTGCACATCCGAGAGGCCTTGACGTTGTCGA
GTTCCGAGTCGGAGGACGACAATTTGGACCAAAGTCAGAGCTCTGAGGAT
GAGAGTGGGTCATCCTCGAGCTCTGATTCCTCGTCGACCATCTCCACGTT
TGGCGAACAGGACAGCGAGTCGGAGGCGGAGAGCGGGGCCGAGAGCGAGC
TGGGGCTCTCGGATGTGTCCACCGACTCCTGCCCCAGCGAGCCGGACTTC
TTGTATTGGTCTCGAGTTCACCAACCGGCACTTGAACAGTTGCGGGCGAC
GGGGCGAAAGCGATTTGGTTTGGCCCCCAAGTACGACTCAGAAGACTCGG
ACGACGTGGACGAGGAGCCGCGGGAGATGGGGCTGGCGAGCACGATCATG
AGCTGGACTGGGCAGGAGCGCAAAGAATTGCTGCGTGAGTATCTGAACCG
ACCGGCGTCGATTGCGCGACGACTGAAGACAGGGGCAATCTCATACAAGG
AGTGGTGTCTGGCCTTGCAGGTCGTGAGCGAGGACTCGGGCGGGGTAAGC
AGCCTGGAGAACATGAGTGCCATTAAGGGGGTGAAGCGTTGCGACGGCAT
GCGGACCATGTACGGAGCTATTCGGGCCCCACTCATACAAGAGATGATCC
GTTTCGCAGGAGTGACGAGGCAAGACCGCTTTCTGGATATTGGCTCGGGG
CTGGGTACAGTGGTCCTGCAGATGGCTGCAGTCACAGGTTGCCATGCAAC
AGGCATTGAGTTGGAGGCATCTCGCTTCACAATATCTTCGATGCTGAGCG
AGGAACTGATCCATCTGATGGCGGAACTGAGCACCAGTAGAGAGACAGGC
TTTGTGGCAGACTTGAAGAATCGCATCGAGATGAAAAATGAAGACGTTCG
GGACCACGAGGAGACCATCTTACAGTCAACCGTCATCTACTTTAACAACC
ACGGGGTCTGGTTCGATGAAACTTCCTCCAAACAGGGCGAAATATCAGTG
GAACATTGGGTTGCAAAGCTTTTCGCCAGGACGGCCGTAGGCACGCGCCT
TGTCATTTTAAAAAGCATCCCTCACCTGAAGGGCAACTGGTTTTCCGAGC
AAATGTACATGGCTCGCTCAGACTGGTTGACCTGGGCCCGGGATGCCAAG
CCTCTCTTCTGCTACACGAAGCTAAAAGACACGTGGACGTGTGAGAAGTG
TCAGCACGAGAACGCGATCGTAGGCGATGACGACTCGCTCATCTGGGAGA
TGAGATGTGTCAATAGCTGCGCCTCTCGCGCACATCGCCTCCGTGCCCGT
CCGGGGCAGCCGTCCGAGTGAAAGATTGCACGCGGTGAGAGCATGTCCGT
ATCGTGATGGCACTTGCGATGTCCTTATGTGTAGGCTTTCGAAAGAGTCC
CCGCGGTGTACGGTGGAAATCATGTGGCAGCAGGCACGTGGCCACGTGTC
TAGGACTTTTACAGTAAAAGTATAACAATGGAAAAACTTAAAATTGATTT
ACTATAGCATCTTTCAGGTGATAGTAGAAATCAAGAACGGTGACACTTGA
AACAGGTGTACGTGTCGCCATAAGCGAACGTCTTTTTTTAAATGTTTTTT
TCTGACTTTGTGTAGCCATTTCCCACACAACCGTCCGATCTTCGCCGCAT
GTTCTAGAGCAAAATCTGAGTGTTCTAGAGCAAAATCTGACAAGTCTATC
AGGGAGACCACTTGTATAAGGCTTTTCCG back to topprotein sequence of rna3533 >rna3533-protein ID=rna3533-protein|Name=rna3533|organism=Nannochloropsis gaditana|type=polypeptide|length=204bp
MSSVVVSGEQQQTQSTATGDGNNFLGESTASQIIASDTPGTPTGQSLARG
SAIDSRIFSTATISNEEELQARADIYQISHRLQNTGDILILVYITLKCLV
LLRHARGCGHILACMYRPDYLEYGRPATSEELQEAETFECIVGYENLNNN
SVALPGAHYFCEPCLSEWCERERTCPLCRSAIGPNFHLNAPYCNITTPIW
PCFL back to topmRNA from alignment at CM002461.1:618318..619110+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3533 ID=rna3533|Name=rna3533|organism=Nannochloropsis gaditana|type=mRNA|length=793bp|location=Sequence derived from alignment at CM002461.1:618318..619110+ (Nannochloropsis gaditana)
GCCATGTCAATTTCGCCATAAAGGATGGTCATTGAATCGCCTTTCGAATA
ATTTCCTACAGGAAGATGTCCAGTGTCGTTGTGAGCGGAGAACAGCAACA
AACTCAATCAACAGCGACAGGAGATGGGAACAATTTTCTTGGAGAATCCA
CAGCATCGCAAATAATAGCATCAGATACGCCAGGAACTCCTACAGGGCAA
TCTCTAGCACGCGGAAGTGCGATAGATTCAAGGATATTCTCGACCGCCAC
CATTTCAAATGAAGAAGAGCTTCAAGCCCGTGCCGACATTTATCAAATAT
CACATCGCCTGCAAAACACTGGAGACATTTTGATACTGGTCTATATCACG
CTGAAATGCTTGGTGCTTTTGCGCCATGCCCGTGGTTGCGGTCACATTTT
GGCCTGCATGTATCGTCCTGATTACTTAGAATACGGTAGGCCTGCAACGA
GCGAAGAGCTTCAGGAAGCAGAAACATTTGAATGCATTGTGGGCTATGAA
AATCTGAACAACAACTCCGTTGCTCTCCCTGGTGCGCATTATTTTTGCGA
GCCATGCTTGTCTGAGTGGTGCGAACGGGAGCGTACATGCCCGCTTTGTC
GAAGCGCTATAGGGCCGAATTTCCACTTAAACGCACCATATTGCAACATC
ACTACCCCGATCTGGCCATGCTTTCTTTGAAAGGAAGTGGTCTGTTATCA
ACGGGCATGCCTTGAGACAACTAGAAATTGGATTTTAAGGGTATTTTCAA
CGCTGTGCGAAAAGGGCCAGAAGAATATTTCAATTTTCCATTT back to topCoding sequence (CDS) from alignment at CM002461.1:618318..619110+ >rna3533 ID=rna3533|Name=rna3533|organism=Nannochloropsis gaditana|type=CDS|length=615bp|location=Sequence derived from alignment at CM002461.1:618318..619110+ (Nannochloropsis gaditana)
ATGTCCAGTGTCGTTGTGAGCGGAGAACAGCAACAAACTCAATCAACAGC
GACAGGAGATGGGAACAATTTTCTTGGAGAATCCACAGCATCGCAAATAA
TAGCATCAGATACGCCAGGAACTCCTACAGGGCAATCTCTAGCACGCGGA
AGTGCGATAGATTCAAGGATATTCTCGACCGCCACCATTTCAAATGAAGA
AGAGCTTCAAGCCCGTGCCGACATTTATCAAATATCACATCGCCTGCAAA
ACACTGGAGACATTTTGATACTGGTCTATATCACGCTGAAATGCTTGGTG
CTTTTGCGCCATGCCCGTGGTTGCGGTCACATTTTGGCCTGCATGTATCG
TCCTGATTACTTAGAATACGGTAGGCCTGCAACGAGCGAAGAGCTTCAGG
AAGCAGAAACATTTGAATGCATTGTGGGCTATGAAAATCTGAACAACAAC
TCCGTTGCTCTCCCTGGTGCGCATTATTTTTGCGAGCCATGCTTGTCTGA
GTGGTGCGAACGGGAGCGTACATGCCCGCTTTGTCGAAGCGCTATAGGGC
CGAATTTCCACTTAAACGCACCATATTGCAACATCACTACCCCGATCTGG
CCATGCTTTCTTTGA back to top
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