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Properties
| Property Name | Value |
|---|
| Product | Armadillo-like helical |
| Orig transcript id | gnl|cribi|Naga_100010g83.6193.mrna |
| Orig protein id | gnl|cribi|Naga_100010g83.6193 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:605248..607219 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3525 ID=rna3525|Name=rna3525|organism=Nannochloropsis gaditana|type=mRNA|length=396bp
ATGTGCTCTTACAGACTTGTACAGCGAGAAGAACTGGTTACCTGTGCAAC
CATTAACCGAGGTCATGACCTGGACATAGGCTCCATCGCCAGGAGTTTGG
AGAGGCCCCGCGCTAGCGATTCACACACGCCACGTGGACGAGCATTGCTG
GAAACTTTGAAGTCTGTAATGGAGTATTTTGACCATATAGGATCACCTCC
GAAGCCCGAGTGCTATGTGTACCCCCCGCCCATACAATGCTACGGGAAGG
ATACTTGCGTACCCTTCTACAGCAAATTTTGTCACCTTATCTTATCGAAG
CTCCTAATGAAACGCTTGACCAACCGGTTTTTGTTCTTCGCACAAGGTCA
CTTCTTAAAACAAAAGTGCTTTGATGTGTCCTGGCCGCCGAGATAG back to topprotein sequence of rna3525 >rna3525-protein ID=rna3525-protein|Name=rna3525|organism=Nannochloropsis gaditana|type=polypeptide|length=474bp
MNDKNHNSAFLGTNSFEQSESLCRGVLDPEAEFDIEELGPATRSIGVSSG
PTPVQTLPSHYNRHQGAYLYRDGVGTGGNDGDGDKHVECTPPLTIPFMPQ
KQHQRADYLLSSKLRSNDAVDMIPAKLVAPNLPFETSLFPLERCHYYTNK
PTPELFSDIQVALKEKAVVFKFVPGKFKFSCEYRTGVNNVRFVCRAYFVP
EDGRTVVEFQRRSGCCIVCAKVVDAVRSTLLARECNSEALPISIRPFKPK
PLAASACLVQEEGESSAKVERARQEAQQCKLMRDLQDCLAQGRDDVLTDF
AKVLIPLSQLAPEHLLGQPSHAELLAALGRHEIQSTRLSALVCLANLAAA
CFPQSGEGLSSVPFLRRGVSTDTEDDNPDVETGEEPAPSAGDVCAWFEDV
LETIINALQSKFGPRSDAHVRREAARALWHLSKESFARTAAARQVLESCV
SGDAEEDHVLQEYVRGALEHMQFC back to topmRNA from alignment at CM002461.1:605248..607219- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3525 ID=rna3525|Name=rna3525|organism=Nannochloropsis gaditana|type=mRNA|length=1972bp|location=Sequence derived from alignment at CM002461.1:605248..607219- (Nannochloropsis gaditana)
AGGAACTTTCCCAAAGAAACTTCTTAGAAACAATGTGGCAGATGCCAGTT
TGGTCACTTACGGTACCCGAGTATTCCTGCTTCCATGGAGTGCGGAGAAT
CATTTGAATTCTACTTGAAAAGCTGTTAACTTCGCGTATGACAGATTTGT
CAGAGAATTGAGGTCATTAATTTCTCCGTTTCCAAGGCAAGAGGCGACGA
AATCTCACACTGGATGAGCCGGGAGATCAGTTTCATCAGTAAATTTACGG
ACCTACTCGAAAACATTACAACAAAACAGCGTAAAAATGAATGATAAGAA
TCACAACTCGGCATTTCTAGGCACTAACTCCTTTGAGCAGAGCGAAAGTC
TCTGCCGGGGTGTGCTCGACCCAGAAGCTGAATTTGACATCGAGGAACTT
GGCCCTGCCACACGCTCTATTGGGGTCTCCAGTGGCCCGACCCCGGTACA
AACCCTACCAAGCCATTACAATCGTCACCAGGGCGCCTATTTGTACAGGG
ACGGGGTTGGTACTGGCGGGAACGACGGGGACGGAGACAAGCATGTTGAG
TGTACGCCACCTTTGACCATCCCTTTCATGCCTCAGAAGCAGCATCAACG
GGCCGATTACTTGCTATCCTCAAAACTGCGGTCTAACGATGCGGTCGATA
TGATTCCTGCAAAGCTTGTTGCGCCAAATCTGCCTTTTGAAACGTCACTG
TTCCCTCTCGAAAGGTGTCACTACTACACAAATAAGCCTACTCCTGAATT
GTTTTCTGATATTCAGGTGGCACTCAAGGAGAAAGCCGTTGTATTCAAAT
TTGTACCTGGTAAATTTAAATTCAGTTGCGAGTATCGGACCGGTGTAAAT
AATGTACGCTTTGTTTGCCGGGCATACTTTGTTCCTGAGGATGGTCGCAC
GGTGGTAGAGTTTCAGAGACGTTCGGGCTGCTGCATTGTGTGCGCCAAAG
TAGTGGATGCGGTGCGCTCTACTCTGCTCGCTCGTGAATGCAATTCTGAG
GCATTACCGATTTCCATAAGGCCTTTCAAGCCCAAGCCCTTGGCTGCGTC
TGCCTGTCTGGTCCAGGAGGAAGGTGAGTCAAGCGCAAAGGTTGAGCGCG
CTCGCCAGGAGGCCCAGCAGTGCAAGCTCATGCGAGACCTGCAGGACTGC
CTTGCTCAAGGCAGAGATGACGTTTTGACAGATTTTGCGAAGGTTTTAAT
TCCACTTTCTCAGCTTGCACCGGAGCATTTACTGGGTCAGCCAAGCCATG
CCGAGCTGTTGGCAGCTCTGGGACGGCATGAGATTCAAAGCACCCGCCTG
AGCGCGCTAGTTTGTTTAGCCAACCTCGCAGCAGCTTGCTTCCCGCAATC
TGGAGAAGGATTATCGAGTGTTCCCTTCCTGCGGCGAGGTGTGAGCACAG
ACACAGAGGATGATAACCCGGATGTGGAGACCGGAGAGGAGCCGGCGCCA
AGCGCGGGCGATGTATGTGCTTGGTTCGAGGACGTGCTCGAAACAATAAT
TAACGCACTACAGTCTAAATTTGGCCCCCGTTCGGATGCGCATGTTCGTC
GAGAGGCCGCTCGTGCCCTGTGGCACCTGTCTAAAGAGTCCTTTGCTCGC
ACCGCAGCCGCACGACAGGTTTTGGAATCATGTGTTTCTGGGGATGCAGA
GGAAGACCACGTCCTTCAAGAGTATGTCCGTGGGGCCTTGGAGCACATGC
AGTTTTGCTGAATACAAGAAAAGGTGATAGCAACGCGGGATGGTCAACAA
ATATCTTAGATCCCCTGTACAAACCATTGGACGAAGAGTGGAGATCCCTG
CATCGATTTTCTGTGGTATTAGCAGTACTTCATGTTTTATGTACACTTTC
TTCTAGATTGACGATGTTATTCTGATAAAGATTTGCGAAATTAAGGGAGC
GAACGGGAAGTAAACCATCTTGCGACTGATGGGTAAATTTTCGAATAGAA
ATATCCAACTAAGGATGAAACA back to topCoding sequence (CDS) from alignment at CM002461.1:605248..607219- >rna3525 ID=rna3525|Name=rna3525|organism=Nannochloropsis gaditana|type=CDS|length=1425bp|location=Sequence derived from alignment at CM002461.1:605248..607219- (Nannochloropsis gaditana)
ATGAATGATAAGAATCACAACTCGGCATTTCTAGGCACTAACTCCTTTGA
GCAGAGCGAAAGTCTCTGCCGGGGTGTGCTCGACCCAGAAGCTGAATTTG
ACATCGAGGAACTTGGCCCTGCCACACGCTCTATTGGGGTCTCCAGTGGC
CCGACCCCGGTACAAACCCTACCAAGCCATTACAATCGTCACCAGGGCGC
CTATTTGTACAGGGACGGGGTTGGTACTGGCGGGAACGACGGGGACGGAG
ACAAGCATGTTGAGTGTACGCCACCTTTGACCATCCCTTTCATGCCTCAG
AAGCAGCATCAACGGGCCGATTACTTGCTATCCTCAAAACTGCGGTCTAA
CGATGCGGTCGATATGATTCCTGCAAAGCTTGTTGCGCCAAATCTGCCTT
TTGAAACGTCACTGTTCCCTCTCGAAAGGTGTCACTACTACACAAATAAG
CCTACTCCTGAATTGTTTTCTGATATTCAGGTGGCACTCAAGGAGAAAGC
CGTTGTATTCAAATTTGTACCTGGTAAATTTAAATTCAGTTGCGAGTATC
GGACCGGTGTAAATAATGTACGCTTTGTTTGCCGGGCATACTTTGTTCCT
GAGGATGGTCGCACGGTGGTAGAGTTTCAGAGACGTTCGGGCTGCTGCAT
TGTGTGCGCCAAAGTAGTGGATGCGGTGCGCTCTACTCTGCTCGCTCGTG
AATGCAATTCTGAGGCATTACCGATTTCCATAAGGCCTTTCAAGCCCAAG
CCCTTGGCTGCGTCTGCCTGTCTGGTCCAGGAGGAAGGTGAGTCAAGCGC
AAAGGTTGAGCGCGCTCGCCAGGAGGCCCAGCAGTGCAAGCTCATGCGAG
ACCTGCAGGACTGCCTTGCTCAAGGCAGAGATGACGTTTTGACAGATTTT
GCGAAGGTTTTAATTCCACTTTCTCAGCTTGCACCGGAGCATTTACTGGG
TCAGCCAAGCCATGCCGAGCTGTTGGCAGCTCTGGGACGGCATGAGATTC
AAAGCACCCGCCTGAGCGCGCTAGTTTGTTTAGCCAACCTCGCAGCAGCT
TGCTTCCCGCAATCTGGAGAAGGATTATCGAGTGTTCCCTTCCTGCGGCG
AGGTGTGAGCACAGACACAGAGGATGATAACCCGGATGTGGAGACCGGAG
AGGAGCCGGCGCCAAGCGCGGGCGATGTATGTGCTTGGTTCGAGGACGTG
CTCGAAACAATAATTAACGCACTACAGTCTAAATTTGGCCCCCGTTCGGA
TGCGCATGTTCGTCGAGAGGCCGCTCGTGCCCTGTGGCACCTGTCTAAAG
AGTCCTTTGCTCGCACCGCAGCCGCACGACAGGTTTTGGAATCATGTGTT
TCTGGGGATGCAGAGGAAGACCACGTCCTTCAAGAGTATGTCCGTGGGGC
CTTGGAGCACATGCAGTTTTGCTGA back to top
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