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Properties
| Property Name | Value |
|---|
| Product | Cystinosin/ERS1p repeat containing protein |
| Orig transcript id | gnl|cribi|Naga_100003g144.1763.mrna |
| Orig protein id | gnl|cribi|Naga_100003g144.1763 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:859923..861202 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna352 ID=rna352|Name=rna352|organism=Nannochloropsis gaditana|type=mRNA|length=465bp
ATGACAGCCTATCCCGTTTTGATGTATTACATTATTGCCCGCTTCGCTTC
GCGAGTTTTTCAGATAGGTTGGACTATTTGTCTGTTCATGATTCTTGAGT
TTGTCTTTGCTGCGTTGTTTGGGTACAGCGGTGTCTTCTCTGTCCTACAA
CTTCTGGTGGATTGTGCCGTCACAAATGACTGGGGAGGGATCAACGGCAA
TGCCCTCAAGTTTTATCTTGGTTTATTTTCCATTGCTTTCGACCTGCTTT
TCATGATACAGCACTTCGTTCTGTATCCGACGTCTGCAACTGCAGTAACG
CCGTCGAAATGGAAAATCACTTTTGTTGGGGCTGTACACAAATTGTACCA
TAGGTTGATGCGAGAAGGTCAAAATGCTTACACTCTAAGAATTAGCAAAA
AATTATCAACAACCCGAACAGAAATAATAATAAGATTTAAGGCTTCAGCT
TTTCAGGAGTCGTGA back to topprotein sequence of rna352 >rna352-protein ID=rna352-protein|Name=rna352|organism=Nannochloropsis gaditana|type=polypeptide|length=340bp
MRRLNYLSSFRGDPNAASLRLIAFSSFSIYHSAAICVNCQARPSTDTWCL
KTEGMHVPLLHGKRDGAEVATNLYNRIDEKVDHSDTQEGADCINAQVPRQ
NDRGLRMLQKASREVVAFLVLIMAGIVMGLALPRNKELRNEGYATLSNIL
GWIYFLAWTVSFYPQIFLNWRQRNTEGLSLGFELLNLLGFLFYSVYALSF
FLLPQIQEAYRKRHNGHENKVTIQDVVFACHATILTALTVAQMLHYDGIR
IYRRLSWPILMVLTGLLVITCVALVVVSARGDGPSDWLLYLYTISFMKLF
VSVIKGVPQAFLNYRRKSTVGWSIHNVLCDFTGTQEIMTG back to topmRNA from alignment at CM002455.1:859923..861202- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna352 ID=rna352|Name=rna352|organism=Nannochloropsis gaditana|type=mRNA|length=1280bp|location=Sequence derived from alignment at CM002455.1:859923..861202- (Nannochloropsis gaditana)
ATGCGTCGGCTAAACTATTTATCCTCCTTCAGAGGTGACCCAAACGCTGC
CTCGCTCCGTCTGATAGCTTTTTCAAGTTTCTCAATCTACCATTCGGTTA
GAGCTCGGCAAGTTTTGGCCCCTAAGTTTGCTTGCCGCTTGCATTTAAAG
TACTTTTATAGTACTGCTCCGACTTCGAGCAAGCCAACATTTCAGGATAT
GCTGCGGCACTGAGTGACTCCCTCACTTTGCAATGATAACTTCGATGCCA
ATGTTATATGAAGTTGTACCAACTCAAATGCGAGAATGAATTGTTGCCAG
GCTGCCATGACCTTCTGATGAGATTTTCATATTTTCCCACTCATCTGTAA
CAGGCAGCCATATGTGTCAATTGTCAGGCAAGGCCCAGCACTGATACGTG
GTGCTTAAAAACCGAGGGCATGCACGTACCGCTGCTCCATGGCAAACGAG
ATGGGGCGGAAGTTGCCACTAACCTTTACAATAGAATCGATGAGAAAGTC
GACCACAGTGACACTCAAGAAGGCGCTGACTGCATTAATGCTCAAGTGCC
ACGTCAAAACGATCGCGGCCTTCGTATGCTCCAAAAGGCGTCAAGAGAGG
TTGTAGCCTTTCTTGTGCTAATCATGGCAGGCATCGTTATGGGTCTAGCA
TTGCCGAGAAACAAAGAGCTCCGTAACGAGGGCTACGCCACGCTTTCAAA
TATATTAGGATGGATTTATTTTTTGGCCTGGACAGTTTCATTTTACCCGC
AAATTTTTCTCAATTGGAGGCAACGGAATACAGAAGGACTGTCTCTTGGC
TTTGAGCTTCTCAACCTCCTAGGGTTTCTCTTTTACAGCGTATATGCGCT
TTCTTTCTTCTTGCTCCCACAGATTCAAGAAGCATACAGAAAACGACATA
ACGGACACGAGAACAAGGTGACAATTCAAGACGTGGTCTTCGCATGTCAT
GCTACAATTCTTACTGCTTTGACAGTCGCCCAAATGCTTCACTATGATGG
CATAAGAATCTATCGGCGACTCTCGTGGCCTATCTTAATGGTCCTGACAG
GATTGCTGGTCATTACTTGTGTAGCTTTAGTGGTAGTAAGTGCGAGAGGA
GATGGGCCCTCTGATTGGCTGCTTTATTTATATACCATATCCTTCATGAA
GCTATTTGTAAGTGTCATCAAAGGCGTGCCCCAGGCCTTTTTAAATTATC
GGCGTAAGTCCACTGTAGGATGGTCGATTCACAATGTACTTTGCGACTTT
ACAGGTACGCAGGAAATTATGACGGGTTGA back to topCoding sequence (CDS) from alignment at CM002455.1:859923..861202- >rna352 ID=rna352|Name=rna352|organism=Nannochloropsis gaditana|type=CDS|length=2046bp|location=Sequence derived from alignment at CM002455.1:859923..861202- (Nannochloropsis gaditana)
GCAGCCATATGTGTCAATTGTCAGGCAAGGCCCAGCACTGATACGTGGTG
CTTAAAAACCGAGGGCATGCACGTACCGCTGCTCCATGGCAAACGAGATG
GGGCGGAAGTTGCCACTAACCTTTACAATAGAATCGATGAGAAAGTCGAC
CACAGTGACACTCAAGAAGGCGCTGACTGCATTAATGCTCAAGTGCCACG
TCAAAACGATCGCGGCCTTCGTATGCTCCAAAAGGCGTCAAGAGAGGTTG
TAGCCTTTCTTGTGCTAATCATGGCAGGCATCGTTATGGGTCTAGCATTG
CCGAGAAACAAAGAGCTCCGTAACGAGGGCTACGCCACGCTTTCAAATAT
ATTAGGATGGATTTATTTTTTGGCCTGGACAGTTTCATTTTACCCGCAAA
TTTTTCTCAATTGGAGGCAACGGAATACAGAAGGACTGTCTCTTGGCTTT
GAGCTTCTCAACCTCCTAGGGTTTCTCTTTTACAGCGTATATGCGCTTTC
TTTCTTCTTGCTCCCACAGATTCAAGAAGCATACAGAAAACGACATAACG
GACACGAGAACAAGGTGACAATTCAAGACGTGGTCTTCGCATGTCATGCT
ACAATTCTTACTGCTTTGACAGTCGCCCAAATGCTTCACTATGATGGCAT
AAGAATCTATCGGCGACTCTCGTGGCCTATCTTAATGGTCCTGACAGGAT
TGCTGGTCATTACTTGTGTAGCTTTAGTGGTAGTAAGTGCGAGAGGAGAT
GGGCCCTCTGATTGGCTGCTTTATTTATATACCATATCCTTCATGAAGCT
ATTTGTAAGTGTCATCAAAGGCGTGCCCCAGGCCTTTTTAAATTATCGGC
GTAAGTCCACTGTAGGATGGTCGATTCACAATGTACTTTGCGACTTTACA
GGTACGCAGGAAATTATGACGGGTTGAATGCGTCGGCTAAACTATTTATC
CTCCTTCAGAGGTGACCCAAACGCTGCCTCGCTCCGTCTGATAGCTTTTT
CAAGTTTCTCAATCTACCATTCGGCAGCCATATGTGTCAATTGTCAGGCA
AGGCCCAGCACTGATACGTGGTGCTTAAAAACCGAGGGCATGCACGTACC
GCTGCTCCATGGCAAACGAGATGGGGCGGAAGTTGCCACTAACCTTTACA
ATAGAATCGATGAGAAAGTCGACCACAGTGACACTCAAGAAGGCGCTGAC
TGCATTAATGCTCAAGTGCCACGTCAAAACGATCGCGGCCTTCGTATGCT
CCAAAAGGCGTCAAGAGAGGTTGTAGCCTTTCTTGTGCTAATCATGGCAG
GCATCGTTATGGGTCTAGCATTGCCGAGAAACAAAGAGCTCCGTAACGAG
GGCTACGCCACGCTTTCAAATATATTAGGATGGATTTATTTTTTGGCCTG
GACAGTTTCATTTTACCCGCAAATTTTTCTCAATTGGAGGCAACGGAATA
CAGAAGGACTGTCTCTTGGCTTTGAGCTTCTCAACCTCCTAGGGTTTCTC
TTTTACAGCGTATATGCGCTTTCTTTCTTCTTGCTCCCACAGATTCAAGA
AGCATACAGAAAACGACATAACGGACACGAGAACAAGGTGACAATTCAAG
ACGTGGTCTTCGCATGTCATGCTACAATTCTTACTGCTTTGACAGTCGCC
CAAATGCTTCACTATGATGGCATAAGAATCTATCGGCGACTCTCGTGGCC
TATCTTAATGGTCCTGACAGGATTGCTGGTCATTACTTGTGTAGCTTTAG
TGGTAGTAAGTGCGAGAGGAGATGGGCCCTCTGATTGGCTGCTTTATTTA
TATACCATATCCTTCATGAAGCTATTTGTAAGTGTCATCAAAGGCGTGCC
CCAGGCCTTTTTAAATTATCGGCGTAAGTCCACTGTAGGATGGTCGATTC
ACAATGTACTTTGCGACTTTACAGGTACGCAGGAAATTATGACGGGTTGA
ATGCGTCGGCTAAACTATTTATCCTCCTTCAGAGGTGACCCAAACGCTGC
CTCGCTCCGTCTGATAGCTTTTTCAAGTTTCTCAATCTACCATTCG back to top
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