EWM30246.1, cds352 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30246.1 vs. NCBI_GenBank
Match: gi|585112905|gb|EWM30246.1| (Cystinosin/ERS1p repeat containing protein [Nannochloropsis gaditana]) HSP 1 Score: 707.597 bits (1825), Expect = 0.000e+0 Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0
Query: 1 MRRLNYLSSFRGDPNAASLRLIAFSSFSIYHSAAICVNCQARPSTDTWCLKTEGMHVPLLHGKRDGAEVATNLYNRIDEKVDHSDTQEGADCINAQVPRQNDRGLRMLQKASREVVAFLVLIMAGIVMGLALPRNKELRNEGYATLSNILGWIYFLAWTVSFYPQIFLNWRQRNTEGLSLGFELLNLLGFLFYSVYALSFFLLPQIQEAYRKRHNGHENKVTIQDVVFACHATILTALTVAQMLHYDGIRIYRRLSWPILMVLTGLLVITCVALVVVSARGDGPSDWLLYLYTISFMKLFVSVIKGVPQAFLNYRRKSTVGWSIHNVLCDFTGTQEIMTG 340
MRRLNYLSSFRGDPNAASLRLIAFSSFSIYHSAAICVNCQARPSTDTWCLKTEGMHVPLLHGKRDGAEVATNLYNRIDEKVDHSDTQEGADCINAQVPRQNDRGLRMLQKASREVVAFLVLIMAGIVMGLALPRNKELRNEGYATLSNILGWIYFLAWTVSFYPQIFLNWRQRNTEGLSLGFELLNLLGFLFYSVYALSFFLLPQIQEAYRKRHNGHENKVTIQDVVFACHATILTALTVAQMLHYDGIRIYRRLSWPILMVLTGLLVITCVALVVVSARGDGPSDWLLYLYTISFMKLFVSVIKGVPQAFLNYRRKSTVGWSIHNVLCDFTGTQEIMTG
Sbjct: 1 MRRLNYLSSFRGDPNAASLRLIAFSSFSIYHSAAICVNCQARPSTDTWCLKTEGMHVPLLHGKRDGAEVATNLYNRIDEKVDHSDTQEGADCINAQVPRQNDRGLRMLQKASREVVAFLVLIMAGIVMGLALPRNKELRNEGYATLSNILGWIYFLAWTVSFYPQIFLNWRQRNTEGLSLGFELLNLLGFLFYSVYALSFFLLPQIQEAYRKRHNGHENKVTIQDVVFACHATILTALTVAQMLHYDGIRIYRRLSWPILMVLTGLLVITCVALVVVSARGDGPSDWLLYLYTISFMKLFVSVIKGVPQAFLNYRRKSTVGWSIHNVLCDFTGTQEIMTG 340
BLAST of EWM30246.1 vs. NCBI_GenBank
Match: gi|1032647147|gb|OAQ28449.1| (lysosomal cystine transporter [Mortierella elongata AG-77]) HSP 1 Score: 183.726 bits (465), Expect = 4.439e-52 Identity = 93/190 (48.95%), Postives = 128/190 (67.37%), Query Frame = 0
Query: 146 LSNILGWIYFLAWTVSFYPQIFLNWRQRNTEGLSLGFELLNLLGFLFYSVYALSFFLLPQIQEAYRKRHNGHENKVTIQDVVFACHATILTALTVAQMLHYDGIRIYRRLSWPILMVLTGLLVI--TCVALVVVSARGDGPSDWLLYLYTISFMKLFVSVIKGVPQAFLNYRRKSTVGWSIHNVLCDFTG 333
LS+++GW YF+AW+ SFYPQ LNWR+++ +GLS+ F LN+LGFL YS++ LSF+ P++QE YRKR++G +N V DV FA HA IL++ T+ Q L IY+R + T LL++ T A +V A G S W+ LY +S++KL +S IK PQ +LNY +STVGWSIHN+L DFTG
Sbjct: 13 LSHVIGWAYFIAWSASFYPQAILNWRRKSVQGLSMDFIYLNVLGFLCYSIFNLSFYYSPEVQEEYRKRNDGQDNLVRANDVFFAVHALILSSFTLFQTL------IYKRDEGQKVSSPTKLLILISTFGASIVFGAAYAGTSQWIDVLYYLSYIKLGISFIKYCPQVYLNYASQSTVGWSIHNILLDFTG 196
BLAST of EWM30246.1 vs. NCBI_GenBank
Match: gi|646285090|gb|KDQ07029.1| (hypothetical protein BOTBODRAFT_39178 [Botryobasidium botryosum FD-172 SS1]) HSP 1 Score: 181.415 bits (459), Expect = 1.303e-51 Identity = 92/193 (47.67%), Postives = 127/193 (65.80%), Query Frame = 0
Query: 141 EGYATLSNILGWIYFLAWTVSFYPQIFLNWRQRNTEGLSLGFELLNLLGFLFYSVYALSFFLLPQIQEAYRKRHNGHENKVTIQDVVFACHATILTALTVAQMLHYDGIRIYRRLSWPILMVLTGLLVITCVALVVVSARGDGPSDWLLYLYTISFMKLFVSVIKGVPQAFLNYRRKSTVGWSIHNVLCDFTG 333
Y LS ++GW YF AW+VSFYPQ+ LNWR+++ EGLS+ F LN LG L Y++Y +F+ P ++ YR RH GHEN V DV FA HA ++++ T+AQ Y R ++LS+ +LT + V LV++S+ G + ++ LY +S KL+VS K VPQA+LNY+RKSTVGWSI N+L DFTG
Sbjct: 4 NAYQVLSQVIGWTYFTAWSVSFYPQVILNWRRKSVEGLSIDFATLNTLGHLSYAIYNFNFYFNPTVRREYRNRHQGHENSVQPNDVAFAVHAFLISSFTLAQTFWYPRGR-NQQLSYYNTYLLTVVFAALLVNLVMLSS---GQTLFIDLLYNLSSFKLYVSFAKYVPQAWLNYKRKSTVGWSIENILLDFTG 192
BLAST of EWM30246.1 vs. NCBI_GenBank
Match: gi|661185346|emb|CDH52525.1| (lysosomal cystine transporter family [Lichtheimia corymbifera JMRC:FSU:9682]) HSP 1 Score: 174.481 bits (441), Expect = 6.320e-49 Identity = 85/188 (45.21%), Postives = 130/188 (69.15%), Query Frame = 0
Query: 146 LSNILGWIYFLAWTVSFYPQIFLNWRQRNTEGLSLGFELLNLLGFLFYSVYALSFFLLPQIQEAYRKRHNGHENKVTIQDVVFACHATILTALTVAQMLHYDGIRIYRRLSWPILMVLTGLLVITCVALVVVSARGDGPSDWLLYLYTISFMKLFVSVIKGVPQAFLNYRRKSTVGWSIHNVLCDFTG 333
+S+I+GW+YFLAW++SFYPQ LN+R+++ +GLS+ F N+LGF YSV+ LSFFL +IQ+ YR+R+NG N V DV FA HA ++++ T+ Q Y +R+S P +++ +V + + V + + W+ +Y +S++KL +S+IK +PQA++N+RRKSTVGWSIHN+L DFTG
Sbjct: 18 ISDIIGWVYFLAWSISFYPQAILNYRRKSVQGLSMDFLYFNVLGFFCYSVFNLSFFLSKEIQDEYRERNNGQNNLVRTNDVFFAVHAFLISSFTLTQTFMYTKDE-NQRISSPAKLLICASIVGAFLFTLAVEFQF---AMWIDLMYYLSYVKLLISIIKYLPQAWINFRRKSTVGWSIHNILLDFTG 201
BLAST of EWM30246.1 vs. NCBI_GenBank
Match: gi|1173938209|gb|OQR88587.1| (Lysosomal Cystine Transporter (LCT) Family, partial [Achlya hypogyna]) HSP 1 Score: 173.326 bits (438), Expect = 2.935e-48 Identity = 92/216 (42.59%), Postives = 134/216 (62.04%), Query Frame = 0
Query: 120 VLIMAGIVMGLALPRNKELRNEGYATLSNILGWIYFLAWTVSFYPQIFLNWRQRNTEGLSLGFELLNLLGFLFYSVYALSFFLLPQIQEAYRKRHNGHENKVTIQDVVFACHATILTALTVAQMLHYDGIRIYRRLSWPILMVLTGLLVITCVALVVVSARGDGPSDW--LLYLYTISFMKLFVSVIKGVPQAFLNYRRKSTVGWSIHNVLCDFTG 333
V+ + G +G L N + Y +S++LGWIYF W+VSF+PQIFLNWR +N EGLS+ F + N++GF Y+VY SFF +Q+ Y+ +HNG N V + DV F HA +TALT Q Y R R++S + L L ++ A ++V S + L +LY +S++KL +S++K VPQ +LNY RKST+GW+I+N+L DF+G
Sbjct: 13 VIAIVGFGLGFGLDANDNVPAP-YNRVSSVLGWIYFACWSVSFWPQIFLNWRLKNVEGLSIDFIVYNIVGFSCYTVYNSSFFWSESVQDEYKAKHNGSPNSVQVNDVFFGIHAVAVTALTYYQTTIYP--RGERKVS-TVCKCLIALALVIIAAFLIVHLASPSSSFFSKLNFLYLLSYVKLAISLVKYVPQVYLNYTRKSTIGWTIYNILLDFSG 224
BLAST of EWM30246.1 vs. NCBI_GenBank
Match: gi|1072220964|gb|OEU05802.1| (PQ-loop-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 174.096 bits (440), Expect = 5.030e-48 Identity = 101/242 (41.74%), Postives = 154/242 (63.64%), Query Frame = 0
Query: 109 QKASREVVA--FLVLIMAGIVMGLALPRNKELRNEGYATLSNILGWIYFLAWTVSFYPQIFLNWRQRNTEGLSLGFELLNLLGFLFYSVYALSFFLLPQIQEAYRKRHNGHENKVTIQ--DVVFACHATILTALTVAQMLHY-DGIRIYR-RLSWPILMVLTGLL-VITCVALVVVSARGD----------GPSDWLLYLYTISFMKLFVSVIKGVPQAFLNYRRKSTVGWSIHNVLCDFTG 333
+ SR+ VA + + G +GL P+N L Y +S +G+IYFL+W++SFYPQ+ N+++R+T GLS F +LN+LGF Y+ Y SFF I+E Y++R+ G + ++T+Q DV FA HA IL+++T+ Q+ +Y D I+ +LS P + ++ +L V L+V++ RG G +WL YLY +SF+K+F+S+IK +PQ LN++RKSTVGWSI N+L DFTG
Sbjct: 17 ETGSRKTVAVGLSTIFVVGTGIGLLTPKNPAL-TPPYQCISAAIGYIYFLSWSISFYPQVMSNFQRRSTVGLSADFCVLNVLGFSCYTAYNASFFWSATIKEYYKQRY-GPDAEITVQSNDVAFAIHALILSSITLCQIAYYGDEPGIWSIKLSKPTIFIIVSILGVCAMYPLLVITHRGRDNVDYEDDAIGRFNWLDYLYILSFVKIFISLIKYIPQVILNFKRKSTVGWSIWNILLDFTG 256
BLAST of EWM30246.1 vs. NCBI_GenBank
Match: gi|813101928|ref|XP_012193660.1| (hypothetical protein SPRG_00163 [Saprolegnia parasitica CBS 223.65] >gi|641541569|gb|KDO35314.1| hypothetical protein SPRG_00163 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 171.4 bits (433), Expect = 2.586e-47 Identity = 93/216 (43.06%), Postives = 132/216 (61.11%), Query Frame = 0
Query: 120 VLIMAGIVMGLALPRNKELRNEGYATLSNILGWIYFLAWTVSFYPQIFLNWRQRNTEGLSLGFELLNLLGFLFYSVYALSFFLLPQIQEAYRKRHNGHENKVTIQDVVFACHATILTALTVAQMLHYDGIRIYRRLSWPILMVLTGLLVITCVALVVVSARGDGPSDW--LLYLYTISFMKLFVSVIKGVPQAFLNYRRKSTVGWSIHNVLCDFTG 333
V+ + G +G L N + Y +S+I+GW YF W+VSF+PQIFLNWR +N EGLS+ F N++GF Y+VY SFF +QE Y+ HNG N V + DV F HA +TALT Q Y R R++S + L L + A ++V S + L +LY +S++KL +S++K VPQA+LNY+R+ST+GW+I+NVL DF+G
Sbjct: 33 VIAVVGFGLGFGLDANDNVPAP-YNRISSIIGWTYFACWSVSFWPQIFLNWRLKNVEGLSIDFIAYNIVGFSCYTVYNSSFFWSESVQEEYKALHNGSPNSVQVNDVFFGIHAVAVTALTYYQTTIYP--RGERKVS-TVCKSLIALALTIIAAFLIVHLASPSSSFFTKLNFLYLLSYVKLAISLVKYVPQAYLNYKRQSTIGWTIYNVLLDFSG 244
BLAST of EWM30246.1 vs. NCBI_GenBank
Match: gi|672825278|gb|KFH70170.1| (hypothetical protein MVEG_04972 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 170.244 bits (430), Expect = 4.316e-47 Identity = 89/201 (44.28%), Postives = 129/201 (64.18%), Query Frame = 0
Query: 137 ELRNEGYATLSNILGWIYFLAWTVSFYPQIFLNWRQRNTEGLSLGFELLNLLGFLFYSVYALSFFLLPQIQEAYRKRHNGHENKVTIQDVVFACHATILTALTVAQMLHYDGIRIYRRLSWP----ILMVLTGLLVITCVALVVVSARGDGPSDWLLYLYTISFMKLFVSVIKGVPQAFLNYRRKSTVGWSIHNVLCDFTG 333
EL G T S+++GW YF+AW+ SFYPQ LN+R+++ +GLSL F LN+LGFL YS++ L+FF IQ+ YR R++G +N V DV FA HA +L+ T+ Q Y + + +S P IL+ +TG L++ A+ G + W+ +LY +S++KL +S +K PQ +LNY +STVGWSIHN+L DFTG
Sbjct: 2 ELTGLGSFT-SHVIGWAYFIAWSASFYPQAILNYRRKSVQGLSLDFIFLNVLGFLCYSIFNLAFFFSTTIQDQYRDRNDGQDNLVRSNDVFFAVHALVLSTFTLVQTFLYKRDKD-QSVSSPTKVLILITVTGALIVAASAIW-------GSAQWIDFLYYLSYIKLGISFVKYCPQVYLNYSAQSTVGWSIHNILLDFTG 193
BLAST of EWM30246.1 vs. NCBI_GenBank
Match: gi|1032642838|gb|OAQ24191.1| (lysosomal cystine transporter [Mortierella elongata AG-77]) HSP 1 Score: 176.407 bits (446), Expect = 4.985e-47 Identity = 87/191 (45.55%), Postives = 126/191 (65.97%), Query Frame = 0
Query: 146 LSNILGWIYFLAWTVSFYPQIFLNWRQRNTEGLSLGFELLNLLGFLFYSVYALSFFLLPQIQEAYRKRHNGHENKVTIQDVVFACHATILTALTVAQMLHY---DGIRIYRRLSWPILMVLTGLLVITCVALVVVSARGDGPSDWLLYLYTISFMKLFVSVIKGVPQAFLNYRRKSTVGWSIHNVLCDFTG 333
LS+++GW YF+AW+ SFYPQ LNWR++ +GLS+ F LN++GFLFYS++ L+FF +IQE Y++R++G +N V DV FA HA IL T+ Q Y +G R+ +W L+ +G+ V+ V + G G +W+ LY +S++KL +S IK PQ ++N+ KSTVGWSIHN+L DFTG
Sbjct: 19 LSHLIGWAYFIAWSASFYPQAILNWRRKTVQGLSMDFVHLNVVGFLFYSIFNLAFFFSTEIQEEYKRRNDGQKNLVRANDVFFAVHALILATFTLVQTWVYKRDEGQRV-SGFAWAFLLS-SGVSVLVLVGRAL---SGVGSYEWIDILYFLSYIKLAISFIKYCPQVYINWAAKSTVGWSIHNILLDFTG 204
BLAST of EWM30246.1 vs. NCBI_GenBank
Match: gi|1183492997|gb|ORZ16669.1| (PQ loop repeat-domain-containing protein [Lobosporangium transversale]) HSP 1 Score: 171.4 bits (433), Expect = 5.120e-47 Identity = 91/197 (46.19%), Postives = 128/197 (64.97%), Query Frame = 0
Query: 140 NEGYATL-SNILGWIYFLAWTVSFYPQIFLNWRQRNTEGLSLGFELLNLLGFLFYSVYALSFFLLPQIQEAYRKRHNGHENKVTIQDVVFACHATILTALTVAQMLHYDGIRIYRRLSWPILMVLTGLLVI--TCVALVVVSARGDGPSDWLLYLYTISFMKLFVSVIKGVPQAFLNYRRKSTVGWSIHNVLCDFTG 333
++G+ +L S+ +GW YF+AW+ SFYPQ LN+R+++ +GLSL F LN+ GFL YS++ L+FF ++QE YRKR+ G +N V DV FA HA IL++LT+ Q IY+R + LLVI T L+V+ + S W+ LY +S++KL +S IK PQ +LNY +STVGWS+HNVL DFTG
Sbjct: 9 SQGFGSLISHFIGWAYFIAWSASFYPQAILNYRRKSVQGLSLDFIYLNVFGFLCYSIFNLTFFFSSEVQEEYRKRNGGQDNLVRANDVFFAVHALILSSLTLFQTF------IYKRNESQKISNPAKLLVIISTSGVLIVLYSVTIRSSQWIDLLYYLSYIKLGISFIKYCPQVYLNYSAQSTVGWSVHNVLLDFTG 199 The following BLAST results are available for this feature:
BLAST of EWM30246.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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