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Properties
| Property Name | Value |
|---|
| Product | wd repeat-containing protein |
| Orig transcript id | gnl|cribi|Naga_100010g70.6183.mrna |
| Orig protein id | gnl|cribi|Naga_100010g70.6183 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:581739..584428 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3510 ID=rna3510|Name=rna3510|organism=Nannochloropsis gaditana|type=mRNA|length=1569bp
ATGTGGTGGATGCTGAAGCCGCGTCTGCTTTTCTTCTGGGGGATTTTCCT
CCTTGTGGGGCAATTGTACGCCCAAACTGAGGGCGGAAAAAGGCTAACGA
GTCTCCATGCCTTGAGTTTCTTCCGCTCCCGCGTCTGTCAGACCTGTGAT
TTAGTCGGATCCGTAGGAGATTGTGGCTGCGATTTTGATACAGTCAATCA
GGCCACTATATTGCATTTTTTTCCGCTTCTGACAGATCTAGCCCAACGTA
CCTTCTTTCGATATTTCAAAGTGAATTTGAACAAAGATTGCCCCTTTTGG
CACGAGGATATGATGTGCTCCATCCGAGACTGCGCCGTAGTGGAATGTGA
AGCCCACGAGATCCCGCCGGTGTGGATCGAGCGAGATGCGGAGGGTCGGG
CAGTGCGGGAATGCCTCAAAGAATCAGACACGGCTACTGACAGAATGGAA
ATGCATCTGGGCGCGGTCGATCGGAAGGAAGCTATGGTAGGCGTGGATGC
ATTTGCTGGGTGGGAAGAGGGCGACAACGCTCGGGTTTGGATCGAACAGG
AAGAGGAGGACCAGGGGATGACATACATCAATCTCTTGCGCAACCCTGAA
CGTTTTACGGGATATGCAGGACCTTCGGCACGTCGCGCATGGAATGCTGT
TTATGAAAATTGTTTTGAACTGTCACCAGGAGAGCTGGAGGCAGGTGGAC
ATTGCCTGGAAAAGCGCGTCTTCTATCGTCTCATCGCAGGCCTGCAGTCC
TCTATCTCCACGCATCTGGCGTTGGAATATTACGACAAGGCTCAAGACTG
CTGGTTTCCTAACACAGCACTATTCGTGGAGAAAGTGGGCAAGCATCCGG
AGCGCATTCACAATTTGTATTTCACCTATCTTTTCCTTTTGCGTGCCATA
AACAAGGCTGGACCTGAGCTGCTGCTTTACGACTACGACACGGGCAACTC
GGAAGATGATGAATGTGTACGTAGTGCAGTTCAAAACCTTGTTCGCACAT
CTTCCAATACTAGCACCGCAGATCAATGCCACCGGGCATTCGACGAGAGC
GGCATGTTTCAACCTCGAGGTTTGACAGACGGGGCTGAGGCCGCTGCAGA
GGAAGAGCGCGAGTTGCACAAGCTGCGACAGGATTTTTTTGTCCGTTTCC
ACAACATTTCGCGTGTCATGGATTGCGTTGGATGTGAAAAATGTCGCCTT
TGGGGCAAATTACAGATTCTGGGGTTGGGCACCGCTATCAAAATTGTGCT
AGGGAGACCAGAGGATAGAACTCTTGAGGGCAGCCTTTCCTTCCAACGCA
ACGAGGTTATATCACTCATTAACACGGCTCATCAGCTGGCCAAGAGTGTC
AAAGCAGTAGAAAATTTTCAAAAACTTGAGTTTGACGATATATTACAATG
GTGGATGTGGATGAGCGGGCTCGCATTCATCGTAGTAGGCATTTTTCTGC
GCGTCTGTCTGCATAGACAAGAAATGGAAAAAATATCAAAGGAAAAAAAG
CAGGGCGATAGATCAAATGGGAGAAGAGATGTTGGATCGCGGTTAACCTC
GTCAAAGAAGACGAATTAA back to topprotein sequence of rna3510 >rna3510-protein ID=rna3510-protein|Name=rna3510|organism=Nannochloropsis gaditana|type=polypeptide|length=508bp
MLHDNSMFTGTLMQENCHDIHLSLASEIVVAACPKDRVLRVIDVATGTTY
STFGDTAASGLAPVRGTQTSEGLGTGGDYVISSQLFEQALVFHRWGKAQP
LLKCRVSESVGPVVTTPDGFFLLAGGRSGQIYAWEIASGSLVANWDAHYK
AISCMVMTSDGGFLITGSEDTTVRAWALSDILAAERTKNDGTKTACIRPF
CSWSNHSLPVTGLHCGQGGPTCRIVSCSLDHRVHIYELANKDGALCTLQA
PSGVACTSLDPGEKHLLVGGTMGDIFVIDMDVVCQARTASRTLVQFVGTV
GPIGSSKEDWRRLAGHQKAVMALTFTWDGRIALSASEDGSLRWWHMDSRQ
CVRRVTFDNGGPLTGLLLLPRPAALLHVMPKVVLPAPLQPLKKYGAISVT
NEKDDLIFLNTRTPKCKTPDPYRTECTSLLLSFEKLYDAALMTRDATFEE
VGERSRKHDASINVSIQGSSKFSNADNCLDAGIKAARKKSKRHIRKDRIV
GQTCRQKK back to topmRNA from alignment at CM002461.1:581739..584428- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3510 ID=rna3510|Name=rna3510|organism=Nannochloropsis gaditana|type=mRNA|length=2690bp|location=Sequence derived from alignment at CM002461.1:581739..584428- (Nannochloropsis gaditana)
GGCTCAGTCACTAACACGACTCGGCGATGATCCAGGCCGGGCTCTCGCGA
TTCAGTACACCATCCTGTCAGCGTCTTCACACATGTTACACGACAATTCA
ATGTTTACAGGAACTTTGATGCAGGAAAACTGCCATGATATCCACTTGTC
ACTGGCGTCCGAAATAGTTGTGGCTGCTTGCCCGAAAGATAGAGTTTTAC
GGGTGATAGACGTAGCAACTGGGACAACGTACTCAACCTTTGGAGATACA
GCCGCTTCGGGCCTTGCTCCCGTCCGCGGAACACAAACATCCGAAGGATT
GGGCACAGGGGGCGACTACGTCATTTCAAGTCAACTTTTTGAGCAAGCCC
TGGTTTTTCATCGCTGGGGCAAGGCTCAGCCGCTGTTGAAATGTCGGGTG
TCAGAGTCAGTGGGGCCCGTCGTTACTACACCAGACGGATTCTTCTTGCT
CGCGGGGGGGCGATCAGGCCAAATTTATGCGTGGGAGATAGCTTCAGGTT
CCCTTGTAGCGAATTGGGATGCGCACTACAAGGCAATTAGTTGCATGGTC
ATGACAAGTGATGGCGGCTTTTTGATCACAGGCTCGGAAGATACTACTGT
GCGGGCGTGGGCCCTTTCGGACATATTGGCCGCCGAGCGTACAAAAAACG
ATGGAACGAAAACAGGTGAGAGAAACACATAAATACGGCGGTATTCCTCA
GTGTGGGGTCTACGTAAGACCTCGAACGTGAGTGCTTGTGGCCCCAATGA
CGGACAGGAAGCGGAATGACGACCATGTGATGCGAACACGTATATTTTAC
GATAGCTTGACTACCATGTGAGAGCATTGAACAAACTGATATAATGAGAC
TGATGGTCGACCAACGTTCGTGGTAGTATCGGGGGATCAAAATTTTCCAT
ATCACCCACTGCGCAATCGCAGATTCTGCAATAACGTTATAAAAATGACA
TATCTATTTACTCGAGGCATTATATTTTCTCATGACACTACAGCTTGCAT
TCGTCCTTTCTGCTCTTGGTCCAATCATTCCTTACCGGTTACGGGCTTAC
ACTGCGGGCAGGGAGGCCCGACCTGTCGGATTGTCTCCTGCTCCTTAGAC
CACCGAGTGCATATCTATGAGCTAGCGAACAAAGATGGGGCCCTGTGTAC
GCTTCAGGCGCCGTCAGGGGTAGCATGCACGTCCCTGGATCCAGGAGAGA
AGCACTTATTAGTTGGTGGGACAATGGGCGATATCTTTGTCATTGATATG
GACGTGGTATGCCAGGCACGGACGGCGAGTCGCACTCTTGTGCAGTTTGT
GGGAACAGTCGGACCGATTGGAAGCAGCAAGGAAGATTGGAGAAGGCTGG
CGGGTCATCAAAAGGCGGTGATGGCTCTCACCTTCACCTGGGACGGGCGA
ATCGCGTTGTCAGCGTCGGAGGACGGTAGTTTGCGATGGTGGCACATGGA
CAGTCGCCAGTGCGTCAGGAGAGTGACATTTGACAATGGCGGCCCTTTAA
CTGGTCTCCTTCTGCTCCCGCGTCCCGCAGCTTTGCTTCACGTTATGCCT
AAAGTGGTGCTTCCAGCACCGCTTCAGCCGTTAAAAAAATATGGCGCCAT
CTCCGTAACTAATGAGAAAGATGACTTGATCTTTTTGAACACCAGGACTC
CAAAATGCAAGACACCGGACCCTTACCGTACGGAGTGTACGTCACTATTG
CTTTCCTTCGAAAAGCTATACGATGCGGCGCTAATGACAAGGGATGCCAC
CTTTGAAGAAGTGGGAGAGCGTTCCAGAAAGCATGACGCGTCGATCAATG
TGAGTATTCAGGGATCAAGTAAATTCTCTAACGCGGACAATTGCCTGGAT
GCGGGAATCAAAGCCGCCAGAAAGAAGTCCAAGCGACACATAAGAAAAGA
TCGAATTGTGGGACAGACTTGTAGGCAAAAAAAGTAAAATGACAGCTACG
TAGTGCGATAAGGATAGTAGATGTGTTTTCAAACATCTTGAAAATAGGCA
GCTTTCAAACATGACTCTACTCCGGCAACTTCTGTCATATCATTCACCAC
TCTTTTACCTTCCAAGTTCATATACGGAGATGCGCTCAAAAAATGAAAAC
CAAGCGTAAGCCATCGTGAGCGCAAAGAAGGATAAGATGACAAGCCAATT
ACTTAGGCGCACCGGCATGTCCTCTGTCAGCTGCGCCCGTGCCAATGCCA
GAGTGGTCAAACCAAAAGCAACAAAATAGCTTTGGACCGCCGCACGGCGC
ATATTTCCATCAGTTCCACCTCTGAGAACGAACAAAAGATACGCTTGTGC
CAAAAGGAAGCAACCGAAAACTCGCATTGTTACAAACGCGACACGCGCCG
TACCACCTTCATGACGGCTGTGGAAGCCATCCGAGGAGTGGTGGAGAAGA
TACACGAGTACTTCCGGAAACAAGGCGCTGAGAAGGCCAAGTGTAAACAT
GATGCCGGCGTGAATTGCGAAAAGCTTGTTTACTCGCTTCTTTGCGTCTC
TACCTTGGCCGAAAAAGGAGCCTGCGCTAAAAGTTGATGAATGAGCACGA
GCTGATGTCGAAGACATGCGGTGCATGGCAGCCCTTTCCAGTGCCTATCT
TGTCACTGCCTCCACAATAATGGACTTATTGTATTTATGTGATAAGAGAG
AGCTAAAGTAATCAAAAATGACTCTAGTTTTCAGGTTTCA back to topCoding sequence (CDS) from alignment at CM002461.1:581739..584428- >rna3510 ID=rna3510|Name=rna3510|organism=Nannochloropsis gaditana|type=CDS|length=3054bp|location=Sequence derived from alignment at CM002461.1:581739..584428- (Nannochloropsis gaditana)
CTTGCATTCGTCCTTTCTGCTCTTGGTCCAATCATTCCTTACCGGTTACG
GGCTTACACTGCGGGCAGGGAGGCCCGACCTGTCGGATTGTCTCCTGCTC
CTTAGACCACCGAGTGCATATCTATGAGCTAGCGAACAAAGATGGGGCCC
TGTGTACGCTTCAGGCGCCGTCAGGGGTAGCATGCACGTCCCTGGATCCA
GGAGAGAAGCACTTATTAGTTGGTGGGACAATGGGCGATATCTTTGTCAT
TGATATGGACGTGGTATGCCAGGCACGGACGGCGAGTCGCACTCTTGTGC
AGTTTGTGGGAACAGTCGGACCGATTGGAAGCAGCAAGGAAGATTGGAGA
AGGCTGGCGGGTCATCAAAAGGCGGTGATGGCTCTCACCTTCACCTGGGA
CGGGCGAATCGCGTTGTCAGCGTCGGAGGACGGTAGTTTGCGATGGTGGC
ACATGGACAGTCGCCAGTGCGTCAGGAGAGTGACATTTGACAATGGCGGC
CCTTTAACTGGTCTCCTTCTGCTCCCGCGTCCCGCAGCTTTGCTTCACGT
TATGCCTAAAGTGGTGCTTCCAGCACCGCTTCAGCCGTTAAAAAAATATG
GCGCCATCTCCGTAACTAATGAGAAAGATGACTTGATCTTTTTGAACACC
AGGACTCCAAAATGCAAGACACCGGACCCTTACCGTACGGAGTGTACGTC
ACTATTGCTTTCCTTCGAAAAGCTATACGATGCGGCGCTAATGACAAGGG
ATGCCACCTTTGAAGAAGTGGGAGAGCGTTCCAGAAAGCATGACGCGTCG
ATCAATGTGAGTATTCAGGGATCAAGTAAATTCTCTAACGCGGACAATTG
CCTGGATGCGGGAATCAAAGCCGCCAGAAAGAAGTCCAAGCGACACATAA
GAAAAGATCGAATTGTGGGACAGACTTGTAGGCAAAAAAAGTAAATGTTA
CACGACAATTCAATGTTTACAGGAACTTTGATGCAGGAAAACTGCCATGA
TATCCACTTGTCACTGGCGTCCGAAATAGTTGTGGCTGCTTGCCCGAAAG
ATAGAGTTTTACGGGTGATAGACGTAGCAACTGGGACAACGTACTCAACC
TTTGGAGATACAGCCGCTTCGGGCCTTGCTCCCGTCCGCGGAACACAAAC
ATCCGAAGGATTGGGCACAGGGGGCGACTACGTCATTTCAAGTCAACTTT
TTGAGCAAGCCCTGGTTTTTCATCGCTGGGGCAAGGCTCAGCCGCTGTTG
AAATGTCGGGTGTCAGAGTCAGTGGGGCCCGTCGTTACTACACCAGACGG
ATTCTTCTTGCTCGCGGGGGGGCGATCAGGCCAAATTTATGCGTGGGAGA
TAGCTTCAGGTTCCCTTGTAGCGAATTGGGATGCGCACTACAAGGCAATT
AGTTGCATGGTCATGACAAGTGATGGCGGCTTTTTGATCACAGGCTCGGA
AGATACTACTGTGCGGGCGTGGGCCCTTTCGGACATATTGGCCGCCGAGC
GTACAAAAAACGATGGAACGAAAACAGCTTGCATTCGTCCTTTCTGCTCT
TGGTCCAATCATTCCTTACCGGTTACGGGCTTACACTGCGGGCAGGGAGG
CCCGACCTGTCGGATTGTCTCCTGCTCCTTAGACCACCGAGTGCATATCT
ATGAGCTAGCGAACAAAGATGGGGCCCTGTGTACGCTTCAGGCGCCGTCA
GGGGTAGCATGCACGTCCCTGGATCCAGGAGAGAAGCACTTATTAGTTGG
TGGGACAATGGGCGATATCTTTGTCATTGATATGGACGTGGTATGCCAGG
CACGGACGGCGAGTCGCACTCTTGTGCAGTTTGTGGGAACAGTCGGACCG
ATTGGAAGCAGCAAGGAAGATTGGAGAAGGCTGGCGGGTCATCAAAAGGC
GGTGATGGCTCTCACCTTCACCTGGGACGGGCGAATCGCGTTGTCAGCGT
CGGAGGACGGTAGTTTGCGATGGTGGCACATGGACAGTCGCCAGTGCGTC
AGGAGAGTGACATTTGACAATGGCGGCCCTTTAACTGGTCTCCTTCTGCT
CCCGCGTCCCGCAGCTTTGCTTCACGTTATGCCTAAAGTGGTGCTTCCAG
CACCGCTTCAGCCGTTAAAAAAATATGGCGCCATCTCCGTAACTAATGAG
AAAGATGACTTGATCTTTTTGAACACCAGGACTCCAAAATGCAAGACACC
GGACCCTTACCGTACGGAGTGTACGTCACTATTGCTTTCCTTCGAAAAGC
TATACGATGCGGCGCTAATGACAAGGGATGCCACCTTTGAAGAAGTGGGA
GAGCGTTCCAGAAAGCATGACGCGTCGATCAATGTGAGTATTCAGGGATC
AAGTAAATTCTCTAACGCGGACAATTGCCTGGATGCGGGAATCAAAGCCG
CCAGAAAGAAGTCCAAGCGACACATAAGAAAAGATCGAATTGTGGGACAG
ACTTGTAGGCAAAAAAAGTAAATGTTACACGACAATTCAATGTTTACAGG
AACTTTGATGCAGGAAAACTGCCATGATATCCACTTGTCACTGGCGTCCG
AAATAGTTGTGGCTGCTTGCCCGAAAGATAGAGTTTTACGGGTGATAGAC
GTAGCAACTGGGACAACGTACTCAACCTTTGGAGATACAGCCGCTTCGGG
CCTTGCTCCCGTCCGCGGAACACAAACATCCGAAGGATTGGGCACAGGGG
GCGACTACGTCATTTCAAGTCAACTTTTTGAGCAAGCCCTGGTTTTTCAT
CGCTGGGGCAAGGCTCAGCCGCTGTTGAAATGTCGGGTGTCAGAGTCAGT
GGGGCCCGTCGTTACTACACCAGACGGATTCTTCTTGCTCGCGGGGGGGC
GATCAGGCCAAATTTATGCGTGGGAGATAGCTTCAGGTTCCCTTGTAGCG
AATTGGGATGCGCACTACAAGGCAATTAGTTGCATGGTCATGACAAGTGA
TGGCGGCTTTTTGATCACAGGCTCGGAAGATACTACTGTGCGGGCGTGGG
CCCTTTCGGACATATTGGCCGCCGAGCGTACAAAAAACGATGGAACGAAA
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