EWM27213.1, cds3501 (CDS) Nannochloropsis gaditana

Overview
NameEWM27213.1
Unique Namecds3501
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:583764..584346 -
Alignment locationCM002461.1:582492..583435 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27213.1
Productwd repeat-containing protein
Orig transcript idgnl|cribi|Naga_100010g70.6183.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:583764..584346 -
CM002461.1supercontigCM002461.1:582492..583435 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011047Quinonprotein_ADH-like_supfam
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom
IPR001680WD40_repeat
Homology
BLAST of EWM27213.1 vs. NCBI_GenBank
Match: gi|585109393|gb|EWM27213.1| (wd repeat-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 1051.97 bits (2719), Expect = 0.000e+0
Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 0
Query:    1 MLHDNSMFTGTLMQENCHDIHLSLASEIVVAACPKDRVLRVIDVATGTTYSTFGDTAASGLAPVRGTQTSEGLGTGGDYVISSQLFEQALVFHRWGKAQPLLKCRVSESVGPVVTTPDGFFLLAGGRSGQIYAWEIASGSLVANWDAHYKAISCMVMTSDGGFLITGSEDTTVRAWALSDILAAERTKNDGTKTACIRPFCSWSNHSLPVTGLHCGQGGPTCRIVSCSLDHRVHIYELANKDGALCTLQAPSGVACTSLDPGEKHLLVGGTMGDIFVIDMDVVCQARTASRTLVQFVGTVGPIGSSKEDWRRLAGHQKAVMALTFTWDGRIALSASEDGSLRWWHMDSRQCVRRVTFDNGGPLTGLLLLPRPAALLHVMPKVVLPAPLQPLKKYGAISVTNEKDDLIFLNTRTPKCKTPDPYRTECTSLLLSFEKLYDAALMTRDATFEEVGERSRKHDASINVSIQGSSKFSNADNCLDAGIKAARKKSKRHIRKDRIVGQTCRQKK 508
            MLHDNSMFTGTLMQENCHDIHLSLASEIVVAACPKDRVLRVIDVATGTTYSTFGDTAASGLAPVRGTQTSEGLGTGGDYVISSQLFEQALVFHRWGKAQPLLKCRVSESVGPVVTTPDGFFLLAGGRSGQIYAWEIASGSLVANWDAHYKAISCMVMTSDGGFLITGSEDTTVRAWALSDILAAERTKNDGTKTACIRPFCSWSNHSLPVTGLHCGQGGPTCRIVSCSLDHRVHIYELANKDGALCTLQAPSGVACTSLDPGEKHLLVGGTMGDIFVIDMDVVCQARTASRTLVQFVGTVGPIGSSKEDWRRLAGHQKAVMALTFTWDGRIALSASEDGSLRWWHMDSRQCVRRVTFDNGGPLTGLLLLPRPAALLHVMPKVVLPAPLQPLKKYGAISVTNEKDDLIFLNTRTPKCKTPDPYRTECTSLLLSFEKLYDAALMTRDATFEEVGERSRKHDASINVSIQGSSKFSNADNCLDAGIKAARKKSKRHIRKDRIVGQTCRQKK
Sbjct:    1 MLHDNSMFTGTLMQENCHDIHLSLASEIVVAACPKDRVLRVIDVATGTTYSTFGDTAASGLAPVRGTQTSEGLGTGGDYVISSQLFEQALVFHRWGKAQPLLKCRVSESVGPVVTTPDGFFLLAGGRSGQIYAWEIASGSLVANWDAHYKAISCMVMTSDGGFLITGSEDTTVRAWALSDILAAERTKNDGTKTACIRPFCSWSNHSLPVTGLHCGQGGPTCRIVSCSLDHRVHIYELANKDGALCTLQAPSGVACTSLDPGEKHLLVGGTMGDIFVIDMDVVCQARTASRTLVQFVGTVGPIGSSKEDWRRLAGHQKAVMALTFTWDGRIALSASEDGSLRWWHMDSRQCVRRVTFDNGGPLTGLLLLPRPAALLHVMPKVVLPAPLQPLKKYGAISVTNEKDDLIFLNTRTPKCKTPDPYRTECTSLLLSFEKLYDAALMTRDATFEEVGERSRKHDASINVSIQGSSKFSNADNCLDAGIKAARKKSKRHIRKDRIVGQTCRQKK 508          
BLAST of EWM27213.1 vs. NCBI_GenBank
Match: gi|1173950954|gb|OQR98884.1| (WD domain-containing protein [Achlya hypogyna])

HSP 1 Score: 219.935 bits (559), Expect = 1.908e-63
Identity = 140/375 (37.33%), Postives = 196/375 (52.27%), Query Frame = 0
Query:   24 LASEIVVAACPKDRVLRVIDVATGTTYSTFGDTAAS--GLAPVRGTQTSEGLGTGGDYVISSQLFEQALVFHRWGKAQPLLKCRVSESVGPVVTTPDGFFLLAGGRSGQIYAWEIASGSLVANWDAHYKAISCMVMTSDGGFLITGSEDTTVRAWALSDILAAERTKNDGTK--TACIRPFCSWSNHSLPVTGLHCGQGGPTCRIVSCSLDHRVHIYELANKDGALCTLQAPSGVACTSLDPGEKHLLVGGTMGDIFVIDMDVVCQARTASRTLVQFVGTVGPIGSSKEDWRRLAGHQKAVMALTFTWDGRIALSASEDGSLRWWHMDSRQCVRRVTFDNGGPLTGLLLLPRPAALLHVMPKVVLPAPLQPLKKY 394
            +  +++V    KD  + V+D +  +    F  +A +  GLA V  T           ++I+ Q  + AL  H WGK  P LKC V+E +GP+VTT DG F LAGG SG+IY W +ASG+L+  WD HYKA+S + MT D  FL++G ED  V  W L DILAA    +DGT   T  + P  +W++H LP+T +HCG GG   R+ + SLD    I++L     AL ++  PS +     D  E  L +G   G I+V+D+     A TA+   V       P            GH+  V  L  +  GR  +S  +DG +R W   SRQ +R + F  G  +  ++LLPRPA L H +PK     P+ P KKY
Sbjct:    1 MEDQVLVVGSSKDGNVYVVDPSCSSQLFVFKGSACARHGLAVVPRT----------GHLIALQPGKLALHMHMWGKDVPTLKCHVTEPMGPLVTTRDGNFCLAGGASGKIYVWCVASGALLHVWDGHYKAVSALSMTPDDAFLVSGGEDAVVHVWRLLDILAA----SDGTSSLTQGLAPLHTWTDHVLPITHVHCGFGG---RVFTASLDRTAKIWDL-YAGSALVSVTCPSFLNVCVPDAMEHRLFLGAGDGRIYVVDLHAAATAATAATARVVHTAAGTPFSLETLSAEGFVGHEHPVTTLVVSLCGRFVVSGDDDGVVRVWDSVSRQALRTMNFVKGS-IADMVLLPRPAGLFHPVPKTANELPIAPFKKY 356          
BLAST of EWM27213.1 vs. NCBI_GenBank
Match: gi|1173954887|gb|OQS02021.1| (WD domain-containing protein [Thraustotheca clavata])

HSP 1 Score: 209.92 bits (533), Expect = 1.365e-59
Identity = 128/378 (33.86%), Postives = 195/378 (51.59%), Query Frame = 0
Query:   23 SLASEIVVAACPKDRVLRVIDVATGTTYSTFGDTAAS--GLAPVRGTQTSEGLGTGGDYVISSQLFEQALVFHRWGKAQPLLKCRVSESVGPVVTTPDGFFLLAGGRSGQIYAWEIASGSLVANWDAHYKAISCMVMTSDGGFLITGSEDTTVRAWALSDILAAERTKNDGTKTACIRPFCSWSNHSLPVTGLHCGQGGPTCRIVSCSLDHRVHIYELANKDGALCTLQAPSGVACTSLDPGEKHLLVGGTMGDIFVIDMDVVCQARTASRTLVQFVGTVGPIGSSKEDWRRLAGHQKAVMALTFTWDGRIALSASEDGSLRWWHMDSRQCVRRVTFDNGGPLTGLLLLPRPAALLHVMPKVVLPAPLQPLKKYGAIS 398
            ++  +++V    KD  + V+D +  +    F  ++ +  GL  V  T           ++I +Q  + AL  H WGK  P  KC V+E +GP++ T DG F LAGG SG+IY W +A+G+L+  WDAHYKA+S + +T D  FL++G ED  V  W L DIL A  +         + P  +W++H LP+T +HCG GG   R+ + SLD    I++L     ++ ++  PS V     D  E  L +G   G I+V+D+     A TA++  +       P            GH+  +  L  +  GR  +S  +DG++R W   SRQ +R + F  G  ++ ++LLPRPA L H +PK     P+ P KKY A S
Sbjct:    3 AMEDQVLVLGSSKDGNVYVVDPSCSSQLFVFKGSSVTRHGLCVVPRT----------GHLIGAQPGKLALHMHLWGKDVPTYKCHVTEPMGPLIATRDGNFCLAGGASGKIYVWCVATGALLHVWDAHYKAVSALSLTPDNAFLVSGGEDAVVHVWRLLDILDA--SNQSSALNQGLSPLHTWTDHVLPITHIHCGFGG---RVFTSSLDRTTKIWDLFTGH-SMVSITCPSYVNVCVPDAMEHRLFLGAGDGRIYVVDLHAAATAATAAQAQIVSAQEGTPFSQESLSTEGFVGHEHPITNLVVSLCGRFVISGDDDGAVRVWDSVSRQALRTMNFVKGS-ISAMVLLPRPAGLFHPVPKNNYELPIAPFKKYIASS 363          
BLAST of EWM27213.1 vs. NCBI_GenBank
Match: gi|669168801|ref|XP_008619749.1| (hypothetical protein SDRG_15357 [Saprolegnia diclina VS20] >gi|530728605|gb|EQC26847.1| hypothetical protein SDRG_15357 [Saprolegnia diclina VS20])

HSP 1 Score: 207.994 bits (528), Expect = 7.496e-59
Identity = 130/373 (34.85%), Postives = 189/373 (50.67%), Query Frame = 0
Query:   24 LASEIVVAACPKDRVLRVIDVATGTTYSTFGDT--AASGLAPVRGTQTSEGLGTGGDYVISSQLFEQALVFHRWGKAQPLLKCRVSESVGPVVTTPDGFFLLAGGRSGQIYAWEIASGSLVANWDAHYKAISCMVMTSDGGFLITGSEDTTVRAWALSDILAAERTKNDGTKTACIRPFCSWSNHSLPVTGLHCGQGGPTCRIVSCSLDHRVHIYELANKDGALCTLQAPSGVACTSLDPGEKHLLVGGTMGDIFVIDMDVVCQARTASRTLVQFVGTVGPIGSSKEDWRRLAGHQKAVMALTFTWDGRIALSASEDGSLRWWHMDSRQCVRRVTFDNGGPLTGLLLLPRPAALLHVMPKVVLPAPLQPLKKY 394
            +  +++V    KD  + V+D +  +    F  +  A  GLA V  T           ++I+ Q  + AL  H WGK  P LKC V+E +GP++ T DG F +AGG SG+IY W +A+G+L+  WD HYKA+S + +T D  FL++G ED  V  W L DIL A    +  T    + P  +W++H LP+T +HCG GG   RI + SLD    ++++ +   AL ++  PS V     D  E  L +G   G I+V+D+     A TA+   V       P            GH+  V  L  +  GR  +S  +DG +R W   SRQ +R + F  G  +  + LLPRPA L H + K     P+ P KKY
Sbjct:    1 MEDQVLVLGSSKDGNVYVVDPSCSSQLFLFKGSSCARHGLAVVPRT----------GHLITIQPGKLALHMHMWGKDVPTLKCHVTEPMGPLIATRDGNFCIAGGASGKIYVWCVATGALLHVWDGHYKAVSALALTPDDAFLVSGGEDAVVHVWRLLDILDASHEGS--TLNQGLSPLHTWTDHVLPITHVHCGFGG---RIFTASLDRTAKVWDIVHGR-ALVSVTCPSYVNVVVPDAMEHRLFLGAGDGRIYVVDLHAAATAATAAHARVVLAADGAPFSQETLSADGFVGHEHPVTTLVVSLCGRFVISGDDDGVVRVWDSVSRQALRTMNFVKGS-IADMALLPRPAGLFHPVAKTSHELPIAPFKKY 356          
BLAST of EWM27213.1 vs. NCBI_GenBank
Match: gi|813150513|ref|XP_012200903.1| (hypothetical protein SPRG_06703 [Saprolegnia parasitica CBS 223.65] >gi|641534517|gb|KDO28464.1| hypothetical protein SPRG_06703 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 207.994 bits (528), Expect = 7.656e-59
Identity = 130/373 (34.85%), Postives = 188/373 (50.40%), Query Frame = 0
Query:   24 LASEIVVAACPKDRVLRVIDVATGTTYSTFGDT--AASGLAPVRGTQTSEGLGTGGDYVISSQLFEQALVFHRWGKAQPLLKCRVSESVGPVVTTPDGFFLLAGGRSGQIYAWEIASGSLVANWDAHYKAISCMVMTSDGGFLITGSEDTTVRAWALSDILAAERTKNDGTKTACIRPFCSWSNHSLPVTGLHCGQGGPTCRIVSCSLDHRVHIYELANKDGALCTLQAPSGVACTSLDPGEKHLLVGGTMGDIFVIDMDVVCQARTASRTLVQFVGTVGPIGSSKEDWRRLAGHQKAVMALTFTWDGRIALSASEDGSLRWWHMDSRQCVRRVTFDNGGPLTGLLLLPRPAALLHVMPKVVLPAPLQPLKKY 394
            +  +++V    KD  + V+D +  +    F  +  A  GLA V  T           ++I+ Q  + AL  H WGK  P LKC V+E +GP++ T DG F +AGG SG+IY W +A+G+L+  WD HYKA+S + +T D  FL++G ED  V  W L DIL A    +  T    + P  +W++H LP+T +HCG GG   RI + SLD    +++L +   AL ++  PS V     D  E  L +G   G I+V+D+     A TA+   V       P            GH+  V  L  +  GR  +S  +DG +R W   SRQ +R + F  G  +  + LLPRP  L H + K     P+ P KKY
Sbjct:    1 MEDQVLVLGSSKDGNVYVVDPSCSSQLFLFKGSSCARHGLAIVPRT----------GHLITIQPGKLALHMHMWGKDVPTLKCHVTEPMGPLIATRDGNFCIAGGASGKIYVWCVATGALLHVWDGHYKAVSALALTPDDAFLVSGGEDAVVHVWRLLDILDASHEGS--TLNQGLSPLHTWTDHVLPITHVHCGFGG---RIFTASLDRTAKVWDLVHGR-ALVSVTCPSYVNVVVPDAMEHRLFLGAGDGRIYVVDLHAAATAATAAHARVVLAADGAPFSQETLSAEGFVGHEHPVTTLVVSLCGRFVISGDDDGVVRVWDSVSRQALRTMNFVKGS-IADMALLPRPVGLFHPVAKTSHELPIAPFKKY 356          
BLAST of EWM27213.1 vs. NCBI_GenBank
Match: gi|698788540|ref|XP_009827302.1| (hypothetical protein H257_04471 [Aphanomyces astaci] >gi|574118391|gb|ETV83872.1| hypothetical protein H257_04471 [Aphanomyces astaci])

HSP 1 Score: 207.608 bits (527), Expect = 1.033e-58
Identity = 128/375 (34.13%), Postives = 195/375 (52.00%), Query Frame = 0
Query:   24 LASEIVVAACPKDRVLRVIDVATGTTYSTFGDTAAS--GLAPVRGTQTSEGLGTGGDYVISSQLFEQALVFHRWGKAQPLLKCRVSESVGPVVTTPDGFFLLAGGRSGQIYAWEIASGSLVANWDAHYKAISCMVMTSDGGFLITGSEDTTVRAWALSDILAAERTKNDGTKTACIRPFCSWSNHSLPVTGLHCGQGGPTCRIVSCSLDHRVHIYELANKDGALCTLQAPSGVACTSLDPGEKHLLVGGTMGDIFVIDMD--VVCQARTASRTLVQFVGTVGPIGSSKEDWRRLAGHQKAVMALTFTWDGRIALSASEDGSLRWWHMDSRQCVRRVTFDNGGPLTGLLLLPRPAALLHVMPKVVLPAPLQPLKKY 394
            +   ++V    KD  + V+D   G     F  ++ S  GL  V  T           ++I+ Q  + A+  H WGK  P  KC V+E +GP+VTT DG + +AGG SG++Y W++A+G+L+  WDAHYKA+S + +TSD  F+++G ED  V  W L D L  + +  D    +   P  +W++H LP+T +HCG GG   R+ + SLD    +Y++ +    L ++  PS V   + D  E  L +G   G I+V+D+          A+R +V   GT  P            GH+  V AL  T  G+  +S  ++G++R W   SRQ +R V+   GG ++ +LLLPRPA L H + K      + P KKY
Sbjct:    1 MEDHVLVLGSSKDGNIYVVDPTCGAQLFIFKGSSCSRHGLVAVPRTH----------HLIALQPGKLAMHMHMWGKDVPHFKCHVTEHMGPMVTTSDGNYCIAGGASGKMYIWDVATGALLHVWDAHYKAVSALRLTSDDAFVVSGGEDAVVHVWRLLDHL--DTSSTDSALQSGATPVHTWTDHVLPITSIHCGLGGVNGRVFTSSLDRTTKVYDIPSGT-CLVSITCPSFVNVCAADAMEHRLFLGAGDGRIYVVDLHAAATAATAAAARVVVTHNGT--PFAKDALSVDGFVGHESPVTALLVTECGQYVISGDDEGTVRMWDSVSRQSLRAVSLLKGG-VSTMLLLPRPAGLFHPV-KDAAELSIAPFKKY 358          
BLAST of EWM27213.1 vs. NCBI_GenBank
Match: gi|673046987|ref|XP_008877454.1| (hypothetical protein H310_12239 [Aphanomyces invadans] >gi|574466868|gb|ETV93894.1| hypothetical protein H310_12239 [Aphanomyces invadans])

HSP 1 Score: 206.453 bits (524), Expect = 3.033e-58
Identity = 128/373 (34.32%), Postives = 194/373 (52.01%), Query Frame = 0
Query:   24 LASEIVVAACPKDRVLRVIDVATGTTYSTFGDTAAS--GLAPVRGTQTSEGLGTGGDYVISSQLFEQALVFHRWGKAQPLLKCRVSESVGPVVTTPDGFFLLAGGRSGQIYAWEIASGSLVANWDAHYKAISCMVMTSDGGFLITGSEDTTVRAWALSDILAAERTKNDGTKTACIRPFCSWSNHSLPVTGLHCGQGGPTCRIVSCSLDHRVHIYELANKDGALCTLQAPSGVACTSLDPGEKHLLVGGTMGDIFVIDMDVVCQARTASRTLVQFVGTVGPIGSSKEDWRRLAGHQKAVMALTFTWDGRIALSASEDGSLRWWHMDSRQCVRRVTFDNGGPLTGLLLLPRPAALLHVMPKVVLPAPLQPLKKY 394
            +   ++V A  KD  + V+D   G     F  ++ S  GL  +  T           ++I+ Q  + A+  H WGK  P  KC V+E +GP+VTT +G + +AGG SG++Y W +ASG+L+  WDAHYKA+S + +TSD  F+++G ED  V  W L D+L A  T  D    +   P  +W++H LP+T +HCG GG   R+ + SLD    +Y++ +    L ++  PS +     D  E  L +G   G I+V+D+     A TA+   V       P            GH+  V AL  +  G+  +S  ++G++R W   SRQ +R V+F  GG ++ +LLLPRPA L H + K      + P KKY
Sbjct:    1 MEDHVLVLASSKDGNIYVVDPMCGAQLFIFKGSSCSRHGLVAIPRTH----------HLIALQPGKLAMHMHMWGKDVPHFKCHVTEHMGPMVTTSEGNYCIAGGASGKMYLWCVASGALLHVWDAHYKAVSALRLTSDDAFVVSGGEDAVVHVWRLLDLLDASST--DSALQSSAAPVYTWTDHVLPITSIHCGLGGVNGRVFTSSLDRTTKVYDIPSGS-CLVSITCPSFINVCVADAMENRLFLGAGDGRIYVVDLHAAATAATAAAARVVVAHGGTPFAKDALSMDGFVGHETPVTALLVSVCGQYVISGDDEGTVRVWDSVSRQSLRAVSFLKGG-VSSMLLLPRPAGLFHPV-KEASNLGIAPFKKY 358          
BLAST of EWM27213.1 vs. NCBI_GenBank
Match: gi|1183368575|gb|ORX94622.1| (WD40 repeat-like protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 196.052 bits (497), Expect = 3.297e-53
Identity = 124/373 (33.24%), Postives = 195/373 (52.28%), Query Frame = 0
Query:   24 LASEIVVAACPKDRVLRVIDVATGTTYSTFGDTAASGLAPVRGTQTSEGLGTGGDYVISSQLFEQALVFHRWGKAQPLLKCRVSESVGPVVTTPDGFFLLAGGRSGQIYAWEIASGSLVANWDAHYKAISCMVMTSDGGFLITGSEDTTVRAWALSDILAAERTKNDGTKTACIRPFCSWSNHSLPVTGLHCGQGG-PTCRIVSCSLDHRVHIYELANKDGALCTLQAPSGVACTSLDPGEKHLLVGGTMGDIFVIDMDVVCQAR-TASRTLVQFVGTVGPIGSSKEDWRRLAGHQKAVMALTFTWDGRIALSASEDGSLRWWHMDSRQCVRRVTFDNGGPLTGLLLLPRPAALLHVMP-KVVLPAPLQPLKK 393
            + SE+ +     D  + V D+ +GT   +F  +  +  A +    T  G G  G  V+S+Q  +  +  + W K Q  LK    E +  + TT  G F + G  SG+IY WE+++G+L++ +DAHYK I+ +  + D   L TGSED+ V  W L+ I+     +N         P  SWS+HSLP+T +HCG GG    R+V+ SLDH   +++LA+    L TL  PS V+  ++D  E  +       +I+ ++M      R  +S   V  +GTV   G + E      GH +   +L  ++DG + +S SEDGS   W + SRQ +R  T  + GP+T + ++ +PA L++ M    VLP P+QP K+
Sbjct:    1 MFSEVAITTSNTDSHIYVWDIRSGTVLGSFKQSTCNAHA-LALANTPLGNGRPG-LVLSAQNDKALMHAYSWTKDQIHLKFPFPEKITTLATTNKGTFCVGGTESGKIYVWEVSTGNLLSTFDAHYKKITVLRFSQDDTVLFTGSEDSAVNVWLLNSIIDESNAQNRS-------PLYSWSDHSLPITDIHCGSGGLKFARVVTSSLDHTCKVWDLASG-SLLTTLLFPSFVSAVAMDITETRVFAATGDSNIYQVNMYKSQADRGHSSFESVGGMGTVVSAGINGESSLLFKGHTEPAHSLALSFDGTLLISGSEDGSAMVWDVTSRQMLRSFT-QHKGPITNVAVILKPADLMNTMAGTTVLPTPIQPFKR 362          
BLAST of EWM27213.1 vs. NCBI_GenBank
Match: gi|566021879|gb|ETI44790.1| (hypothetical protein F443_10545 [Phytophthora parasitica P1569])

HSP 1 Score: 193.356 bits (490), Expect = 4.710e-53
Identity = 127/401 (31.67%), Postives = 193/401 (48.13%), Query Frame = 0
Query:   23 SLASEIVVAACPKDRVLRVIDVATGTTYSTFGD--TAASGLAPVRGTQTSEGLGTGGDYVISSQLFEQALVFHRWGKAQPLLKCRVSESVGPVVTTPDGFFLLAGGRSGQIYAWEIASGSLVANWDAHYKAISCMVMTSDGGFLITGSEDTTVRAWALSDILAAERTKNDGTKTACIRPFCSWSNHSLPVTGLHCGQGGPTCRIVSCSLDHRVHIYELANKDGALCTLQAPSGVACTSLDPGEKHLLVGGTMGDIFVIDMDVVCQARTASRTLVQFVGT------VGPIGSSKEDWRRLAGHQKAVMALTFTWDGRIALSASEDGSLRWWHMDSRQCVRRVTFDNGGPLTGLLLLPRPAALLHVMPK------------VVLPAPLQPLKKYGAISVTNEK 403
            +LA  +++    ++  L V D +TG     F +  +A +G+ PV  T          D++++ Q  + AL    WGK  P+ KC V+E +GP+ ++  G FL AG  SG++Y W++ +G LV  +DAHYK +S + +TSD   LIT  ED  V  W L D+L  +      +    + P  S+++H LPVT LH G GG   RI + SLD    I+ L N    L ++  PS V     DP E+ L +G   G I+ +D++    + TA++  V    T        P G          GH+ +V  L     G   +S  E+G++  W   SRQ +R +     G +T L+LLPRP  L                  +  P P+ PLKKY  ++ TN+ 
Sbjct:    4 ALADHVLLLGSSQENELLVADASTGGQLYCFKNCRSALNGVHPVPRT----------DHLVAVQEGKLALNLWNWGKDMPVWKCHVAEKMGPITSSSCGNFLFAGAESGKVYVWDVKTGELVTVFDAHYKRVSALALTSDDSHLITAGEDALVHVWRLVDLL--DEPDAASSFQQGVTPVVSFTDHVLPVTSLHVGLGGVNARIYTSSLDRTCKIWSL-NSSQCLYSVSCPSYVNVCIADPMEQRLFMGCGNGQIYALDLNAAATSVTAAKARVANASTGSSSANAAPWGPEALLPDSFEGHESSVTTLQIHTSGAFLVSGDENGAVHVWDSLSRQSLRNIKLFK-GKVTALVLLPRPRHLFRQAKTPFNMESEDLDDVLATPLPVAPLKKY--MNATNDN 388          
BLAST of EWM27213.1 vs. NCBI_GenBank
Match: gi|568017137|gb|ETL91314.1| (hypothetical protein L917_10143 [Phytophthora parasitica])

HSP 1 Score: 192.586 bits (488), Expect = 9.297e-53
Identity = 127/401 (31.67%), Postives = 192/401 (47.88%), Query Frame = 0
Query:   23 SLASEIVVAACPKDRVLRVIDVATGTTYSTFGD--TAASGLAPVRGTQTSEGLGTGGDYVISSQLFEQALVFHRWGKAQPLLKCRVSESVGPVVTTPDGFFLLAGGRSGQIYAWEIASGSLVANWDAHYKAISCMVMTSDGGFLITGSEDTTVRAWALSDILAAERTKNDGTKTACIRPFCSWSNHSLPVTGLHCGQGGPTCRIVSCSLDHRVHIYELANKDGALCTLQAPSGVACTSLDPGEKHLLVGGTMGDIFVIDMDVVCQARTASRTLVQFVGT------VGPIGSSKEDWRRLAGHQKAVMALTFTWDGRIALSASEDGSLRWWHMDSRQCVRRVTFDNGGPLTGLLLLPRPAALLHVMPK------------VVLPAPLQPLKKYGAISVTNEK 403
            +LA  +++    ++  L V D +TG     F +  +A +G+ PV  T          D++++ Q  + AL    WGK  P+ KC V+E +GP+ ++  G FL AG  SG++Y W++ +G LV  +DAHYK +S + +TSD   LIT  ED  V  W L D+L  +      +    + P  S+++H LPVT LH G GG   RI + SLD    I+ L N    L ++  PS V     DP E+ L +G   G I+ +D++    + TA++  V    T        P G          GH+ +V  L     G   +S  E G++  W   SRQ +R +     G +T L+LLPRP  L                  +  P P+ PLKKY  ++ TN+ 
Sbjct:    4 ALADHVLLLGSSQENELLVADASTGGQLYCFKNCRSALNGVHPVPRT----------DHLVAVQEGKLALNLWNWGKDMPVWKCHVAEKMGPITSSSCGNFLFAGAESGKVYVWDVKTGELVTVFDAHYKRVSALALTSDDSHLITAGEDALVHVWRLVDLL--DEPDAASSFQQGVTPVVSFTDHVLPVTSLHVGLGGVNARIYTSSLDRTCKIWSL-NSSQCLYSVSCPSYVNVCIADPMEQRLFMGCGNGQIYALDLNAAATSVTAAKARVANASTGSSSANAAPWGPEALLPDSFEGHESSVTTLQIHTSGAFLVSGDESGAVHVWDSLSRQSLRNIKLFK-GKVTALVLLPRPRHLFRQAKTPFNMESEDLDDVLATPLPVAPLKKY--MNATNDN 388          
The following BLAST results are available for this feature:
BLAST of EWM27213.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109393|gb|EWM27213.1|0.000e+0100.00wd repeat-containing protein [Nannochloropsis gadi... [more]
gi|1173950954|gb|OQR98884.1|1.908e-6337.33WD domain-containing protein [Achlya hypogyna][more]
gi|1173954887|gb|OQS02021.1|1.365e-5933.86WD domain-containing protein [Thraustotheca clavat... [more]
gi|669168801|ref|XP_008619749.1|7.496e-5934.85hypothetical protein SDRG_15357 [Saprolegnia dicli... [more]
gi|813150513|ref|XP_012200903.1|7.656e-5934.85hypothetical protein SPRG_06703 [Saprolegnia paras... [more]
gi|698788540|ref|XP_009827302.1|1.033e-5834.13hypothetical protein H257_04471 [Aphanomyces astac... [more]
gi|673046987|ref|XP_008877454.1|3.033e-5834.32hypothetical protein H310_12239 [Aphanomyces invad... [more]
gi|1183368575|gb|ORX94622.1|3.297e-5333.24WD40 repeat-like protein [Basidiobolus meristospor... [more]
gi|566021879|gb|ETI44790.1|4.710e-5331.67hypothetical protein F443_10545 [Phytophthora para... [more]
gi|568017137|gb|ETL91314.1|9.297e-5331.67hypothetical protein L917_10143 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3510rna3510Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications