rna351, rna351 (mRNA) Nannochloropsis gaditana

Overview
Namerna351
Unique Namerna351
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length582
Alignment locationCM002455.1:859170..859873 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100003g145.1856.mrna
Orig protein idgnl|cribi|Naga_100003g145.1856
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:859170..859873 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100003g145gene338Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna351rna351-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30339.1cds351Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna351 ID=rna351|Name=rna351|organism=Nannochloropsis gaditana|type=mRNA|length=582bp
ATGCTTTCAAGTGCCGCATTCCGCAGTCCCTCAGGGATGTGGGGGCTGCA
AATGTGTGCGCCTGAAGCACTTTGTGTTTGTCGAAGAATGAATAGAAGAC
GCGAAACACACGGGCCCTGTCAGCGAAGTCGTGGGACACCGGAATGCATC
CGAGATCTCCTTCCCGGCAAAGCACAGCTCACTATGGGAAGCATCAAGCT
GCAAGAAATGAAAGGGCGGGACCGAAAGTGGCGCACGACCGCGCATTATG
CCATTCGACAGCTTGTTTTACATCTTGAATCGTCTGTCATCAGAAGCCAA
CTTCTCTTTGCACCTCGCGGACGGCGCAATCCATGTGGGATTTCCCGAAA
AGCAAGGCGATCACTAGGGAAAGAAGTTCTAGCGCATTTTGTCCGTTGGT
TTCAAGATTTGGCGAATAGAGAGGATTCCCGCATCAAGCCCTGCATGGTG
GTGGACCCCGTACTACCAGGTTCGAAAGCCATCGAAGGCGTGAGAAAAGG
GCACAATTTCCGCAAGGGAAACGCCCCTCTCTCGGAGGAGTATCGCACGG
CTGCTCGAGGTAACACAGGATGCTGGTCGTAA
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protein sequence of rna351

>rna351-protein ID=rna351-protein|Name=rna351|organism=Nannochloropsis gaditana|type=polypeptide|length=154bp
MTAYPVLMYYIIARFASRVFQIGWTICLFMILEFVFAALFGYSGVFSVLQ
LLVDCAVTNDWGGINGNALKFYLGLFSIAFDLLFMIQHFVLYPTSATAVT
PSKWKITFVGAVHKLYHRLMREGQNAYTLRISKKLSTTRTEIIIRFKASA
FQES
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mRNA from alignment at CM002455.1:859170..859873-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna351 ID=rna351|Name=rna351|organism=Nannochloropsis gaditana|type=mRNA|length=704bp|location=Sequence derived from alignment at CM002455.1:859170..859873- (Nannochloropsis gaditana)
ATGACAGCCTATCCCGTTTTGATGTATTAGTTTGGACAGTGGGGATATTC
TTCATGGTTATAAACTCATCATCTGTCATCCTATAGCATTATTGCCCGCT
TCGCTTCGCGAGTTTTTCAGATAGGTTGGACTATTTGTCTGTTCATGATT
CTTGAGTTTGTCTTTGCTGCGTTGTTTGGGTACAGTGCGACTGATCATAA
TGTAGATTACACTAAATTCAACATGCCCATTTCTAATTCGCAGGCGGTGT
CTTCTCTGTCCTACAACTTCTGGTGGATTGTGCCGTCACAAATGACTGGG
GAGGGATCAACGGCAATGCCCTCAAGTTTTATCTTGGTTTATTTTCCATT
GCTTTCGACCTGCTTTTCATGATACAGCACTTCGTTCTGTATCCGACGTC
TGCAACTGCAGTAACGCCGTCGAAATGGAGTAAATGAGTTCGATCGAATC
TGACTTTCCATTCTTTGCGGCGGACAAAACGGCAAGTCTGAGGTTTTAAA
GGCGAGAAATCACTTTTGTTGGGGCTGTACACAAATTGTACCATAGGTTG
ATGCGAGAAGGTCAAAATGCTTACACTGTATAATGTAGGCAAAGACTAAA
TAGTTGACTAGAGATAGATAGAGCTAAGAATTAGCAAAAAATTATCAACA
ACCCGAACAGAAATAATAATAAGATTTAAGGCTTCAGCTTTTCAGGAGTC
GTGA
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Coding sequence (CDS) from alignment at CM002455.1:859170..859873-

>rna351 ID=rna351|Name=rna351|organism=Nannochloropsis gaditana|type=CDS|length=2325bp|location=Sequence derived from alignment at CM002455.1:859170..859873- (Nannochloropsis gaditana)
CTAAGAATTAGCAAAAAATTATCAACAACCCGAACAGAAATAATAATAAG
ATTTAAGGCTTCAGCTTTTCAGGAGTCGTGAAAATCACTTTTGTTGGGGC
TGTACACAAATTGTACCATAGGTTGATGCGAGAAGGTCAAAATGCTTACA
CTGCGGTGTCTTCTCTGTCCTACAACTTCTGGTGGATTGTGCCGTCACAA
ATGACTGGGGAGGGATCAACGGCAATGCCCTCAAGTTTTATCTTGGTTTA
TTTTCCATTGCTTTCGACCTGCTTTTCATGATACAGCACTTCGTTCTGTA
TCCGACGTCTGCAACTGCAGTAACGCCGTCGAAATGGACATTATTGCCCG
CTTCGCTTCGCGAGTTTTTCAGATAGGTTGGACTATTTGTCTGTTCATGA
TTCTTGAGTTTGTCTTTGCTGCGTTGTTTGGGTACAATGACAGCCTATCC
CGTTTTGATGTATTACTAAGAATTAGCAAAAAATTATCAACAACCCGAAC
AGAAATAATAATAAGATTTAAGGCTTCAGCTTTTCAGGAGTCGTGAAAAT
CACTTTTGTTGGGGCTGTACACAAATTGTACCATAGGTTGATGCGAGAAG
GTCAAAATGCTTACACTGCGGTGTCTTCTCTGTCCTACAACTTCTGGTGG
ATTGTGCCGTCACAAATGACTGGGGAGGGATCAACGGCAATGCCCTCAAG
TTTTATCTTGGTTTATTTTCCATTGCTTTCGACCTGCTTTTCATGATACA
GCACTTCGTTCTGTATCCGACGTCTGCAACTGCAGTAACGCCGTCGAAAT
GGACATTATTGCCCGCTTCGCTTCGCGAGTTTTTCAGATAGGTTGGACTA
TTTGTCTGTTCATGATTCTTGAGTTTGTCTTTGCTGCGTTGTTTGGGTAC
AATGACAGCCTATCCCGTTTTGATGTATTACTAAGAATTAGCAAAAAATT
ATCAACAACCCGAACAGAAATAATAATAAGATTTAAGGCTTCAGCTTTTC
AGGAGTCGTGAAAATCACTTTTGTTGGGGCTGTACACAAATTGTACCATA
GGTTGATGCGAGAAGGTCAAAATGCTTACACTGCGGTGTCTTCTCTGTCC
TACAACTTCTGGTGGATTGTGCCGTCACAAATGACTGGGGAGGGATCAAC
GGCAATGCCCTCAAGTTTTATCTTGGTTTATTTTCCATTGCTTTCGACCT
GCTTTTCATGATACAGCACTTCGTTCTGTATCCGACGTCTGCAACTGCAG
TAACGCCGTCGAAATGGACATTATTGCCCGCTTCGCTTCGCGAGTTTTTC
AGATAGGTTGGACTATTTGTCTGTTCATGATTCTTGAGTTTGTCTTTGCT
GCGTTGTTTGGGTACAATGACAGCCTATCCCGTTTTGATGTATTACTAAG
AATTAGCAAAAAATTATCAACAACCCGAACAGAAATAATAATAAGATTTA
AGGCTTCAGCTTTTCAGGAGTCGTGAAAATCACTTTTGTTGGGGCTGTAC
ACAAATTGTACCATAGGTTGATGCGAGAAGGTCAAAATGCTTACACTGCG
GTGTCTTCTCTGTCCTACAACTTCTGGTGGATTGTGCCGTCACAAATGAC
TGGGGAGGGATCAACGGCAATGCCCTCAAGTTTTATCTTGGTTTATTTTC
CATTGCTTTCGACCTGCTTTTCATGATACAGCACTTCGTTCTGTATCCGA
CGTCTGCAACTGCAGTAACGCCGTCGAAATGGACATTATTGCCCGCTTCG
CTTCGCGAGTTTTTCAGATAGGTTGGACTATTTGTCTGTTCATGATTCTT
GAGTTTGTCTTTGCTGCGTTGTTTGGGTACAATGACAGCCTATCCCGTTT
TGATGTATTACTAAGAATTAGCAAAAAATTATCAACAACCCGAACAGAAA
TAATAATAAGATTTAAGGCTTCAGCTTTTCAGGAGTCGTGAAAATCACTT
TTGTTGGGGCTGTACACAAATTGTACCATAGGTTGATGCGAGAAGGTCAA
AATGCTTACACTGCGGTGTCTTCTCTGTCCTACAACTTCTGGTGGATTGT
GCCGTCACAAATGACTGGGGAGGGATCAACGGCAATGCCCTCAAGTTTTA
TCTTGGTTTATTTTCCATTGCTTTCGACCTGCTTTTCATGATACAGCACT
TCGTTCTGTATCCGACGTCTGCAACTGCAGTAACGCCGTCGAAATGGACA
TTATTGCCCGCTTCGCTTCGCGAGTTTTTCAGATAGGTTGGACTATTTGT
CTGTTCATGATTCTTGAGTTTGTCTTTGCTGCGTTGTTTGGGTACAATGA
CAGCCTATCCCGTTTTGATGTATTA
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Synonyms
Publications