EWM30339.1, cds351 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30339.1 vs. NCBI_GenBank
Match: gi|585112998|gb|EWM30339.1| (hypothetical protein Naga_100003g145 [Nannochloropsis gaditana]) HSP 1 Score: 317.39 bits (812), Expect = 9.471e-110 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query: 1 MTAYPVLMYYIIARFASRVFQIGWTICLFMILEFVFAALFGYSGVFSVLQLLVDCAVTNDWGGINGNALKFYLGLFSIAFDLLFMIQHFVLYPTSATAVTPSKWKITFVGAVHKLYHRLMREGQNAYTLRISKKLSTTRTEIIIRFKASAFQES 154
MTAYPVLMYYIIARFASRVFQIGWTICLFMILEFVFAALFGYSGVFSVLQLLVDCAVTNDWGGINGNALKFYLGLFSIAFDLLFMIQHFVLYPTSATAVTPSKWKITFVGAVHKLYHRLMREGQNAYTLRISKKLSTTRTEIIIRFKASAFQES
Sbjct: 1 MTAYPVLMYYIIARFASRVFQIGWTICLFMILEFVFAALFGYSGVFSVLQLLVDCAVTNDWGGINGNALKFYLGLFSIAFDLLFMIQHFVLYPTSATAVTPSKWKITFVGAVHKLYHRLMREGQNAYTLRISKKLSTTRTEIIIRFKASAFQES 154
BLAST of EWM30339.1 vs. NCBI_GenBank
Match: gi|676377799|ref|XP_009032178.1| (hypothetical protein AURANDRAFT_18435 [Aureococcus anophagefferens] >gi|323456637|gb|EGB12503.1| hypothetical protein AURANDRAFT_18435 [Aureococcus anophagefferens]) HSP 1 Score: 75.485 bits (184), Expect = 1.603e-13 Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 0
Query: 18 RVFQIGWTICLFMILEFVFAALFGYSGVFSVLQLLVDCAVTNDWGGINGNALKFYLGLFSIAFDLLFMIQHFVLYPT--SATAVTP 101
R +GW+I ++L+F G+ S LQL++DCA T DW GI G+ KF LG SI FDLLFM+QH+VLYP + TA P
Sbjct: 191 RQSTVGWSI-HNILLDFA-------GGLLSTLQLVLDCADTRDWSGIVGDVAKFALGSISIVFDLLFMVQHYVLYPPKRAGTAHAP 268
BLAST of EWM30339.1 vs. NCBI_GenBank
Match: gi|875284436|gb|KMU78163.1| (hypothetical protein CISG_07003 [Coccidioides immitis RMSCC 3703]) HSP 1 Score: 71.2478 bits (173), Expect = 1.422e-12 Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 0
Query: 18 RVFQIGWTICLFMILEFVFAALFGYSGVFSVLQLLVDCAVTNDWGGINGNALKFYLGLFSIAFDLLFMIQHFVLYPT 94
R +GW+I ++L+F GV S+LQL++D A+ +DW GI GN +K LG SI FDL+FM QH+++YP
Sbjct: 79 RKSTVGWSIGQ-ILLDF-------SGGVLSILQLIIDSALEDDWSGITGNPIKLLLGNVSIFFDLIFMAQHYIIYPD 147
BLAST of EWM30339.1 vs. NCBI_GenBank
Match: gi|258566015|ref|XP_002583752.1| (conserved hypothetical protein [Uncinocarpus reesii 1704] >gi|237907453|gb|EEP81854.1| conserved hypothetical protein [Uncinocarpus reesii 1704]) HSP 1 Score: 72.0182 bits (175), Expect = 2.016e-12 Identity = 37/83 (44.58%), Postives = 50/83 (60.24%), Query Frame = 0
Query: 18 RVFQIGWTICLFMILEFVFAALFGYSG-VFSVLQLLVDCAVTNDWGGINGNALKFYLGLFSIAFDLLFMIQHFVLYPTSATAV 99
R IGW+I LF +SG V S+LQL++D A+ +DW GI GN +K LG SI FDL+FM QH+++YP A+
Sbjct: 150 RKSTIGWSIGQI---------LFDFSGGVLSILQLVIDSALEDDWSGITGNPIKLALGNVSIFFDLIFMAQHYIIYPDKRVAL 223
BLAST of EWM30339.1 vs. NCBI_GenBank
Match: gi|224013618|ref|XP_002296473.1| (hypothetical protein THAPSDRAFT_36686, partial [Thalassiosira pseudonana CCMP1335] >gi|220968825|gb|EED87169.1| hypothetical protein THAPSDRAFT_36686, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 72.0182 bits (175), Expect = 2.721e-12 Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 0
Query: 17 SRVFQIGWTICLFMILEFVFAALFGYSGVFSVLQLLVDCAVTNDWGGINGNALKFYLGLFSIAFDLLFMIQHFVLYPTSA 96
SR +GW + L +IL+ GV S+LQL+ DCA +DW GI GN K L L +I FDL+F++QH++LYP S
Sbjct: 174 SRKSTVGWNV-LNVILDLT-------GGVLSLLQLIGDCAGLSDWSGITGNPAKMALALVTICFDLIFLVQHYLLYPESG 245
BLAST of EWM30339.1 vs. NCBI_GenBank
Match: gi|1103685160|gb|OJD21231.1| (hypothetical protein ACJ73_07430 [Blastomyces percursus]) HSP 1 Score: 71.633 bits (174), Expect = 6.142e-12 Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 0
Query: 18 RVFQIGWTICLFMILEFVFAALFGYSGVFSVLQLLVDCAVTNDWGGINGNALKFYLGLFSIAFDLLFMIQHFVLY 92
R IGW+I ++L+F GV SVLQLL+D A+ +DW GI GN +K LG SI FD++FM+QH+VLY
Sbjct: 203 RKSTIGWSISA-ILLDF-------SGGVLSVLQLLIDSALEDDWSGITGNPIKLLLGNVSIFFDVIFMLQHYVLY 269
BLAST of EWM30339.1 vs. NCBI_GenBank
Match: gi|729701982|emb|CEJ01169.1| (Putative Cystinosin [Rhizopus microsporus]) HSP 1 Score: 67.781 bits (164), Expect = 8.499e-12 Identity = 34/90 (37.78%), Postives = 55/90 (61.11%), Query Frame = 0
Query: 3 AYPVLMYYIIARFASRVFQIGWTICLFMILEFVFAALFGYSGVFSVLQLLVDCAVTNDWGGINGNALKFYLGLFSIAFDLLFMIQHFVLY 92
+Y L+ +I R +GW+I ++L+F G S+ QLL+D +++ DW G++G+ +K LG+ SIAFD++FM+QHFV Y
Sbjct: 10 SYVKLLVSLIKYIPQRKSTLGWSIH-NILLDFT-------GGTLSITQLLLDASISGDWSGVSGDPVKLGLGVQSIAFDIIFMLQHFVWY 91
BLAST of EWM30339.1 vs. NCBI_GenBank
Match: gi|1032647147|gb|OAQ28449.1| (lysosomal cystine transporter [Mortierella elongata AG-77]) HSP 1 Score: 71.2478 bits (173), Expect = 9.348e-12 Identity = 42/127 (33.07%), Postives = 64/127 (50.39%), Query Frame = 0
Query: 22 IGWTICLFMILEFVFAALFGYSGVFSVLQLLVDCAVTNDWGGINGNALKFYLGLFSIAFDLLFMIQHFVLYPTSATAVTPSKWKITFVGAVHKLYHRLMREGQNAYT------LRISKKLSTTRTEI 142
+GW+I ++L+F G S+ QL++D ++ DW GI+G+ +KF LG SIAFDL+FM QHF+LY P + G H+ L+ G Y+ R+S+ S E+
Sbjct: 183 VGWSIH-NILLDFT-------GGALSIGQLVLDAYISGDWSGISGDPVKFGLGFLSIAFDLIFMTQHFILYRNRKDFYAPLS-MVENNGEAHESKKLLLSPGHRTYSSIQREDARVSRPASMKDLEL 300
BLAST of EWM30339.1 vs. NCBI_GenBank
Match: gi|1183373549|gb|ORX99256.1| (hypothetical protein K493DRAFT_212900 [Basidiobolus meristosporus CBS 931.73]) HSP 1 Score: 70.0922 bits (170), Expect = 1.227e-11 Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 0
Query: 22 IGWTICLFMILEFVFAALFGYSGVFSVLQLLVDCAVTNDWGGINGNALKFYLGLFSIAFDLLFMIQHFVLYPTSATAV 99
+GW+I +IL+F G+ S+ QLL+D AV NDW GI GN +K LG SI FDL+F QH++LYP +
Sbjct: 172 VGWSIH-NIILDFT-------GGILSIAQLLLDAAVANDWSGITGNPIKLGLGWVSILFDLVFFTQHYILYPDRTDPI 241
BLAST of EWM30339.1 vs. NCBI_GenBank
Match: gi|1111875461|gb|OJJ47889.1| (hypothetical protein ASPZODRAFT_131484 [Penicilliopsis zonata CBS 506.65]) HSP 1 Score: 70.4774 bits (171), Expect = 1.334e-11 Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 0
Query: 18 RVFQIGWTICLFMILEFVFAALFGYSG-VFSVLQLLVDCAVTNDWGGINGNALKFYLGLFSIAFDLLFMIQHFVLYPTSATA 98
R IGW+I LF SG + S+LQL++D A+ NDW GI GN +KF LG SI FD++F++QH++LY ++ A
Sbjct: 192 RKSTIGWSIITI---------LFDLSGGILSLLQLVIDSALENDWSGITGNPVKFLLGNVSIFFDIIFIVQHYILYKNASEA 264 The following BLAST results are available for this feature:
BLAST of EWM30339.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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