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Properties
| Property Name | Value |
|---|
| Product | nuclear transport |
| Orig transcript id | gnl|cribi|Naga_100010g44.6112.mrna |
| Orig protein id | gnl|cribi|Naga_100010g44.6112 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:533053..534229 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3488 ID=rna3488|Name=rna3488|organism=Nannochloropsis gaditana|type=mRNA|length=2123bp
AGGAATGTGGGGGGAAATTCACGGTCCTTATTTTGGGATGTCACTTGTAG
CTAAGTCCTCCGAAATGATGCATAATCCCTCCTCTAACTCCCCTTAAATC
TCTTCGGCAACAGGCGCCCTCCTTCCCAGGCACTCACCTCTCTCAACATC
CTCTCGATCCGACCTACCGGACGCTTGCTGCTACGGGATGTTTTCGAGTC
GACAAGTTGTCGGTCATGGCAACGATGGTGGAGTTCCTGTGAGCGCAGGC
GAGGCTGGTCGGCTGCTTTCCGGCAGCACGACGCAGACTATTGGTGGCAC
TTTTAATTCTGAGACACATCTGCAACAGCCGCCTCAAAAACAGCTGCATC
ACGTAATAAAGGATAGAAATAGTCCTACTTTTTATCAGAAACGCTCTCGT
CTCGTGTATCTGCCCCGAGTGGGTCCCCTGGAGCGGACGATGAAGTGGGC
ACTAACAGGTTTCGCCATTTATCTAGCCTTAACTTTCCTGGGGGTTGTAT
TCCTCGTGCTAAAGAGCCTGGAATTTGATAAATTGCCTCCTTTTGCTCGC
ACGGGCTTAATTTTGAAAGGTTACTGGCTGATTTTTACCCCTTTCTGGGC
CGCCGACCTCGTGGCTTGGATGGTGGTGCTTTGGGCCTTGCATTGGACTT
GCTCGTTGCGCACTAGCGGTGTACAGCATGAAAGTCGAATTATGGCCCCT
TCGTCTCATAGAGAAGCTCAGAAGACTTTAAGTACAGAAATGTTGCCCTT
GTTCCAGATAGTGATGCGTGCGCTTCTTAATGCAACACCATTCTTACTGT
GCATCACCGCGGCGCACATTTTACTCTTCATTTTCCTGCAGAGCGGAGGA
GGCAATTTTGGGCGACCATGGGTGTCTTTGTGGTTGGCAATTTTGCCTAT
TGTCTTGTGGGAAATGCTTGCATTAATAAGCGCGATATGTTTAAGGACGG
GATCCTTTTCCAAAGCGTTGGGTTGGCTACTGATACTCTTCGCTACTTTG
ATGGTCGGCCTGCGCTTTTCTTCGCCGCCCTTCCCCTTATCAAGCATCCC
CTGCATACGAGCTGCGCATAATGCACCTCTATGGGTGACATTTACACCGT
TTTGGGCGCTGGAAATCCTATTACTCGCCACATTGGTGTACGTGTCCATT
CAAGCTTGTTGTGCCCGGCGTTATCGCCTTTCTTCCCAGCATGTATCCTG
CATCATTCTATACACCAGCAGTCTTGGATTTTTGGCATTGGCCTCTGTAA
TGTTTGCCTGGCGACACGGGACCTGGGAATCAGGACTAAATCACGCATTG
CGTCTTCAAAACTTCTCCGACACGCTTTCGGGCATTGCCACCTTGTGCGC
CGTGGGCTTTGCGGAGCTTGGATTTTATCTTGTAGCAGCCGACGAAGTTG
AGCATTTGACTACGAGTCATGGCTACGAGGACCCCATGCCCTTGAGTCGA
ACAGCTCGCGGATGGGAGCCAACAGGAGCGCGTGTTTCGAACTGGCTGTT
GCTGGGTCGCCTAGAGGAGACGGCCCGCCTCATGCGCCGCGGTGGGTTGG
CTGGAACGAGTGGTAGCACAACCGCTGCAGCTGGGCGAGGGCTGTCAGGT
GTAGGCGTGAATATGACAAGGAATTCACCCCTGCGCGATTACCAAGGATA
CAGTGGACGGGAGGGTCGTGAGCTGCGGCGAAGTAATTCGGGATCCTACG
CTGACCTCTATGACGATTTGTAGCGACAAATACAGATTGGAAGGATATTC
CTGGTTTTTATGGGAGGGACGATCCGATGCCTGCTAGTGGACACGGTTGA
CAAAGCAGGTCTCGGGATATGTTTTGTCGCTCGCAGCAAAAAGTTGAATG
GCGGGTGCTGCTTGGAAAAGCACACAGATGAGAGGGAGAGAGCGGTATGT
ACTCAAATTTTGAGAAACTTTTGTAAAGTAGAAAAGGACACGTCCGAAAA
AAATCAGCGAGAGAACGGTAAAAGAAGAGCGCTTTGTTCAGATCATGCTT
TTCCCTACTCTGGTGCACACCATCTGCTCGCCAGTATCGAACGAGTCAGT
TTCAATTAGTGTTCCGTCTTCAAATCGGCAAAAAGATCCTAGAATGTGAC
GTCGTTCAAGTTTGAGGCATGAT back to topprotein sequence of rna3488 >rna3488-protein ID=rna3488-protein|Name=rna3488|organism=Nannochloropsis gaditana|type=polypeptide|length=121bp
MSADEIAGAFAQHYYGTLDSNIAGLGALYRDASMLTFEGQQFMGGTNISQ
KMAGLGKLVHNVQRFDVQPSLDPSNLIIAVVGQVKLDGQENPLHFSEFFQ
LVASSPGQYYIHNQIFRLNYA back to topmRNA from alignment at CM002461.1:533053..534229- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3488 ID=rna3488|Name=rna3488|organism=Nannochloropsis gaditana|type=mRNA|length=1177bp|location=Sequence derived from alignment at CM002461.1:533053..534229- (Nannochloropsis gaditana)
ACGACTTGTGCGCATTGTCTGCCCTGATCTGCTGTGCTCGAGCTTATGTT
CTCCAGAGGACGTCTTCCCGGCTAGTGCAGACTTCAGGAAGAGCTTGACG
ATATACGCTTGTTGTGTATATCATATTTACATGCCTTACTGCTTTTTGGT
CGTCGGTCTCCTTCTCGAAGGCGCGGCGTAGCTGTCTTTCATCCTTCCTC
CCGCCATTACACATTTTACAGGGGCGTTTGAGCACCAAATTGAGTGCGTA
CAAGCGAATTTAAGCTAGGAACAGTGTGAATCTGTGCGATGTCGGCTGAT
GAAATTGCGGGGGCCTTTGCACAGCACTACTACGGCACGCTGGACAGCAA
TATCGCAGGGTTAGGAGCATTATACGTAAGTCACCCGGGAAGAATGGAAA
GCTTTCGTCAATGAGGATGAGAGTAGACATACACATCGTCATATATTAAG
GTGTAGGTTTGTATCTTTACAAGTGTGAGATCTCTTTTTGAATTTTTCGT
GTCCTTCCCGCCTGAGGCGCTTTAAGACTGGTGCAGAGTTCTAGGCTTGG
AATTGGATGCAGGTGCTGGCGATTCCCTTTTGTGTATCCGTGGGAAGTCT
GCCCTTTCTTCATCTTACTCAAACCGTTCAGTAGTTGATCATGCTAGGGC
TGCTCAAGGGTCGCAATAGGTCTTATACTTTCTTCGTCACCGGAAATAAC
TTCGTTTTTCCTTCGACATCAACGTACCCCAGCGTGACGCATCTATGCTC
ACATTCGAAGGCCAGCAGTTCATGGGAGGAACCAATATCTCGCAGAAGAT
GGCTGGTTTGGGGAAGTTGGTGCACAATGTGCAGCGGTTTGATGTACAGC
CGTCGTTGGACCCTTCAAATCTGATCATAGCTGTTGTGGGTCAGGTTAAG
CTGGACGGACAGGAGAATCCGCTTCATTTTTCTGAATTTTTCCAATTGGT
GGCATCTTCACCTGGCCAGTATTACATTCATAATCAGATATTCAGGCTCA
ATTACGCCTGAGCACGTAACCCACAATCATGCCTCAAACTTGAACGACGT
CACATTCTAGGATCTTTTTGCCGATTTGAAGACGGAACACTAATTGAAAC
TGACTCGTTCGATACTGGCGAGCAGATGGTGTGCACCAGAGTAGGGAAAA
GCATGATCTGAACAAAGCGCTCTTCTT back to topCoding sequence (CDS) from alignment at CM002461.1:533053..534229- >rna3488 ID=rna3488|Name=rna3488|organism=Nannochloropsis gaditana|type=CDS|length=732bp|location=Sequence derived from alignment at CM002461.1:533053..534229- (Nannochloropsis gaditana)
CGTGACGCATCTATGCTCACATTCGAAGGCCAGCAGTTCATGGGAGGAAC
CAATATCTCGCAGAAGATGGCTGGTTTGGGGAAGTTGGTGCACAATGTGC
AGCGGTTTGATGTACAGCCGTCGTTGGACCCTTCAAATCTGATCATAGCT
GTTGTGGGTCAGGTTAAGCTGGACGGACAGGAGAATCCGCTTCATTTTTC
TGAATTTTTCCAATTGGTGGCATCTTCACCTGGCCAGTATTACATTCATA
ATCAGATATTCAGGCTCAATTACGCCTGAATGTCGGCTGATGAAATTGCG
GGGGCCTTTGCACAGCACTACTACGGCACGCTGGACAGCAATATCGCAGG
GTTAGGAGCATTATACCGTGACGCATCTATGCTCACATTCGAAGGCCAGC
AGTTCATGGGAGGAACCAATATCTCGCAGAAGATGGCTGGTTTGGGGAAG
TTGGTGCACAATGTGCAGCGGTTTGATGTACAGCCGTCGTTGGACCCTTC
AAATCTGATCATAGCTGTTGTGGGTCAGGTTAAGCTGGACGGACAGGAGA
ATCCGCTTCATTTTTCTGAATTTTTCCAATTGGTGGCATCTTCACCTGGC
CAGTATTACATTCATAATCAGATATTCAGGCTCAATTACGCCTGAATGTC
GGCTGATGAAATTGCGGGGGCCTTTGCACAGCACTACTACGGCACGCTGG
ACAGCAATATCGCAGGGTTAGGAGCATTATAC back to top
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