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Properties
| Property Name | Value |
|---|
| Product | dna repair protein |
| Orig transcript id | gnl|cribi|Naga_100003g151.1726.mrna |
| Orig protein id | gnl|cribi|Naga_100003g151.1726 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:848194..850328 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna345 ID=rna345|Name=rna345|organism=Nannochloropsis gaditana|type=mRNA|length=1904bp
GAGCGGTGAGGGGCCCAGGTGGCCAAATGCAGCAACTATGCGTGACAGCC
AAGTGAGCATTTATTTCTGTCCATTGTTAAGGGTGCTTTCAATTTCATTG
CACTAATTTGCCGTACAAGACAAGTCAGGACTCCATACAGGTGGTGAAAG
TCAGTCTGTCAAGACTTTCCGCTGATGCTTATTTTCAAGCTACCGCTGGA
AGATGTTCTCTCTCACCCTGACCTTGCCAAGCGTTACTGTCTCCTGGGAT
CCGTGCAACTTCAGACTTCAGAGTCGAAGGCTCTGCCATCCATAGTCCCT
GAAGGATTGCTGCAGCGTCATAATATAGTCCTGGGGCCGATTACCCTTGG
TCAAGTGGACGAAGTGCGGCCTTGGCTTCACAATGGCGCTCGGAAGGCAT
TTTTCGCTGTGCCAAGGGAAACAGTTGTCGAGCACTTGAAAATTCAGCTC
GCTGGTCTTCCTCGTGAGCGTGTGGGTGTCAGCGTTGTATTGGAAGGCAA
GGACGCGGTAGAAGCGGATGCCATGGCTGGCGGTCAATTTTTAGAGCACA
TCGCGAAATTGTACGAAGTTGCATCATCTGTGCAGATAAATTTTGGGAAT
GACTCAATTAAAAGTGAGGAATCCCTAATATGCTTGGCAAACGCTATCCA
TCATGGCATCAAATGCCAAGGAGCGACATCTCTCTCTCAGGAACTGGTCG
TAGAGGCACCCGCTTCGATGCAGTGGTCCGCTGAAGGCATCAAAGCGCTA
AACAAAGAGAGTATACGGGTCTTGCTTCATGGGGCTCCTTCAGAAATAAT
AAATTGTCATCTTGTCGCAGGTTTGAAGGAGCCGGTGCTTCCCTTGAAAC
AAGCAGCAGTGGACGGCGTGGGTGCTTTCCTTGCTTGCCTGCGGACAGAT
CGGCCCGATGGGCTCTTTACAACAGTCGTCGTTGACGAATGTAATGTGGC
TTTGGGACTTGTCTACTCAAGCGCGGAAAGTGTGCGGACGTCGGTGGCCG
AGCTTCGTGGAGTCTATTTTTCACGTTCCCGTGGCGGTCTTTGGCGCAAA
GGTGATTCAAGCGGAGCTTTGCAGGAATTAGTGGGTTTAGACGTGGATTG
TGACTCAGATGCACTGCGTTTTGTGGTGCGACAACGCGGAAAGCCTCCGG
TAAGTGCCCAGAAAGCTGCAAATGGTTATCGAAAAGGACTGAACCTTACG
ATTGCTGCAGCGCTAAAGTACGGTTTATTCCCTCATGTGTAGGCCTTTTG
TCACCTAAACCGGCGTAGTTGCTGGCAAGAGGACAGGGGTTTAGGCGCGT
TACAACGCACGTTAGAAAATCGCTTGCATCAGGCTGTCGAGGGCTCTTAC
ACTCAAAAGCTTTTTCGGGACCGCGATTTACTGCGTCACAAATTAGTCGA
GGAAGCTCAGGAACTTAGCGAGGCTAAGGAGTGCGAAGACGTCGCTGCTG
AAGCAGCAGATGTATTCTATTTTGCCATGGTGCGTTGTGTGGCTGCGGGG
GTGACTTTGGAAGACATAGAGCGTCATTTAGATGCACGAACACTCAAGCT
TCAGAGAAGACCAGGCAACACCAAAGCACACCGCATCGATGCCGCAGAAA
AGATCCTATCGAGTCCTCTCCCGTCACGCACATGAAGCTATGTGTCAATT
TAATATTGGTATGAAGTAAGATTGTGGTCAGAAGGAAATTTTGACACGAT
AAGAAGCTGTCCGGTCCGAGCAACAGTGTTCGGTAGTCACACACAAGTCT
GTTGAAGCCATCACAAATGTGGGAAGCAAGAAATAATTTTAATTACAATT
GCATCTTCTACTTTATGTGTTCAGCTAAAGATGCGGGTCGGGTCGTGTTT
GTAGACAACGGGCTTTCAGTATGAGGGACTTTCAGCTTTGGGCGACGCCC
GCAC back to topprotein sequence of rna345 >rna345-protein ID=rna345-protein|Name=rna345|organism=Nannochloropsis gaditana|type=polypeptide|length=632bp
MFTAGFSKIRLGHVLTVSFSHTCSDSVTKQAADKAKLLQLHLALPSTTRE
VNCQALYMAEGNLDMPEDWLRAGSLGAQLARFESHLRCPICAKFLETAMA
AECGHTFCSICVRDWLGRGEDHQNCPQCKANRKPNIVLYKDRLKPCMSLD
SAARGFKELRGALLRAVFEAGGCDAKIEEEARQRTGRNADSDQNGRRALD
DSHQRGLDHFWASKQWSGALKRHPGYHNVKEKGLRQELWAMGMMTSGKKD
DLVLRHQTFIKLAEAEADKVVLGRPTRTREQVVKEVEEKVRARSNVGTGS
MARAPVNVETLSQHEGYKIMIKEMRRRQKEQKRRQDGIKLTSDDDALEDS
INSNTCKRKDIELERLETKEWKPERGVQKAKYAAAIAICGANRGNEQDLG
GSQNGDVRQTKSDALRTDLSSPSGHQLVGKDDDEDVMHLQTVKSETSRSI
DMKRRQYSKDDEVNYKQRRKSVNTLTACASRWICQACTLNNAGHALNCAA
CNVPRRAFITSTTSMKTVKAVQENLLHEALQHKSRQVSDAMVIFDEGVRQ
SAGKAMAGVDNLGVRLRRVKPASGGLAGFSYQISDEVSQAQHEDEEITEW
EGDSVKSEEYDKGWNENSMRVRASPKAESPSY back to topmRNA from alignment at CM002455.1:848194..850328- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna345 ID=rna345|Name=rna345|organism=Nannochloropsis gaditana|type=mRNA|length=2135bp|location=Sequence derived from alignment at CM002455.1:848194..850328- (Nannochloropsis gaditana)
ATGTTTACAGCTGGATTTTCCAAGATTCGGTTGGGCCACGTGCTTACGGT
TTCTTTCTCACACACATGTTCAGACAGTGTCACCAAACAGGCGGCGGACA
AGGCAAAACTTTTGCAACTCCATCTTGCCTTACCTTCTACCACCAGGGAG
GTAAATTGCCAGGCACTTTACATGGCAGAAGGAAACCTGGACATGCCTGA
GGACTGGCTGCGGGCAGGGAGTCTTGGTGCGCAGTTGGCCCGATTTGAGT
CGCATTTACGGTGTCCGATATGCGCAAAGTTCTTGGAGACAGCCATGGCA
GCGGAGTGCGGGTATGTTCAGGAGGAGCAGGAAAGGGAGTAAGACAAGGG
CAGATTTCAGCGGTCAGAGGTGTAGAGGTACTAGAGTATATCTAAAAGTG
ACGACTCTTTGTATGATGTGTGTCATTTTCGAACGCAAATGGTACCTGTC
AGGCACACATTTTGCTCTATTTGCGTTCGGGACTGGCTAGGCCGTGGGGA
AGACCACCAGAACTGCCCGCAGTGCAAGGCAAACCGCAAACCAAATATCG
TCCTGTACAAAGATCGACTGAAGCCATGTATGAGCTTGGACAGCGCAGCT
CGAGGTTTTAAAGAGCTGCGAGGCGCGCTTTTGAGGGCAGTCTTCGAGGC
TGGTGGCTGCGACGCCAAAATCGAGGAAGAGGCGAGACAACGCACAGGTA
GAAACGCTGATAGTGATCAAAATGGTCGCCGGGCGCTTGATGACTCTCAC
CAGCGAGGATTGGATCATTTTTGGGCTTCCAAGCAGTGGAGCGGGGCACT
CAAGCGACACCCCGGATACCATAATGTGAAGGAAAAAGGACTCAGGCAAG
AATTATGGGCCATGGGTATGATGACTTCGGGCAAAAAGGACGATTTGGTC
TTGAGACACCAGACTTTCATCAAGCTGGCCGAAGCGGAGGCGGACAAGGT
AGTGCTTGGGAGGCCGACACGAACCCGAGAGCAAGTAGTCAAAGAGGTCG
AGGAAAAAGTGCGCGCTCGCTCCAACGTGGGCACTGGCAGTATGGCCCGA
GCACCTGTGAACGTGGAGACGTTATCGCAGCATGAAGGCTATAAGATCAT
GATTAAGGAAATGAGACGGCGACAGAAGGAACAGAAGCGGCGTCAGGACG
GTATAAAACTTACGAGCGATGACGATGCATTAGAAGATAGCATCAACTCA
AACACATGTAAAAGAAAGGATATAGAACTTGAGAGGCTCGAGACAAAGGA
ATGGAAACCAGAAAGGGGCGTTCAGAAAGCAAAGTACGCAGCTGCAATCG
CGATTTGCGGAGCAAACAGGGGAAATGAGCAGGATCTGGGAGGAAGTCAA
AACGGTGATGTCCGACAAACGAAATCCGATGCTCTACGAACGGATTTGAG
CTCTCCGTCCGGTCATCAGCTCGTAGGAAAAGATGATGATGAGGATGTCA
TGCATCTGCAAACGGTGAAGAGCGAAACTTCGAGGAGCATCGACATGAAG
CGGCGTCAATATTCTAAAGATGATGAAGTCAATTACAAGCAACGGAGGAA
ATCGGTGAATACTTTGACGGCATGCGCATCGAGATGGATATGCCAAGCAT
GTACGTTGAATAATGCAGGACATGCTTTAAATTGTGCTGCATGCAACGTG
CCTCGACGTGCGTTCATCACAAGCACGACAAGCATGAAGACTGTCAAGGC
CGTCCAGGAGAATTTACTTCATGAGGCCCTCCAGCACAAGTCCCGGCAAG
TTTCGGATGCCATGGTCATTTTTGACGAAGGAGTGCGCCAATCTGCAGGC
AAAGCGATGGCAGGTGTGGACAATCTGGGGGTACGTTTACGTCGCGTAAA
ACCAGCTTCGGGTGGGTTGGCTGGTTTTTCGTATCAGATATCGGATGAAG
TAAGTCAAGCCCAACACGAAGATGAAGAAATTACTGAATGGGAGGGTGAT
TCTGTAAAGAGTGAAGAATACGATAAGGGCTGGAACGAGAACAGCATGCG
TGTGCGGGCGTCGCCCAAAGCTGAAAGTCCCTCATACTGAAAGCCCGTTG
TCTACAAACACGACCCGACCCGCATCTTTAGCTGAACACATAAAGTAGAA
GATGCAATTGTAATTAAAATTATTTCTTGCTTCCC back to topCoding sequence (CDS) from alignment at CM002455.1:848194..850328- >rna345 ID=rna345|Name=rna345|organism=Nannochloropsis gaditana|type=CDS|length=3798bp|location=Sequence derived from alignment at CM002455.1:848194..850328- (Nannochloropsis gaditana)
GCACACATTTTGCTCTATTTGCGTTCGGGACTGGCTAGGCCGTGGGGAAG
ACCACCAGAACTGCCCGCAGTGCAAGGCAAACCGCAAACCAAATATCGTC
CTGTACAAAGATCGACTGAAGCCATGTATGAGCTTGGACAGCGCAGCTCG
AGGTTTTAAAGAGCTGCGAGGCGCGCTTTTGAGGGCAGTCTTCGAGGCTG
GTGGCTGCGACGCCAAAATCGAGGAAGAGGCGAGACAACGCACAGGTAGA
AACGCTGATAGTGATCAAAATGGTCGCCGGGCGCTTGATGACTCTCACCA
GCGAGGATTGGATCATTTTTGGGCTTCCAAGCAGTGGAGCGGGGCACTCA
AGCGACACCCCGGATACCATAATGTGAAGGAAAAAGGACTCAGGCAAGAA
TTATGGGCCATGGGTATGATGACTTCGGGCAAAAAGGACGATTTGGTCTT
GAGACACCAGACTTTCATCAAGCTGGCCGAAGCGGAGGCGGACAAGGTAG
TGCTTGGGAGGCCGACACGAACCCGAGAGCAAGTAGTCAAAGAGGTCGAG
GAAAAAGTGCGCGCTCGCTCCAACGTGGGCACTGGCAGTATGGCCCGAGC
ACCTGTGAACGTGGAGACGTTATCGCAGCATGAAGGCTATAAGATCATGA
TTAAGGAAATGAGACGGCGACAGAAGGAACAGAAGCGGCGTCAGGACGGT
ATAAAACTTACGAGCGATGACGATGCATTAGAAGATAGCATCAACTCAAA
CACATGTAAAAGAAAGGATATAGAACTTGAGAGGCTCGAGACAAAGGAAT
GGAAACCAGAAAGGGGCGTTCAGAAAGCAAAGTACGCAGCTGCAATCGCG
ATTTGCGGAGCAAACAGGGGAAATGAGCAGGATCTGGGAGGAAGTCAAAA
CGGTGATGTCCGACAAACGAAATCCGATGCTCTACGAACGGATTTGAGCT
CTCCGTCCGGTCATCAGCTCGTAGGAAAAGATGATGATGAGGATGTCATG
CATCTGCAAACGGTGAAGAGCGAAACTTCGAGGAGCATCGACATGAAGCG
GCGTCAATATTCTAAAGATGATGAAGTCAATTACAAGCAACGGAGGAAAT
CGGTGAATACTTTGACGGCATGCGCATCGAGATGGATATGCCAAGCATGT
ACGTTGAATAATGCAGGACATGCTTTAAATTGTGCTGCATGCAACGTGCC
TCGACGTGCGTTCATCACAAGCACGACAAGCATGAAGACTGTCAAGGCCG
TCCAGGAGAATTTACTTCATGAGGCCCTCCAGCACAAGTCCCGGCAAGTT
TCGGATGCCATGGTCATTTTTGACGAAGGAGTGCGCCAATCTGCAGGCAA
AGCGATGGCAGGTGTGGACAATCTGGGGGTACGTTTACGTCGCGTAAAAC
CAGCTTCGGGTGGGTTGGCTGGTTTTTCGTATCAGATATCGGATGAAGTA
AGTCAAGCCCAACACGAAGATGAAGAAATTACTGAATGGGAGGGTGATTC
TGTAAAGAGTGAAGAATACGATAAGGGCTGGAACGAGAACAGCATGCGTG
TGCGGGCGTCGCCCAAAGCTGAAAGTCCCTCATACTGAATGTTTACAGCT
GGATTTTCCAAGATTCGGTTGGGCCACGTGCTTACGGTTTCTTTCTCACA
CACATGTTCAGACAGTGTCACCAAACAGGCGGCGGACAAGGCAAAACTTT
TGCAACTCCATCTTGCCTTACCTTCTACCACCAGGGAGGTAAATTGCCAG
GCACTTTACATGGCAGAAGGAAACCTGGACATGCCTGAGGACTGGCTGCG
GGCAGGGAGTCTTGGTGCGCAGTTGGCCCGATTTGAGTCGCATTTACGGT
GTCCGATATGCGCAAAGTTCTTGGAGACAGCCATGGCAGCGGAGTGCGGG
CACACATTTTGCTCTATTTGCGTTCGGGACTGGCTAGGCCGTGGGGAAGA
CCACCAGAACTGCCCGCAGTGCAAGGCAAACCGCAAACCAAATATCGTCC
TGTACAAAGATCGACTGAAGCCATGTATGAGCTTGGACAGCGCAGCTCGA
GGTTTTAAAGAGCTGCGAGGCGCGCTTTTGAGGGCAGTCTTCGAGGCTGG
TGGCTGCGACGCCAAAATCGAGGAAGAGGCGAGACAACGCACAGGTAGAA
ACGCTGATAGTGATCAAAATGGTCGCCGGGCGCTTGATGACTCTCACCAG
CGAGGATTGGATCATTTTTGGGCTTCCAAGCAGTGGAGCGGGGCACTCAA
GCGACACCCCGGATACCATAATGTGAAGGAAAAAGGACTCAGGCAAGAAT
TATGGGCCATGGGTATGATGACTTCGGGCAAAAAGGACGATTTGGTCTTG
AGACACCAGACTTTCATCAAGCTGGCCGAAGCGGAGGCGGACAAGGTAGT
GCTTGGGAGGCCGACACGAACCCGAGAGCAAGTAGTCAAAGAGGTCGAGG
AAAAAGTGCGCGCTCGCTCCAACGTGGGCACTGGCAGTATGGCCCGAGCA
CCTGTGAACGTGGAGACGTTATCGCAGCATGAAGGCTATAAGATCATGAT
TAAGGAAATGAGACGGCGACAGAAGGAACAGAAGCGGCGTCAGGACGGTA
TAAAACTTACGAGCGATGACGATGCATTAGAAGATAGCATCAACTCAAAC
ACATGTAAAAGAAAGGATATAGAACTTGAGAGGCTCGAGACAAAGGAATG
GAAACCAGAAAGGGGCGTTCAGAAAGCAAAGTACGCAGCTGCAATCGCGA
TTTGCGGAGCAAACAGGGGAAATGAGCAGGATCTGGGAGGAAGTCAAAAC
GGTGATGTCCGACAAACGAAATCCGATGCTCTACGAACGGATTTGAGCTC
TCCGTCCGGTCATCAGCTCGTAGGAAAAGATGATGATGAGGATGTCATGC
ATCTGCAAACGGTGAAGAGCGAAACTTCGAGGAGCATCGACATGAAGCGG
CGTCAATATTCTAAAGATGATGAAGTCAATTACAAGCAACGGAGGAAATC
GGTGAATACTTTGACGGCATGCGCATCGAGATGGATATGCCAAGCATGTA
CGTTGAATAATGCAGGACATGCTTTAAATTGTGCTGCATGCAACGTGCCT
CGACGTGCGTTCATCACAAGCACGACAAGCATGAAGACTGTCAAGGCCGT
CCAGGAGAATTTACTTCATGAGGCCCTCCAGCACAAGTCCCGGCAAGTTT
CGGATGCCATGGTCATTTTTGACGAAGGAGTGCGCCAATCTGCAGGCAAA
GCGATGGCAGGTGTGGACAATCTGGGGGTACGTTTACGTCGCGTAAAACC
AGCTTCGGGTGGGTTGGCTGGTTTTTCGTATCAGATATCGGATGAAGTAA
GTCAAGCCCAACACGAAGATGAAGAAATTACTGAATGGGAGGGTGATTCT
GTAAAGAGTGAAGAATACGATAAGGGCTGGAACGAGAACAGCATGCGTGT
GCGGGCGTCGCCCAAAGCTGAAAGTCCCTCATACTGAATGTTTACAGCTG
GATTTTCCAAGATTCGGTTGGGCCACGTGCTTACGGTTTCTTTCTCACAC
ACATGTTCAGACAGTGTCACCAAACAGGCGGCGGACAAGGCAAAACTTTT
GCAACTCCATCTTGCCTTACCTTCTACCACCAGGGAGGTAAATTGCCAGG
CACTTTACATGGCAGAAGGAAACCTGGACATGCCTGAGGACTGGCTGCGG
GCAGGGAGTCTTGGTGCGCAGTTGGCCCGATTTGAGTCGCATTTACGGTG
TCCGATATGCGCAAAGTTCTTGGAGACAGCCATGGCAGCGGAGTGCGG back to top
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