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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF1772 |
| Orig transcript id | gnl|cribi|Naga_100038g37.7707.mrna |
| Orig protein id | gnl|cribi|Naga_100038g37.7707 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:422755..423688 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3439 ID=rna3439|Name=rna3439|organism=Nannochloropsis gaditana|type=mRNA|length=423bp
CTCACAGCCTCCTGCCCCCACTGAGGCCACAATGGTGAAGCTGAATCGCA
TGGTGTTAACTCAAGGATTTGGCTTCATTCTTCTGCCAGTACTTGCGGTT
GCTCTGACAAAAATATATGGCGCGAGCCCTGAGGAGACAGAGAAACAGCT
CGAGCGGATGGCCGTGGAGGAGCAACACAGGAGCCGGAGCGCGGGGAAAG
GCGGGGATTCAGACGTGCAGGTCATGCATGATTTCATTCGGAAGCAGGCT
GTCAACCAACAAGCCGACTATAGCGCCATCTTGCAATCGGGGCGGGGGAA
AGTGAAGAGACAGAGGGACATCGAGCCCTCGGCGTGAGGAGGGCGCCGAC
CAAGTGGCGGGGAACGAGGACGGGAGGTAGTGAGACGGGCGCTAATTTTA
AAAAAAAGATTGTACATGGTGTC back to topprotein sequence of rna3439 >rna3439-protein ID=rna3439-protein|Name=rna3439|organism=Nannochloropsis gaditana|type=polypeptide|length=233bp
MRWPAFKDRDAGGRFILEAATFASSALFAGAALYISLVEHPARKTLAASS
LDVPKSKGKAIKKSAIKSAVLQWRESYQRAAPLQVFYALVAGVGGMCNTF
VLKEAAAWAWGGGLVAMNVPFTLLCLMPINKELGKRAEMAELEQETRGTS
DREEETKVEEEEVEEADPVSRRVTFCLGSWSCSGLPSTKHLLRLWGQLHA
VRAVLGLSGFLVLTAHILSVAHSRRASKVMIYG back to topmRNA from alignment at CM002461.1:422755..423688+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3439 ID=rna3439|Name=rna3439|organism=Nannochloropsis gaditana|type=mRNA|length=934bp|location=Sequence derived from alignment at CM002461.1:422755..423688+ (Nannochloropsis gaditana)
CCCAGCGCTGTTCTGTTTCCCTTGGCCTGCATGCAGGGGCAGTCAGAACA
CTCTTTGTATTATAAGATTACGTGAGGACATGTGCACGCATTGTCAGGAT
CAATGGAGGGCTGAGCTTCAACCTTCCACTTACCTCTCTCTCCTAAGCCA
GGTTCTTGCATGCGTTGGCCGGCATTCAAAGACCGCGATGCAGGAGGGCG
CTTCATACTAGAAGCAGCTACCTTCGCAAGCTCCGCCCTCTTTGCTGGCG
CCGCTCTGTACATCTCTCTGGTGGAGCACCCTGCTCGTAAAACCCTTGCT
GCATCCAGTTTGGATGTTCCGAAATCTAAAGGGAAGGCAATCAAAAAAAG
TGCCATCAAGAGCGCAGTTTTGCAATGGCGCGAATCATATCAACGGGCCG
CTCCACTTCAAGTCTTTTATGCGCTTGTGGCCGGTGTCGGTGGTATGTGC
AACACTTTTGTGCTCAAGGAGGCTGCGGCCTGGGCATGGGGTGGGGGGCT
CGTGGCCATGAACGTGCCTTTCACTCTCCTCTGCCTCATGCCGATCAACA
AAGAGCTTGGAAAGCGTGCGGAGATGGCAGAGTTGGAACAAGAGACCCGC
GGGACGTCGGATCGCGAAGAAGAGacaaaagtggaggaggaagaggtaga
ggaggccgACCCTGTTTCTAGACGCGTCACCTTCTGCCTGGGCTCTTGGT
CCTGCTCAGGTCTGCCATCCACCAAGCACCTTCTCCGGCTGTGGGGCCAA
CTGCATGCTGTTCGTGCTGTCCTGGGCCTCAGCGGCTTTTTGGTCCTCAC
TGCTCATATTCTCTCCGTCGCGCACTCCCGCCGAGCTAGCAAGGTGATGA
TTTATgggtgaaggggggggcCATGTTCACAGACCGATTGGCGCAGAGGA
GCATCTTAAAGAAAATGAAAACAACATATTTCTA back to topCoding sequence (CDS) from alignment at CM002461.1:422755..423688+ >rna3439 ID=rna3439|Name=rna3439|organism=Nannochloropsis gaditana|type=CDS|length=702bp|location=Sequence derived from alignment at CM002461.1:422755..423688+ (Nannochloropsis gaditana)
ATGCGTTGGCCGGCATTCAAAGACCGCGATGCAGGAGGGCGCTTCATACT
AGAAGCAGCTACCTTCGCAAGCTCCGCCCTCTTTGCTGGCGCCGCTCTGT
ACATCTCTCTGGTGGAGCACCCTGCTCGTAAAACCCTTGCTGCATCCAGT
TTGGATGTTCCGAAATCTAAAGGGAAGGCAATCAAAAAAAGTGCCATCAA
GAGCGCAGTTTTGCAATGGCGCGAATCATATCAACGGGCCGCTCCACTTC
AAGTCTTTTATGCGCTTGTGGCCGGTGTCGGTGGTATGTGCAACACTTTT
GTGCTCAAGGAGGCTGCGGCCTGGGCATGGGGTGGGGGGCTCGTGGCCAT
GAACGTGCCTTTCACTCTCCTCTGCCTCATGCCGATCAACAAAGAGCTTG
GAAAGCGTGCGGAGATGGCAGAGTTGGAACAAGAGACCCGCGGGACGTCG
GATCGCGAAGAAGAGacaaaagtggaggaggaagaggtagaggaggccgA
CCCTGTTTCTAGACGCGTCACCTTCTGCCTGGGCTCTTGGTCCTGCTCAG
GTCTGCCATCCACCAAGCACCTTCTCCGGCTGTGGGGCCAACTGCATGCT
GTTCGTGCTGTCCTGGGCCTCAGCGGCTTTTTGGTCCTCACTGCTCATAT
TCTCTCCGTCGCGCACTCCCGCCGAGCTAGCAAGGTGATGATTTATgggt
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