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Properties
| Property Name | Value |
|---|
| Product | SAC3/GANP/Nin1/mts3/eIF-3 p25 |
| Orig transcript id | gnl|cribi|Naga_100038g28.7698.mrna |
| Orig protein id | gnl|cribi|Naga_100038g28.7698 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:401265..403609 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3431 ID=rna3431|Name=rna3431|organism=Nannochloropsis gaditana|type=mRNA|length=1526bp
GCCGACCGTCTCCTCAAGGCCGTTAAGGCCAGCCGTTGCCCGGGACAGTC
GTGTCGGTCTCCACACAGCCGCCGCCGCATACGCGCCGCATCATGCCTTT
CGTGTCCCGGACATGCGGACTTGTGTATTTCATATATTCGATTTTCTACG
ACTCGGTGGTGAGTGTTGCTTACTTGCGTCCGGCATGTGTGGGAACCTAA
AGTAATTCGTTGCTGCTTTCATGGGCCCTCTAGCTTCATGGCTCTAGGTG
CCATCTCTATCCTTCTTCTCTGTATTTCCTCCTCCAGAGGGTATTTCCTT
CTTAATGCTTCTCCTTTGCTCCCATGTTCATTCGCTTGCCTTATTCAACG
TATCTATTCTCCCACTCGTACGTTTTATTCTTTAATGACAAATGTAAGGA
CATTTAAAATGTCCCTCAACGGAATTTCTCACATTCCGAAGTTTTGACAG
AGGACCCTTATTTGACAAGTGTGTTTGTCCTTCGGTACCTTAAGCAAAAA
TGGCGGAGCGTAAAGCCTCAGGCAACATTCATTTTCTAGGTGTAGCTCGT
TTCCAAGACCGTGCAATCGTCGCCAGTCATGCCTACAACACAGTCATTGA
CCTGACAGGCGTCAAGGAGGTGCTTAAGAGTGACCAGCTTAGTGTCCGAC
CGGGTGTGCATTTCTCCTTTGCCTCGGGTGGCTCCTCATGGCACCTCATG
TCCGATGTGGAGGGAAGAATTTTTATTCTTATATCCGAGCGCACGTATCC
CGTACGGGCCGCCCATGCCTGTTTAGAGGAATTCCAGAGATCGTTTTTGG
CCAAGACGGGGACGAAGAGTCTAGAAGTGAAAGAAAAAGGTCTGGATAAG
AGCTCTGGGGAGATGCTGCGAAAATTGTGCGAGAAATACGACAACCTCGC
TGAAGTGGATAAACTGGCAGCGGTCATGAATAAGGTGGACGCGGTCAAGC
TCGTCCTGCAGGAAAACGTCCAGGTGGCCCTGGCGAATTGTGTTGCCTTG
GACAACATCGAGAAGGCGGCTGAGGATCTGCAGGCTCAAGCCGGCATGTT
CAAGAGAAACGCCACTACTCTGAAGAAACAGATGTGCTGGAAACAGCTCC
GAATGAAAATGGTTATGGGACTGGCAATCCTGGCGATCCTGCTTGTGATT
ATCATTCCCATTGCCGTTGCCAGCAAGCGGATGCACGATGCTCACAAGAG
AAATAAGTAAAGTGCATTCAAGTTCGAATGGAAGAGAAGGGGAACGCTGG
AAGGAAACGGGTAGGATTACCCGTCATGGGGGGGAAATGTCCAGGCAACG
GTGTGAATCGTGGCGTTGATTATCCATGCGCGTGAGAAGGAAGAGGCGGA
TGGTGGTTGTAAGATATTTATAGGATCCTGGAAGTAAGTGTGCGAGGTTG
TTGGCAATGATGTTTTCGAACGAAGACCGTGGGGCACTGTCCGTCTCGAG
TTTGCATCGCTGTTCGTCCGCCGGCTACGAACGGAAGACGCCAAAAAATA
AAAAATACCGTATTGAGCAGAATTTT back to topprotein sequence of rna3431 >rna3431-protein ID=rna3431-protein|Name=rna3431|organism=Nannochloropsis gaditana|type=polypeptide|length=365bp
MSDRFMAVRKDIIVQGLAGSGAQAIYKRIIRFHILFDYLLTEQVPPVFDA
HMGLNAVRSGLATLLDFFQNAHKHGRMADSENEVEPHLDEFLAYYTLLQL
HDVLSSGERREAGPCDGDGWTKLFLHTYRVLEETELKSCENSKTKLRRRD
FSLPRTQWALQYAKALAAGNWARFHRLCMNWDLVLREEDRTFHVLARCLI
FKLFPITRRRSMELWSKVMFQKEKMSVDEVQRLLCFGNAKQTFDFMRLFG
LELSCYCTCTSSDMKEGGRKQNAWERPESSSTATVTGCSQKKGINCHLYY
KPRDALLHSPSIAQTYEDRQNIQATLCPRQDSWVLDAANMGEENLREGKI
ATEKLQELWKGMKKK back to topmRNA from alignment at CM002461.1:401265..403609- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3431 ID=rna3431|Name=rna3431|organism=Nannochloropsis gaditana|type=mRNA|length=2345bp|location=Sequence derived from alignment at CM002461.1:401265..403609- (Nannochloropsis gaditana)
AACGTGAACGCTTGTGTGGGCGAATGTCTGCTTCCCCACGACATGGAACA
AAATATAGGCTGCTCTCTTCATCTCCTTGCAGGCCGGTGTCGACGTACGA
AAGGGCGCCCACAAAGCGGACAACAACCTCGGGCACAAGCTCTCTCCCTT
TGCCCTCTCTCGCCTCGCCCTTCGCAGGCTCGAGGAGGCCCTGAGAGGGA
GGTGCCTATTCCATCATATCAGCTACCGTGGCCCTTCGACTCGAGTCTCG
AGGGCTTCGAGGGGTACCTTTTCCATCATATCATCCCGACCAAGGGACCT
TTCCCCTCACATCATGGTGCTTTAGTATGCTTGACCTCCCGACTACAAGC
CCGTGCAGTTCACACTCATGCAACATTTCACGACGCAATACGTCATCCAT
GACAAGACAGAAAGTTTGTGGGTTCAAGAAATAGGGTGCGCTTTATCCCT
GCTATTTTCGCAAATGAAAGTAAGTTAAAAGGTCAAACATGTTTTGACGA
AAAGCTTTAGGCACTAACTTTTACGTCCGACGTGCACATCAAGGGGAGAT
GTGAGGCTATGTGTAGTATACAAGAGCAAGAAGAACGACAAAAACAGCAC
GATATAAGCCAATTTGAGGCAACGGATGCGACAAGGATGCTGCGGCGGCA
TTTGAGGAAAATGGACCCCGAGGTATATTGAGAAAATGAAAGTAGAAACA
TTTTCTTTTGTCGGACTCACACTGATCTTTTCCTCACAACCTCAACCTCC
TGGAAGAGAGCTGTAAAGCGGTATCAACGGGCCGCTGATGGACGTGGCGA
GACAGCCGGTGACGTACGTCCCCTCAAATGGTTAGAGCGAACTGTGGCGC
ACTTGTGGAGTGTTGCGCTGAGCGTGTTAGAAAGCCAGGGTCAGGAGAAA
GCGCCGAAAAAAGAGGATCTTTTGCGACTTGTGGAGCTGTATGACTTCAT
GAGTGATCGGTTTATGGCTGTGCGAAAGGACATCATAGTGCAAGGCTTGG
CGGGCTCCGGTGCACAGGCCATCTACAAACGCATCATTCGTTTCCACATT
TTGTTCGACTACCTTTTGACAGAGCAGGTATGAGGCTTGAGAAGACTTGC
GTGCTCGATACTCTTTTACTCTTAGAATCGATTACAGCACATGCCAAAAT
TGTCATACTGCAAACCCACACAGGTGCCACCAGTCTTTGATGCGCACATG
GGGTACGTGGACACTCTTTCACTTCAGGACGGAAAAAAAAATCTATGTAT
CTATCAGCCAAATCCTTAGTCACTCTCTCACTCATTCCTCCTTTTCTACA
ATATAGACTGAATGCTGTTAGATCTGGGCTTGCGACGCTGCTAGACTTTT
TCCAAAATGTAAAGCGAATCCGACGGGGGGCATGTCAGCTGTAGTCCGTT
CCTACACTCATCACACTCCATTTCCACGTCCTTTCTCATGCAGGCACATA
AACATGGGCGAATGGCTGACTCTGAAAACGAAGTTGAACCTCATTTGGAC
GAGTTTCTCGCTTATTACACATTACTTCAACTGCACGATGTCCTCTCGAG
TGGGGAAAGACGGGAAGCTGGACCCTGTGACGGCGACGGGTGGACAAAGC
TGTTTTTACATACCTATCGGGTCCTAGAGGAGACAGAGCTAAAATCTTGC
GAAAATTCCAAGACGAAACTGCGAAGACGAGATTTTTCACTTCCCAGAAC
GCAATGGGCGCTGCAGTATGCGAAAGCTTTAGCGGCTGGTAACTGGGCAC
GCTTTCATCGATTGTGCATGAACTGGGATCTGGTTTTGAGAGAGGAGGAT
AGAACATTTCATGTGCTCGCTCGGTGTTTGATTTTCAAGCTTTTCCCCAT
CACGCGGCGACGGAGCATGGAGTTGTGGAGCAAAGTTATGTTTCAAAAAG
AGAAGATGTCAGTAGACGAAGTGCAGCGCCTTCTTTGCTTTGGAAATGCG
AAGCAAACTTTCGACTTCATGAGACTTTTCGGTTTGGAACTATCCTGTTA
CTGTACTTGTACTAGTAGTGATATGAAAGAGGGTGGTCGAAAGCAAAACG
CATGGGAGCGACCCGAGTCATCATCTACAGCAACAGTGACAGGTTGTAGC
CAAAAAAAGGGCATCAATTGTCATCTATACTACAAACCGCGAGATGCTCT
GCTTCATTCCCCATCGATTGCCCAAACTTATGAAGATCGTCAAAACATTC
AAGCGACGCTGTGTCCGAGACAAGACTCCTGGGTGCTTGACGCTGCCAAC
ATGGGGGAGGAAAATCTACGGGAAGGGAAGATAGCGACGGAAAAGCTCCA
AGAATTATGGAAAGGAATGAAAAAAAAGTAAATGGACGATGAAAA back to topCoding sequence (CDS) from alignment at CM002461.1:401265..403609- >rna3431 ID=rna3431|Name=rna3431|organism=Nannochloropsis gaditana|type=CDS|length=4392bp|location=Sequence derived from alignment at CM002461.1:401265..403609- (Nannochloropsis gaditana)
GCACATAAACATGGGCGAATGGCTGACTCTGAAAACGAAGTTGAACCTCA
TTTGGACGAGTTTCTCGCTTATTACACATTACTTCAACTGCACGATGTCC
TCTCGAGTGGGGAAAGACGGGAAGCTGGACCCTGTGACGGCGACGGGTGG
ACAAAGCTGTTTTTACATACCTATCGGGTCCTAGAGGAGACAGAGCTAAA
ATCTTGCGAAAATTCCAAGACGAAACTGCGAAGACGAGATTTTTCACTTC
CCAGAACGCAATGGGCGCTGCAGTATGCGAAAGCTTTAGCGGCTGGTAAC
TGGGCACGCTTTCATCGATTGTGCATGAACTGGGATCTGGTTTTGAGAGA
GGAGGATAGAACATTTCATGTGCTCGCTCGGTGTTTGATTTTCAAGCTTT
TCCCCATCACGCGGCGACGGAGCATGGAGTTGTGGAGCAAAGTTATGTTT
CAAAAAGAGAAGATGTCAGTAGACGAAGTGCAGCGCCTTCTTTGCTTTGG
AAATGCGAAGCAAACTTTCGACTTCATGAGACTTTTCGGTTTGGAACTAT
CCTGTTACTGTACTTGTACTAGTAGTGATATGAAAGAGGGTGGTCGAAAG
CAAAACGCATGGGAGCGACCCGAGTCATCATCTACAGCAACAGTGACAGG
TTGTAGCCAAAAAAAGGGCATCAATTGTCATCTATACTACAAACCGCGAG
ATGCTCTGCTTCATTCCCCATCGATTGCCCAAACTTATGAAGATCGTCAA
AACATTCAAGCGACGCTGTGTCCGAGACAAGACTCCTGGGTGCTTGACGC
TGCCAACATGGGGGAGGAAAATCTACGGGAAGGGAAGATAGCGACGGAAA
AGCTCCAAGAATTATGGAAAGGAATGAAAAAAAAGTAAACTGAATGCTGT
TAGATCTGGGCTTGCGACGCTGCTAGACTTTTTCCAAAATGTGCCACCAG
TCTTTGATGCGCACATGGGATGAGTGATCGGTTTATGGCTGTGCGAAAGG
ACATCATAGTGCAAGGCTTGGCGGGCTCCGGTGCACAGGCCATCTACAAA
CGCATCATTCGTTTCCACATTTTGTTCGACTACCTTTTGACAGAGCAGGC
ACATAAACATGGGCGAATGGCTGACTCTGAAAACGAAGTTGAACCTCATT
TGGACGAGTTTCTCGCTTATTACACATTACTTCAACTGCACGATGTCCTC
TCGAGTGGGGAAAGACGGGAAGCTGGACCCTGTGACGGCGACGGGTGGAC
AAAGCTGTTTTTACATACCTATCGGGTCCTAGAGGAGACAGAGCTAAAAT
CTTGCGAAAATTCCAAGACGAAACTGCGAAGACGAGATTTTTCACTTCCC
AGAACGCAATGGGCGCTGCAGTATGCGAAAGCTTTAGCGGCTGGTAACTG
GGCACGCTTTCATCGATTGTGCATGAACTGGGATCTGGTTTTGAGAGAGG
AGGATAGAACATTTCATGTGCTCGCTCGGTGTTTGATTTTCAAGCTTTTC
CCCATCACGCGGCGACGGAGCATGGAGTTGTGGAGCAAAGTTATGTTTCA
AAAAGAGAAGATGTCAGTAGACGAAGTGCAGCGCCTTCTTTGCTTTGGAA
ATGCGAAGCAAACTTTCGACTTCATGAGACTTTTCGGTTTGGAACTATCC
TGTTACTGTACTTGTACTAGTAGTGATATGAAAGAGGGTGGTCGAAAGCA
AAACGCATGGGAGCGACCCGAGTCATCATCTACAGCAACAGTGACAGGTT
GTAGCCAAAAAAAGGGCATCAATTGTCATCTATACTACAAACCGCGAGAT
GCTCTGCTTCATTCCCCATCGATTGCCCAAACTTATGAAGATCGTCAAAA
CATTCAAGCGACGCTGTGTCCGAGACAAGACTCCTGGGTGCTTGACGCTG
CCAACATGGGGGAGGAAAATCTACGGGAAGGGAAGATAGCGACGGAAAAG
CTCCAAGAATTATGGAAAGGAATGAAAAAAAAGTAAACTGAATGCTGTTA
GATCTGGGCTTGCGACGCTGCTAGACTTTTTCCAAAATGTGCCACCAGTC
TTTGATGCGCACATGGGATGAGTGATCGGTTTATGGCTGTGCGAAAGGAC
ATCATAGTGCAAGGCTTGGCGGGCTCCGGTGCACAGGCCATCTACAAACG
CATCATTCGTTTCCACATTTTGTTCGACTACCTTTTGACAGAGCAGGCAC
ATAAACATGGGCGAATGGCTGACTCTGAAAACGAAGTTGAACCTCATTTG
GACGAGTTTCTCGCTTATTACACATTACTTCAACTGCACGATGTCCTCTC
GAGTGGGGAAAGACGGGAAGCTGGACCCTGTGACGGCGACGGGTGGACAA
AGCTGTTTTTACATACCTATCGGGTCCTAGAGGAGACAGAGCTAAAATCT
TGCGAAAATTCCAAGACGAAACTGCGAAGACGAGATTTTTCACTTCCCAG
AACGCAATGGGCGCTGCAGTATGCGAAAGCTTTAGCGGCTGGTAACTGGG
CACGCTTTCATCGATTGTGCATGAACTGGGATCTGGTTTTGAGAGAGGAG
GATAGAACATTTCATGTGCTCGCTCGGTGTTTGATTTTCAAGCTTTTCCC
CATCACGCGGCGACGGAGCATGGAGTTGTGGAGCAAAGTTATGTTTCAAA
AAGAGAAGATGTCAGTAGACGAAGTGCAGCGCCTTCTTTGCTTTGGAAAT
GCGAAGCAAACTTTCGACTTCATGAGACTTTTCGGTTTGGAACTATCCTG
TTACTGTACTTGTACTAGTAGTGATATGAAAGAGGGTGGTCGAAAGCAAA
ACGCATGGGAGCGACCCGAGTCATCATCTACAGCAACAGTGACAGGTTGT
AGCCAAAAAAAGGGCATCAATTGTCATCTATACTACAAACCGCGAGATGC
TCTGCTTCATTCCCCATCGATTGCCCAAACTTATGAAGATCGTCAAAACA
TTCAAGCGACGCTGTGTCCGAGACAAGACTCCTGGGTGCTTGACGCTGCC
AACATGGGGGAGGAAAATCTACGGGAAGGGAAGATAGCGACGGAAAAGCT
CCAAGAATTATGGAAAGGAATGAAAAAAAAGTAAACTGAATGCTGTTAGA
TCTGGGCTTGCGACGCTGCTAGACTTTTTCCAAAATGTGCCACCAGTCTT
TGATGCGCACATGGGATGAGTGATCGGTTTATGGCTGTGCGAAAGGACAT
CATAGTGCAAGGCTTGGCGGGCTCCGGTGCACAGGCCATCTACAAACGCA
TCATTCGTTTCCACATTTTGTTCGACTACCTTTTGACAGAGCAGGCACAT
AAACATGGGCGAATGGCTGACTCTGAAAACGAAGTTGAACCTCATTTGGA
CGAGTTTCTCGCTTATTACACATTACTTCAACTGCACGATGTCCTCTCGA
GTGGGGAAAGACGGGAAGCTGGACCCTGTGACGGCGACGGGTGGACAAAG
CTGTTTTTACATACCTATCGGGTCCTAGAGGAGACAGAGCTAAAATCTTG
CGAAAATTCCAAGACGAAACTGCGAAGACGAGATTTTTCACTTCCCAGAA
CGCAATGGGCGCTGCAGTATGCGAAAGCTTTAGCGGCTGGTAACTGGGCA
CGCTTTCATCGATTGTGCATGAACTGGGATCTGGTTTTGAGAGAGGAGGA
TAGAACATTTCATGTGCTCGCTCGGTGTTTGATTTTCAAGCTTTTCCCCA
TCACGCGGCGACGGAGCATGGAGTTGTGGAGCAAAGTTATGTTTCAAAAA
GAGAAGATGTCAGTAGACGAAGTGCAGCGCCTTCTTTGCTTTGGAAATGC
GAAGCAAACTTTCGACTTCATGAGACTTTTCGGTTTGGAACTATCCTGTT
ACTGTACTTGTACTAGTAGTGATATGAAAGAGGGTGGTCGAAAGCAAAAC
GCATGGGAGCGACCCGAGTCATCATCTACAGCAACAGTGACAGGTTGTAG
CCAAAAAAAGGGCATCAATTGTCATCTATACTACAAACCGCGAGATGCTC
TGCTTCATTCCCCATCGATTGCCCAAACTTATGAAGATCGTCAAAACATT
CAAGCGACGCTGTGTCCGAGACAAGACTCCTGGGTGCTTGACGCTGCCAA
CATGGGGGAGGAAAATCTACGGGAAGGGAAGATAGCGACGGAAAAGCTCC
AAGAATTATGGAAAGGAATGAAAAAAAAGTAAACTGAATGCTGTTAGATC
TGGGCTTGCGACGCTGCTAGACTTTTTCCAAAATGTGCCACCAGTCTTTG
ATGCGCACATGGGATGAGTGATCGGTTTATGGCTGTGCGAAAGGACATCA
TAGTGCAAGGCTTGGCGGGCTCCGGTGCACAGGCCATCTACAAACGCATC
ATTCGTTTCCACATTTTGTTCGACTACCTTTTGACAGAGCAG back to top
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