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Properties
| Property Name | Value |
|---|
| Product | actin related protein |
| Orig transcript id | gnl|cribi|Naga_100080g24.2837.mrna |
| Orig protein id | gnl|cribi|Naga_100080g24.2837 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:332850..335150 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3405 ID=rna3405|Name=rna3405|organism=Nannochloropsis gaditana|type=mRNA|length=2233bp
TGTATTATGCCAAGGTTGCATGGTTAAAACATATCAATTGAGGTATTTCG
ATTATTTTTTCCCCTCCAATTGACAGAGCGGCTTCGCCAGATGGAAGAGA
AGTAAATCAAGTGTGCTCTGTGAAGATGGTCCCACAGGTTTCGTCCAGCT
TTCCCTCTTCGATTGATCCTAACGACCTTCAAGCATTCGCGTCCCCCCAC
TCCTCAACTCCTCTATCCGGCCACTCAATTTCCTCTCCTCCTTCAAATGA
ATGGTGGACATGGCCATGGTTCAACGCAAATTTAAATCTGTTTCTGACGT
TTTCGGAAAAGGCAATTATCCTCCTTCGTGAGGCTTTAAGTGCGTCGTGG
CTGGCTCTCCACGCCTGGTACCGTTTGGGTGTTCTACTGGGTCGTCCCGT
GTTGCGACTGCTCCTTCATCTTTGGAGATCTGCCCTCCCATACTTGCAAT
GGTTTGCCAAGGCTTTTATAAATCATTTGAAAGAGCAGGAACCAGAAGTC
TTGCTCGGATACGGATTATTCCTTGGCGCCGTGGTCGGCTTCTTCCTCTT
GCGCCGTTTGCTCCGTCGTCTTCGAGTATGGGACAGATGCCGAGCAACGA
TTGCCAGTAAAGTTGCATTGGTCGAATGTCGCTACCATCAGGCCCGAAAC
AAGCTCAACCAATATTCACGTCGGGCTGCCGAGGCCTTTCCGCACGTCCT
GTTCGTGGTTGCTTGTCTGGCCGTGCAGTGGCTGTTCCCCGCCGTGACCA
GCCTGCTGTCACAGAAGCTGGTCTTTAACGCCTTACTCCTGTACCTGCCG
GCGTTCGCCTCATTTCATGCCCTGGAGTCTTTTCCACCCAGGAAGGCGTC
CTTTCCTGGCTCCACGGGCACCAGGCACGCCAAGCCCGCCGACCTCCCCT
CCACGTCTCGCGCCTCCTCCACTGCCGCCCGCCTTGCTCCCACCGGTGCC
CCGTCCCATAGCCACGGGGACGACAAGCACGAAAAGCGCCTGAAGGAGTG
CTTGTCCTACTGGATCGTCGCGGCTTCGATTGTCGCGGCCGGGCAGGGAC
TCGACCAGCTCTGGCTTCGGTGGACGACCAAGTGGGTGCCCTGGGGCCAC
GAGTGCTTCCTCTATTTCCTGCTCTGGCTCCACCTCCCCCAAGGCGGTGG
CGCGCTGCTCAAGCACCATCTCCTTCCCTTCCTTCGCCGCCACCTGGGGG
GGATCCTCGCCCTTCAATCCAGGCGCGACGCGCTGGTCCGGCGCCTCCTG
AGTCTGGCTGTCTTCGCCCACCTCCTCAGTCACCCAACAGCCGACAATCT
TGCGCTGCACGTGGACGAATTCTTCCTGGTGCTCCCGGCCGCCGTCCTCA
CCTTCTCCCCCTTCGCAGGGTGGGGTCTCCTCTTCATCTCCTTGCTCTTC
CCTGTGCTGGCCTCCGCGCGCGCTTTGGGTGAAGAGGGTGGGAAGCGCCC
CGTGGGGTCGAAGGGCACCAAGAAGGAGACTGGAGGAAGGTCGCAGTCCC
CCCCCACGTATAGTCCTAGGCCTTGGCTCCAGTACTGGATCGTCTATGCG
CTCGGCCACGTGATCTTCCAAGTGCTCCCCATCTGGCCGCTCGTCCAGAT
GTGGGTATTCCTGTGGGTTCTCCTGCCCGACCTGGCTGGCATTCCTTTCC
TCCCTATTAAACTCGACGGGCGGCGACAGGTGTATGGGTTGTTGAGTCGG
CTGCACCGACTGGAGATGGCGGGCGCCGGGGGAAAGTTCCAGGGACAAGA
GCAGGCAAACCCTCCGGGTGCCGAAGACGGGGAGTAGCAGCAACACGGGC
AACGGGACAGAAAGAGCGCTGGGTACCCGATAAAGTCGGACGTATCCGGT
GCGTCCGAGGTCCTTTCAAGCTCACCAGCCCTGCTCGCTCAAGGAGTGAA
AGACGGAGGGGCGGGGGAGGAAGAAACGAGTGGAGACGGCAGGTTGGTAG
GGAAGACGAGAAAGGAGTAAGACTGAGGGGAAGAGAGGACAAACGTGTGT
TTGAAGACTGGAAGTAAGATTCGCAGGGTGAAAATTGTGCATATGTAAAG
GCGGTGGAGGGTCAGGGAAAGGGCAAAGGGAGCGAGGTGCTGATGGAGCT
TGAGCAATGCAATGGCTCTAGCAAGGTCCAAAGTACCTGATAAAAAGCAA
GAAAAAGCACGGAGAATCATCTTTGCAATCGATGAAAGGCGTGATCGATG
TAAGAGCCCCTCCTTCCCTTCCTCCACGAACCT back to topprotein sequence of rna3405 >rna3405-protein ID=rna3405-protein|Name=rna3405|organism=Nannochloropsis gaditana|type=polypeptide|length=445bp
MYQPQGGMEMNAVVAEIGGYAARLGFAGEDYPRSYFPSCAGFIPPDDSTT
RATNPSSSKQNNSKQIQRKEYKFDLGHNDSRMNVHTPLSGGLVEDWDMVE
QIWQHANKTALTVDLAQTPLLLIERAFNTSKLRQEYAELMFEKFQSPALF
LAKDSVLSCFACGKTSGLVVDIGAETTTVGPVQDGWLEAKGLMRSHLGGR
MVDRYLRAFLESDGVTIDPFLGQPPVAGTGEGMSASYRDFATLEVVRGLK
ESVCRMPEASVTPKDPKDSSVPKANYELPDGTVVSAGWERFQAADILMNP
EPAWELMPEGREEEDSMQVDGEEGGKEGEGGWSRESLPRMAATAVRRCEK
EQQSPLLSSVVLAGGGACLEGTMERLKVELENAMYGPGQAGSTRVKVLQA
GPQERKICAWLGGSIVGSLGTFHEMWVSKAEYGERGARVVDTKCP back to topmRNA from alignment at CM002461.1:332850..335150- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3405 ID=rna3405|Name=rna3405|organism=Nannochloropsis gaditana|type=mRNA|length=2301bp|location=Sequence derived from alignment at CM002461.1:332850..335150- (Nannochloropsis gaditana)
GTGAACATGGCCTTTCACGATTGAGCCTCATTGCCATCTTTTCATTCAAT
TCGTCGGTAGGGTCGTCGGGGAAGAAGACGTGGGCAAATGTATCAACCGC
AAGGTGAGGCAAACCCTGCTTTTCATAGATTGCACATGTTCCCTTCCCAA
TTGATCTTCTTCTGCATACTTCTCTCAATATCAGGTGGTATGGAGATGAA
TGCTGTGGTGGCAGAGATTGGCGGGTATGCAGCGAGGTTGGGGTTTGCGG
GCGAAGACTATCCGCGGTCGTATTTTCCATCCTGCGCCGGGTTTATCCCT
CCAGACGACTCTACGACACGTGCAACAAATCCCAGCAGCTCCAAACAAAA
CAACAGCAAACAAATACAGCGCAAAGAGTACAAATTTGACCTGGGTCACA
ATGACTCGCGCATGAATGTTCATACTCCCCTCTCTGGAGGGCTCGTGGAG
GACTGGGACATGGTGGAGCAAATATGGCAACACGCGAACAAGACTGCTCT
AACCGTTGATTTGGCACAAACACCACTTCTTCTCATCGAACGAGCCTTCA
ACACGTCGAAACTTCGGCAAGAATACGCGGAATTAATGTTCGAGAAATTT
CAGTCGCCTGCCCTCTTCCTTGCCAAGGACAGTGTATTAAGTTGCTTTGC
CTGCGGCAAAACTTCGGGCTTGGTAGTGGATATCGGTGCTGAGACGACAA
CTGTGGGTCCTGTCCAAGATGGTTGGCTGGAGGCGAAAGGTCTGATGCGC
TCCCATCTGGGCGGGAGGATGGTGGATCGGTACCTGCGGGCTTTCCTCGA
GAGTGATGGTGTCACCATAGACCCCTTCCTGGGACAGCCCCCAGTGGCAG
GAACGGGGGAGGGGATGAGCGCAAGTTACCGGGACTTTGCAACGTTGGAG
GTGGTCCGCGGGCTGAAGGAAAGCGTCTGCCGCATGCCCGAGGCCTCGGT
GACGCCAAAGGACCCCAAGGACTCGTCGGTCCCGAAAGCCAATTACGAGC
TGCCAGACGGGACGGTGGTGTCGGCGGGATGGGAGAGATTCCAAGCAGCA
GATATCTTGATGAACCCCGAGCCGGCTTGGGAGTTGATGCCGGAAGGGAG
GGAAGAGGAAGACAGCATGCAGGTGGACGGAGAAGAGGGCGGGAAGGAGG
GAGAGGGGGGCTGGAGCAGGGAGTCGTTGCCGCGCATGGCCGCAACGGCC
GTCCGGCGCTGTGAAAAGGAACAACAGTCCCCCTTGCTGAGCAGTGTGGT
CCTAGCCGGAGGTGGGGCGTGCCTGGAAGGGACCATGGAGAGGCTCAAAG
TGGAGCTGGAAAATGCGATGTACGGCCCCGGACAAGCGGGGTCCACGCGA
GTGAAGGTTTTGCAGGCAGGACCTCAGGAGAGAAAGATCTGCGCCTGGTT
GGGCGGGTCGATCGTGGGCTCTCTGGGGACATTTCATGAGATGTGGGTGA
GCAAGGCGGAGTACGGGGAGAGGGGTGCCCGGGTCGTGGACACTAAATGT
CCCTGAGTGAGACAGGAGGGAAGGTTCGTGGAGGAAGGGAAGGAGGGGCT
CTTACATCGATCACGCCTTTCATCGATTGCAAAGATGATTCTCCGTGCTT
TTTCTTGCTTTTTATCAGGTACTTTGGACCTTGCTAGAGCCATTGCATTG
CTCAAGCTCCATCAGCACCTCGCTCCCTTTGCCCTTTCCCTGACCCTCCA
CCGCCTTTACATATGCACAATTTTCACCCTGCGAATCTTACTTCCAGTCT
TCAAACACACGTTTGTCCTCTCTTCCCCTCAGTCTTACTCCTTTCTCGTC
TTCCCTACCAACCTGCCGTCTCCACTCGTTTCTTCCTCCCCCGCCCCTCC
GTCTTTCACTCCTTGAGCGAGCAGGGCTGGTGAGCTTGAAAGGACCTCGG
ACGCACCGGATACGTCCGACTTTATCGGGTACCCAGCGCTCTTTCTGTCC
CGTTGCCCGTGTTGCTGCTACTCCCCGTCTTCGGCACCCGGAGGGTTTGC
CTGCTCTTGTCCCTGGAACTTTCCCCCGGCGCCCGCCATCTCCAGTCGGT
GCAGCCGACTCAACAACCCATACACCTGTCGCCGCCCGTCGAGTTTAATA
GGGAGGAAAGGAATGCCAGCCAGGTCGGGCAGGAGAACCCACAGGAATAC
CCACATCTGGACGAGCGGCCAGATGGGGAGCACTTGGAAGATCACGTGGC
CGAGCGCATAGACGATCCAGTACTGGAGCCAAGGCCTAGGACTATACGTG
GGGGGGGACTGCGACCTTCCTCCAGTCTCCTTCTTGGTGCCCTTCGACCC
C back to topCoding sequence (CDS) from alignment at CM002461.1:332850..335150- >rna3405 ID=rna3405|Name=rna3405|organism=Nannochloropsis gaditana|type=CDS|length=2676bp|location=Sequence derived from alignment at CM002461.1:332850..335150- (Nannochloropsis gaditana)
GTGGTATGGAGATGAATGCTGTGGTGGCAGAGATTGGCGGGTATGCAGCG
AGGTTGGGGTTTGCGGGCGAAGACTATCCGCGGTCGTATTTTCCATCCTG
CGCCGGGTTTATCCCTCCAGACGACTCTACGACACGTGCAACAAATCCCA
GCAGCTCCAAACAAAACAACAGCAAACAAATACAGCGCAAAGAGTACAAA
TTTGACCTGGGTCACAATGACTCGCGCATGAATGTTCATACTCCCCTCTC
TGGAGGGCTCGTGGAGGACTGGGACATGGTGGAGCAAATATGGCAACACG
CGAACAAGACTGCTCTAACCGTTGATTTGGCACAAACACCACTTCTTCTC
ATCGAACGAGCCTTCAACACGTCGAAACTTCGGCAAGAATACGCGGAATT
AATGTTCGAGAAATTTCAGTCGCCTGCCCTCTTCCTTGCCAAGGACAGTG
TATTAAGTTGCTTTGCCTGCGGCAAAACTTCGGGCTTGGTAGTGGATATC
GGTGCTGAGACGACAACTGTGGGTCCTGTCCAAGATGGTTGGCTGGAGGC
GAAAGGTCTGATGCGCTCCCATCTGGGCGGGAGGATGGTGGATCGGTACC
TGCGGGCTTTCCTCGAGAGTGATGGTGTCACCATAGACCCCTTCCTGGGA
CAGCCCCCAGTGGCAGGAACGGGGGAGGGGATGAGCGCAAGTTACCGGGA
CTTTGCAACGTTGGAGGTGGTCCGCGGGCTGAAGGAAAGCGTCTGCCGCA
TGCCCGAGGCCTCGGTGACGCCAAAGGACCCCAAGGACTCGTCGGTCCCG
AAAGCCAATTACGAGCTGCCAGACGGGACGGTGGTGTCGGCGGGATGGGA
GAGATTCCAAGCAGCAGATATCTTGATGAACCCCGAGCCGGCTTGGGAGT
TGATGCCGGAAGGGAGGGAAGAGGAAGACAGCATGCAGGTGGACGGAGAA
GAGGGCGGGAAGGAGGGAGAGGGGGGCTGGAGCAGGGAGTCGTTGCCGCG
CATGGCCGCAACGGCCGTCCGGCGCTGTGAAAAGGAACAACAGTCCCCCT
TGCTGAGCAGTGTGGTCCTAGCCGGAGGTGGGGCGTGCCTGGAAGGGACC
ATGGAGAGGCTCAAAGTGGAGCTGGAAAATGCGATGTACGGCCCCGGACA
AGCGGGGTCCACGCGAGTGAAGGTTTTGCAGGCAGGACCTCAGGAGAGAA
AGATCTGCGCCTGGTTGGGCGGGTCGATCGTGGGCTCTCTGGGGACATTT
CATGAGATGTGGGTGAGCAAGGCGGAGTACGGGGAGAGGGGTGCCCGGGT
CGTGGACACTAAATGTCCCTGAATGTATCAACCGCAAGGTGGTATGGAGA
TGAATGCTGTGGTGGCAGAGATTGGCGGGTATGCAGCGAGGTTGGGGTTT
GCGGGCGAAGACTATCCGCGGTCGTATTTTCCATCCTGCGCCGGGTTTAT
CCCTCCAGACGACTCTACGACACGTGCAACAAATCCCAGCAGCTCCAAAC
AAAACAACAGCAAACAAATACAGCGCAAAGAGTACAAATTTGACCTGGGT
CACAATGACTCGCGCATGAATGTTCATACTCCCCTCTCTGGAGGGCTCGT
GGAGGACTGGGACATGGTGGAGCAAATATGGCAACACGCGAACAAGACTG
CTCTAACCGTTGATTTGGCACAAACACCACTTCTTCTCATCGAACGAGCC
TTCAACACGTCGAAACTTCGGCAAGAATACGCGGAATTAATGTTCGAGAA
ATTTCAGTCGCCTGCCCTCTTCCTTGCCAAGGACAGTGTATTAAGTTGCT
TTGCCTGCGGCAAAACTTCGGGCTTGGTAGTGGATATCGGTGCTGAGACG
ACAACTGTGGGTCCTGTCCAAGATGGTTGGCTGGAGGCGAAAGGTCTGAT
GCGCTCCCATCTGGGCGGGAGGATGGTGGATCGGTACCTGCGGGCTTTCC
TCGAGAGTGATGGTGTCACCATAGACCCCTTCCTGGGACAGCCCCCAGTG
GCAGGAACGGGGGAGGGGATGAGCGCAAGTTACCGGGACTTTGCAACGTT
GGAGGTGGTCCGCGGGCTGAAGGAAAGCGTCTGCCGCATGCCCGAGGCCT
CGGTGACGCCAAAGGACCCCAAGGACTCGTCGGTCCCGAAAGCCAATTAC
GAGCTGCCAGACGGGACGGTGGTGTCGGCGGGATGGGAGAGATTCCAAGC
AGCAGATATCTTGATGAACCCCGAGCCGGCTTGGGAGTTGATGCCGGAAG
GGAGGGAAGAGGAAGACAGCATGCAGGTGGACGGAGAAGAGGGCGGGAAG
GAGGGAGAGGGGGGCTGGAGCAGGGAGTCGTTGCCGCGCATGGCCGCAAC
GGCCGTCCGGCGCTGTGAAAAGGAACAACAGTCCCCCTTGCTGAGCAGTG
TGGTCCTAGCCGGAGGTGGGGCGTGCCTGGAAGGGACCATGGAGAGGCTC
AAAGTGGAGCTGGAAAATGCGATGTACGGCCCCGGACAAGCGGGGTCCAC
GCGAGTGAAGGTTTTGCAGGCAGGACCTCAGGAGAGAAAGATCTGCGCCT
GGTTGGGCGGGTCGATCGTGGGCTCTCTGGGGACATTTCATGAGATGTGG
GTGAGCAAGGCGGAGTACGGGGAGAGGGGTGCCCGGGTCGTGGACACTAA
ATGTCCCTGAATGTATCAACCGCAAG back to top
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