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Properties
| Property Name | Value |
|---|
| Product | ATPase, F0 complex, subunit D, mitochondrial |
| Orig transcript id | gnl|cribi|Naga_100824g2.7362.mrna |
| Orig protein id | gnl|cribi|Naga_100824g2.7362 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:269218..271095 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3382 ID=rna3382|Name=rna3382|organism=Nannochloropsis gaditana|type=mRNA|length=821bp
TCCCTCTTCTCTGGACCCTCCCCTTCCCCTCTCTTCACCCTCCTCCCTCC
CCCTCCCCGCCAGTCACGGCATCGAGCACCTCCACCTCCCCACCGTGGAT
CATTTCGAACCCACACCGGAGGCTGTGGCCGCTGCCGTCGACTTCATCGC
GGAGCGCCACCGGCGGAAAGAGAAATGCTTCGTGCATTGCAAGGCGGGAC
ATGGCCGGTCCGCAGCGGTCGCGCTCTGTTGGCTAGCCACACAGCATCGG
GGTAGGCATTAGCGGGAGCAGGGGGGGAAAGGACGGTTGGTCCTCGGAAG
TTCTTGGGGGGGGCTTTTCTTAATTTTTGGGTTTTTTGGAAGACACCTCA
ATTACGTTTGAATGGAGCCGATGTCCTCCCAGGGAGAAGTGTGTGTGATG
GGGAACGACTGGGTGTGTGGAAAGGCTTTACGAGGTTTAATCTTCCTCCC
TTGCTTCCTCCCTCCTTCCCGTCTTCCTGTCCCACCTTCCTCATGCTCAA
GGTGTGAGCACACAGCTTTTAAACCAACGGCTGAGCGAAAGGAGGAAGGT
GCGAAAAACTTTGTACAGGCAGAATTGTGTGAAAGGATTCCTAAAAATGC
ACGGGCTGAAGGTCGGAGGGGGAAAGGGGGGGAGCATGGAGATGGTGGAA
GTAGGGGGGGAGGAGGAGGAGGGTGACAGCGAGGTCGGGGGAGGAAGGGA
AAGAGTTGCGATGACGGCAAGGAAGAAACAGCAGATGGGAACCAACGGTT
ATGCTCAAGGGCGTCGAAGATGATGGTCGATGTGGAAGGGAAAAAAAGAA
AAGAGTAACTTGTGTCTTCCC back to topprotein sequence of rna3382 >rna3382-protein ID=rna3382-protein|Name=rna3382|organism=Nannochloropsis gaditana|type=polypeptide|length=188bp
MASTVRGIVSRQQALWMRTAAAPVSVTRRALSNWDALGRKVEADVEAKAD
FNALKNQWDGIEKDFNTWSKEVAPIDWAKYKNNIEAPGFVDFLKERYEGI
DWSQLNTKLSEEEIAADAAGKAALLEEGKALVAAAEKLIEETQAKMHLAA
TKRTNKDSLVQDVWEKNPAIKQEVLDEIENHQWFKDVK back to topmRNA from alignment at CM002461.1:269218..271095+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3382 ID=rna3382|Name=rna3382|organism=Nannochloropsis gaditana|type=mRNA|length=1878bp|location=Sequence derived from alignment at CM002461.1:269218..271095+ (Nannochloropsis gaditana)
ctccctccctccctcaccttgTCCCTCTACATCTGTTTGCACCCTCCCAC
GTACGCCTCGTTCATTTCGGTGCCAACATGGTCTGGCCGTATGTTCTTCA
TGGGTGTTTTCCTTGGCTTGTGACGAAAATGGCGGTTATCAAGCCACCAG
TGTCCATGCCGGTTGCTCAGCACCAATCTACCCTGTCGAATCATCAGCTC
ACAACATAATTGCACCCACTTCACTTCTCCCGCGTTTGGTCTCTAAGGTA
TTGAAGGATGGCCAGCACTGTTCGTGGAATTGTGAGCCGCCAGCAGGCTC
TATGGATGAGGACTGCGGCGGCCCCAGTCTCGGTGACCCGTCGCGCCCTG
AGCAACTGGTACGATGCcggagggggtagggggggagaggatttGAAGGG
GACTGAGTGTTTGCCGAGTCGGGAAGAATCGCTGCGCGCTTTCTGTACGA
ACGATTGAAGAGCTAAGGAGGTAGATTATGTGGGGAGAAGAGGTAAACAT
ATGGTGAAGCGTGAATTTGAGGGGGCTCCTCTTGCGTGAGAAGGAGACGA
CTTCCTGTTGGTCGAGGCGGCCGATCTTCTCTCTCATCCTAAAAAAAACT
TCTGCACATATGCACATGGTCTGAACCATTTTGTCCACAGGGATGCTCTG
GGtcggaaggtggaggcggacgtggaggcgaaAGCGGATTTCAACGCTCT
GAAAAATCAGTGGGATGGGATTGAGAAAGACTTCAATACGTGGTCCAAGG
AGGTGAGCGAGGGATGGCAAGGATGAGATGGATGGAAAGGACGGTGGgca
ccgggaggagggatgttCAGAGGCTGCGCTGGGTCAGGACGGCACAGGAT
TGTGGAAGATATATCGCGTCCTGTTCCATAATTGCTGTTGGATCAAGAAG
GAATAGAATGGTGGAAGATGCACCTCTTCCTGTCCGTCCCTTCATGGCTC
TTGTCTCCTCCCATACCCCTCGAGGTTGTCCGCGGACAGGGAACTGCGCC
AGTCACATTAGTCACATTCAcaatttctctttcccttcttccctccttcc
ctccctcgcacccatcctcccccaggTCGCCCCCATTGACTGGGCCAAGT
ATAAGAATAATATCGAAGCCCCTGGTTTCGTGGATTTCTTGAAGGAGCGC
TACGAGGGCATCGATTGGTCGCAATTAAACACGAAactgagcgaggagga
aatcgcCGCGGACGCGGCGGGCAAGGCGGCTTTGGTGCGTTACCgtgcct
ttcctgcctttgctCTGCGTGTGTGTGTTCCTTTTCTtgtggggcggggg
gcatgttgagggaaagaaggacgtTCTGGAATGGGGGGGTGTCGTGTGGC
TTGTTCTCATTCAGCTTTGTCCTTGTTCGTACTGCTCTTCGATGTCGTGG
TCATGTTTGGGTTTCTGacactttctttccccccgcactccctccctcac
tctctccctccctccctcagctcgAAGAGGGCAAGGCCTTGGTGGCAGCA
GCGGAGAAACTGATCGAAGAGACGCAGGCCAAGATGCACCTGGCGGCGAC
GAAGAGAACGAATAAAGACTCCTTGGTGCAAGACGTGTGGGAGAAGAACC
CCGCGATCAAGCAGGaggtgagggcgggagggagggtgggagggagggcg
aggcttgGGCTTGCGACTGGGAAACTGGAGGAGAAAATCTTTCAGAGAGG
GGCTTGTTGTCGTGTCCAttgtccttcctttttttcatgctctcatcccc
tctttccctccctccctccctccccctctctctccctctctcccccccca
ccttccttccttcctccctctttgccccaGGTCTTGGACGAGATCGAGAA
CCACCAGTGGTTCAAGGACGTCAAGTAA back to topCoding sequence (CDS) from alignment at CM002461.1:269218..271095+ >rna3382 ID=rna3382|Name=rna3382|organism=Nannochloropsis gaditana|type=CDS|length=2835bp|location=Sequence derived from alignment at CM002461.1:269218..271095+ (Nannochloropsis gaditana)
ATGGCCAGCACTGTTCGTGGAATTGTGAGCCGCCAGCAGGCTCTATGGAT
GAGGACTGCGGCGGCCCCAGTCTCGGTGACCCGTCGCGCCCTGAGCAACT
GGGATGCTCTGGGtcggaaggtggaggcggacgtggaggcgaaAGCGGAT
TTCAACGCTCTGAAAAATCAGTGGGATGGGATTGAGAAAGACTTCAATAC
GTGGTCCAAGGAGgTCGCCCCCATTGACTGGGCCAAGTATAAGAATAATA
TCGAAGCCCCTGGTTTCGTGGATTTCTTGAAGGAGCGCTACGAGGGCATC
GATTGGTCGCAATTAAACACGAAactgagcgaggaggaaatcgcCGCGGA
CGCGGCGGGCAAGGCGGCTTTGctcgAAGAGGGCAAGGCCTTGGTGGCAG
CAGCGGAGAAACTGATCGAAGAGACGCAGGCCAAGATGCACCTGGCGGCG
ACGAAGAGAACGAATAAAGACTCCTTGGTGCAAGACGTGTGGGAGAAGAA
CCCCGCGATCAAGCAGGagGTCTTGGACGAGATCGAGAACCACCAGTGGT
TCAAGGACGTCAAGTAAATGGCCAGCACTGTTCGTGGAATTGTGAGCCGC
CAGCAGGCTCTATGGATGAGGACTGCGGCGGCCCCAGTCTCGGTGACCCG
TCGCGCCCTGAGCAACTGGGATGCTCTGGGtcggaaggtggaggcggacg
tggaggcgaaAGCGGATTTCAACGCTCTGAAAAATCAGTGGGATGGGATT
GAGAAAGACTTCAATACGTGGTCCAAGGAGgTCGCCCCCATTGACTGGGC
CAAGTATAAGAATAATATCGAAGCCCCTGGTTTCGTGGATTTCTTGAAGG
AGCGCTACGAGGGCATCGATTGGTCGCAATTAAACACGAAactgagcgag
gaggaaatcgcCGCGGACGCGGCGGGCAAGGCGGCTTTGctcgAAGAGGG
CAAGGCCTTGGTGGCAGCAGCGGAGAAACTGATCGAAGAGACGCAGGCCA
AGATGCACCTGGCGGCGACGAAGAGAACGAATAAAGACTCCTTGGTGCAA
GACGTGTGGGAGAAGAACCCCGCGATCAAGCAGGagGTCTTGGACGAGAT
CGAGAACCACCAGTGGTTCAAGGACGTCAAGTAAATGGCCAGCACTGTTC
GTGGAATTGTGAGCCGCCAGCAGGCTCTATGGATGAGGACTGCGGCGGCC
CCAGTCTCGGTGACCCGTCGCGCCCTGAGCAACTGGGATGCTCTGGGtcg
gaaggtggaggcggacgtggaggcgaaAGCGGATTTCAACGCTCTGAAAA
ATCAGTGGGATGGGATTGAGAAAGACTTCAATACGTGGTCCAAGGAGgTC
GCCCCCATTGACTGGGCCAAGTATAAGAATAATATCGAAGCCCCTGGTTT
CGTGGATTTCTTGAAGGAGCGCTACGAGGGCATCGATTGGTCGCAATTAA
ACACGAAactgagcgaggaggaaatcgcCGCGGACGCGGCGGGCAAGGCG
GCTTTGctcgAAGAGGGCAAGGCCTTGGTGGCAGCAGCGGAGAAACTGAT
CGAAGAGACGCAGGCCAAGATGCACCTGGCGGCGACGAAGAGAACGAATA
AAGACTCCTTGGTGCAAGACGTGTGGGAGAAGAACCCCGCGATCAAGCAG
GagGTCTTGGACGAGATCGAGAACCACCAGTGGTTCAAGGACGTCAAGTA
AATGGCCAGCACTGTTCGTGGAATTGTGAGCCGCCAGCAGGCTCTATGGA
TGAGGACTGCGGCGGCCCCAGTCTCGGTGACCCGTCGCGCCCTGAGCAAC
TGGGATGCTCTGGGtcggaaggtggaggcggacgtggaggcgaaAGCGGA
TTTCAACGCTCTGAAAAATCAGTGGGATGGGATTGAGAAAGACTTCAATA
CGTGGTCCAAGGAGgTCGCCCCCATTGACTGGGCCAAGTATAAGAATAAT
ATCGAAGCCCCTGGTTTCGTGGATTTCTTGAAGGAGCGCTACGAGGGCAT
CGATTGGTCGCAATTAAACACGAAactgagcgaggaggaaatcgcCGCGG
ACGCGGCGGGCAAGGCGGCTTTGctcgAAGAGGGCAAGGCCTTGGTGGCA
GCAGCGGAGAAACTGATCGAAGAGACGCAGGCCAAGATGCACCTGGCGGC
GACGAAGAGAACGAATAAAGACTCCTTGGTGCAAGACGTGTGGGAGAAGA
ACCCCGCGATCAAGCAGGagGTCTTGGACGAGATCGAGAACCACCAGTGG
TTCAAGGACGTCAAGTAAATGGCCAGCACTGTTCGTGGAATTGTGAGCCG
CCAGCAGGCTCTATGGATGAGGACTGCGGCGGCCCCAGTCTCGGTGACCC
GTCGCGCCCTGAGCAACTGGGATGCTCTGGGtcggaaggtggaggcggac
gtggaggcgaaAGCGGATTTCAACGCTCTGAAAAATCAGTGGGATGGGAT
TGAGAAAGACTTCAATACGTGGTCCAAGGAGgTCGCCCCCATTGACTGGG
CCAAGTATAAGAATAATATCGAAGCCCCTGGTTTCGTGGATTTCTTGAAG
GAGCGCTACGAGGGCATCGATTGGTCGCAATTAAACACGAAactgagcga
ggaggaaatcgcCGCGGACGCGGCGGGCAAGGCGGCTTTGctcgAAGAGG
GCAAGGCCTTGGTGGCAGCAGCGGAGAAACTGATCGAAGAGACGCAGGCC
AAGATGCACCTGGCGGCGACGAAGAGAACGAATAAAGACTCCTTGGTGCA
AGACGTGTGGGAGAAGAACCCCGCGATCAAGCAGGagGTCTTGGACGAGA
TCGAGAACCACCAGTGGTTCAAGGACGTCAAGTAA back to top
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