rna3375, rna3375 (mRNA) Nannochloropsis gaditana

Overview
Namerna3375
Unique Namerna3375
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length767
Alignment locationCM002461.1:254921..256024 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102134g1.5285.mrna
Orig protein idgnl|cribi|Naga_102134g1.5285
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:254921..256024 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102134g1gene3250Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3375rna3375-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27307.1cds3366Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3375 ID=rna3375|Name=rna3375|organism=Nannochloropsis gaditana|type=mRNA|length=767bp
CTCTCCTCCGCTTCCTCCTCCCTTCCACCCCAATACCCTCCCTCCCTCCC
TCCCTCCCGCCCCGACTACCGCCTCAACTTTGCTCTGCACTGCGGCTCGG
TCAGCGGGCCCGTCCCCGCCGTTCCGATCTTCTCCCGCGACGCCCTCGAG
GAGCAGTTGGAGATGATGATGCGATGGGCCCTGGCAAGAAGCTGCCGGTT
GGAGGGAGGAGGGGGAGGGGGAGGGAGGAAGGGAGGGAGGGAGGGTCGGT
ACATGAGCTTACCGAGGATGTGTTGGTGGTATCACAAAGATTTCGCGCCA
GATTTGATGGCCGCAATCGTCCCCCCGGCTGTCGGTGGAGAAGCAGCGGG
TGGTGAGGCGGTGGATGGAGGGAGGGGGGAGGGAGAGAGGGAAGGAGGGA
GGGAGGGGGCTGAGCATGAGTTTGAGTGGGGGGAGGGCGGGAGGGAGGGA
GGGGTGGGCGGTTCGATACTTGCCCTTCTCCTTTGAGACGCGTGCGCTGC
GACGTTTGGATGAAGAGGAAGAGATGAGGATGCGCGCACCGTAGAGCGAG
GAGGACGGCAAGAGGGAGGGGGAAGGGAGGGGGACGGGGAGAAGAGGGCT
GGGTAAATGTATCGTGAGAAGGAAGATACGCGAGCAGAAAATTTGCTTTG
GGAAGCAAGAGGGAGGTCTCTTGCTAACAAGGTAGGGGGGAAATCCCCCC
CGATTCAAAATTTAGAAAATCCGTTGACCTACCGGAAGGTTCTGACACTA
TTCGAGATAATCCTAAC
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protein sequence of rna3375

>rna3375-protein ID=rna3375-protein|Name=rna3375|organism=Nannochloropsis gaditana|type=polypeptide|length=129bp
MELGLLAKGFAQTILAFVRAINPDMKHSFGDDNNTTLPHITVPLFHAAES
FIITPAGAAPPPLGINFVTSETDKARRAGKIPLPRFDTTSTISFSFHSMF
LDFQTWRLVSFPFIRSLDLHLMWARSAVR
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mRNA from alignment at CM002461.1:254921..256024-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3375 ID=rna3375|Name=rna3375|organism=Nannochloropsis gaditana|type=mRNA|length=1104bp|location=Sequence derived from alignment at CM002461.1:254921..256024- (Nannochloropsis gaditana)
ACACCCGTCCTCAACCCCTACTTCGGCGGGGAAGTGACGGAGAAGATGGA
GCTGGGCCTTCTGGCCAAGGGATTCGCCCAGACGATCCTCGCCTTCGTTC
GCGCCATAAATCCCGACATGAAGCACAGGTGTCTCCCTCCCCCCCTCCCT
CCCTCGGGCCGACGCTCTTCGCTCTTTCTCCTTGTGCACATGCCACCGCC
CCCTCCGTCGATTCATCCCCTCCTTCCCCTCTCTCCCTCCTTTCCTCCCT
CCCTCCCTCCCTCCCTAGCTTCGGTGACGACAACAACACCACCCTTCCTC
ACATAACAGTACCCCTCTTTCACGCGGCGGAGAGCTTCATCATCACCCCT
GCCGGCGCAGGTACCCCTCCCTCGCTCCCTCCCGCCTTCCCTCCCTCCCT
TACCCCACTTTTTCTTCCATCATTTGCTTGTCAATGATTCCCGGGACAGG
AGCCTCCCTTCCCCTCCCTCCCTCTCTCCCTCCCTCTTCCCTCCCTCCCT
CCCTACCCTCCTACCTTCTCCCCTCTTTCCGACGTTCACTCGCTTCCCCG
TCCGCTTTCGTGTCGCCAATTTTTTCCCAGCCCCGCCTCCTCTCGGGATT
AATTTTGTCACCTCCGAGACCGATAAAGCCCGACGGGCGGGGAAAATCCC
CCTCCCTCGCTTCGACACCACCTCCACCATCTCCTTCAGGTCGGGAGGAA
GGGAGGAAGGGGAAGAAGGAGTGAGGGAGGGAAAGAAGGAGGGAGGAAGA
GAGGGAAGAAAGGAGGGAGGGAGGGAGGAAGCAGTAGGAGTAGGGATGAA
CAAAGGAGAAAGGGACCGACGAGAGAATAGGTGAGGGTTCAAGAGGGACG
CCGTCTCAACTCAGGGCTTCCTCCCTCCCTCCTTCCCTCCCTCCCTCAGC
TTCCACTCCATGTTCCTAGACTTTCAGACCTGGCGCTTGGTCTCCTTCCC
CTTCATCCGCTCTCTGGATCTGCACCTGATGTGGGCGAGGAGCGCCGTCC
GGTGAGGGAGGGAGGGAGGGAGGGAGGGGAGGGAGAGGAAGGAGCAACTA
GTAGTGGTCGGTGTGTAAAAGGGCCGTTCTCGCCTACAATGGAAGCTCCT
CTCC
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Coding sequence (CDS) from alignment at CM002461.1:254921..256024-

>rna3375 ID=rna3375|Name=rna3375|organism=Nannochloropsis gaditana|type=CDS|length=1560bp|location=Sequence derived from alignment at CM002461.1:254921..256024- (Nannochloropsis gaditana)
CTTCCACTCCATGTTCCTAGACTTTCAGACCTGGCGCTTGGTCTCCTTCC
CCTTCATCCGCTCTCTGGATCTGCACCTGATGTGGGCGAGGAGCGCCGTC
CGGTGACCCCGCCTCCTCTCGGGATTAATTTTGTCACCTCCGAGACCGAT
AAAGCCCGACGGGCGGGGAAAATCCCCCTCCCTCGCTTCGACACCACCTC
CACCATCTCCTTCAGCTTCGGTGACGACAACAACACCACCCTTCCTCACA
TAACAGTACCCCTCTTTCACGCGGCGGAGAGCTTCATCATCACCCCTGCC
GGCGCAGATGGAGCTGGGCCTTCTGGCCAAGGGATTCGCCCAGACGATCC
TCGCCTTCGTTCGCGCCATAAATCCCGACATGAAGCACAGCTTCCACTCC
ATGTTCCTAGACTTTCAGACCTGGCGCTTGGTCTCCTTCCCCTTCATCCG
CTCTCTGGATCTGCACCTGATGTGGGCGAGGAGCGCCGTCCGGTGACCCC
GCCTCCTCTCGGGATTAATTTTGTCACCTCCGAGACCGATAAAGCCCGAC
GGGCGGGGAAAATCCCCCTCCCTCGCTTCGACACCACCTCCACCATCTCC
TTCAGCTTCGGTGACGACAACAACACCACCCTTCCTCACATAACAGTACC
CCTCTTTCACGCGGCGGAGAGCTTCATCATCACCCCTGCCGGCGCAGATG
GAGCTGGGCCTTCTGGCCAAGGGATTCGCCCAGACGATCCTCGCCTTCGT
TCGCGCCATAAATCCCGACATGAAGCACAGCTTCCACTCCATGTTCCTAG
ACTTTCAGACCTGGCGCTTGGTCTCCTTCCCCTTCATCCGCTCTCTGGAT
CTGCACCTGATGTGGGCGAGGAGCGCCGTCCGGTGACCCCGCCTCCTCTC
GGGATTAATTTTGTCACCTCCGAGACCGATAAAGCCCGACGGGCGGGGAA
AATCCCCCTCCCTCGCTTCGACACCACCTCCACCATCTCCTTCAGCTTCG
GTGACGACAACAACACCACCCTTCCTCACATAACAGTACCCCTCTTTCAC
GCGGCGGAGAGCTTCATCATCACCCCTGCCGGCGCAGATGGAGCTGGGCC
TTCTGGCCAAGGGATTCGCCCAGACGATCCTCGCCTTCGTTCGCGCCATA
AATCCCGACATGAAGCACAGCTTCCACTCCATGTTCCTAGACTTTCAGAC
CTGGCGCTTGGTCTCCTTCCCCTTCATCCGCTCTCTGGATCTGCACCTGA
TGTGGGCGAGGAGCGCCGTCCGGTGACCCCGCCTCCTCTCGGGATTAATT
TTGTCACCTCCGAGACCGATAAAGCCCGACGGGCGGGGAAAATCCCCCTC
CCTCGCTTCGACACCACCTCCACCATCTCCTTCAGCTTCGGTGACGACAA
CAACACCACCCTTCCTCACATAACAGTACCCCTCTTTCACGCGGCGGAGA
GCTTCATCATCACCCCTGCCGGCGCAGATGGAGCTGGGCCTTCTGGCCAA
GGGATTCGCCCAGACGATCCTCGCCTTCGTTCGCGCCATAAATCCCGACA
TGAAGCACAG
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Synonyms
Publications