EWM27307.1, cds3366 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27307.1 vs. NCBI_GenBank
Match: gi|585109500|gb|EWM27307.1| (hypothetical protein Naga_102134g1 [Nannochloropsis gaditana]) HSP 1 Score: 261.151 bits (666), Expect = 2.438e-88 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
Query: 1 MELGLLAKGFAQTILAFVRAINPDMKHSFGDDNNTTLPHITVPLFHAAESFIITPAGAAPPPLGINFVTSETDKARRAGKIPLPRFDTTSTISFSFHSMFLDFQTWRLVSFPFIRSLDLHLMWARSAVR 129
MELGLLAKGFAQTILAFVRAINPDMKHSFGDDNNTTLPHITVPLFHAAESFIITPAGAAPPPLGINFVTSETDKARRAGKIPLPRFDTTSTISFSFHSMFLDFQTWRLVSFPFIRSLDLHLMWARSAVR
Sbjct: 1 MELGLLAKGFAQTILAFVRAINPDMKHSFGDDNNTTLPHITVPLFHAAESFIITPAGAAPPPLGINFVTSETDKARRAGKIPLPRFDTTSTISFSFHSMFLDFQTWRLVSFPFIRSLDLHLMWARSAVR 129
BLAST of EWM27307.1 vs. NCBI_GenBank
Match: gi|299472422|emb|CBN77610.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 108.997 bits (271), Expect = 4.296e-25 Identity = 53/137 (38.69%), Postives = 79/137 (57.66%), Query Frame = 0
Query: 1 MELGLLAKGFAQTILAFVRAINPDMKHSFGDDNNTTLPHITVPLFHAAESFIITPAGAAPPPLGINFVTSETDKARRAGK--------IPLPRFDTTSTISFSFHSMFLDFQTWRLVSFPFIRSLDLHLMWARSAVR 129
M+LGLL +G + +L+F + +N + +SFGD++N LPHI+ PL + +S + TP G P LG +F E DK R+A + + + F T T SFSFHSM++D W P +R +DLH W +A+R
Sbjct: 586 MKLGLLTRGLCKLLLSFGQKLNRRLHYSFGDNDNAELPHISFPLLTSVDSLVCTPEGQEVPALGKSF---EEDKDRKASRRRGEEDKALGIGDFQTGCTYSFSFHSMYIDMAQWSTCKIPVMRDIDLHTFWGNAALR 719
BLAST of EWM27307.1 vs. NCBI_GenBank
Match: gi|585113187|gb|EWM30523.1| (protein of unknown function DUF547 [Nannochloropsis gaditana]) HSP 1 Score: 96.6709 bits (239), Expect = 1.051e-20 Identity = 53/127 (41.73%), Postives = 68/127 (53.54%), Query Frame = 0
Query: 1 MELGLLAKGFAQTILAFVRAINPDMKHSFGDD-------NNTTLPHITVPLFHAAESFIITPAGAAPPPLGINFVT-SETDKARRAGKIPLPRFDTTSTISFSFHSMFLDFQTWRLVSFPFIRSLDL 119
M LGL+ K A +LAF R + ++ +SFGD LPH+T PL + ++TPAG PPPLG F ET RR GK P F S SFHSM+LDF W+LV+ +S+DL
Sbjct: 265 MHLGLVTKTVAGMVLAFARRVLKNLHYSFGDKGGEAVEAEQVELPHLTFPLSRGMDRLVVTPAGQEPPPLGKEFYEPDETRVPRRGGKGKEPEFVLGPIYSMSFHSMYLDFSQWQLVNIAGQKSIDL 391
BLAST of EWM27307.1 vs. NCBI_GenBank
Match: gi|922864432|gb|KOO31692.1| (hypothetical protein Ctob_006924 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 93.2041 bits (230), Expect = 1.672e-19 Identity = 55/140 (39.29%), Postives = 77/140 (55.00%), Query Frame = 0
Query: 1 MELGLLAKGFAQTILAFVRAINPDMKHSFGD---DNNTTLPHITVPLFHAAESFIITPAGAAPPPLGINFVTSETD--------KARRAGKIPLPRFDTTSTISFSFHSMFLDFQTWRLVSFPFIRSLDLHLMWARSAVR 129
M+LGLL KG A+ +L+ + A+ P + SFG+ N PHI L AA+ I+TPAG APPPLG + D + R+ G IP F+ T +FSF++ LD TW++V PF ++DLH W A+R
Sbjct: 39 MQLGLLTKGVARGVLSLISAVLP-IHFSFGNPSLSQNAERPHIVSNLMIAADRMIVTPAGEAPPPLGTDATFDLEDLEDNAARKRRRQLGAIP---FEVGPTYTFSFNTSNLDLPTWKMVGVPFSGTVDLHNFWQDGALR 174
BLAST of EWM27307.1 vs. NCBI_GenBank
Match: gi|551605548|ref|XP_005784166.1| (hypothetical protein EMIHUDRAFT_442069 [Emiliania huxleyi CCMP1516] >gi|485637230|gb|EOD31737.1| hypothetical protein EMIHUDRAFT_442069 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 92.8189 bits (229), Expect = 2.158e-19 Identity = 48/130 (36.92%), Postives = 74/130 (56.92%), Query Frame = 0
Query: 1 MELGLLAKGFAQTILAFVRAINP-DMKHSFGDDNNTTLPHITVPLFHAAESFIITPAGAAPPPLGINFVTSETDKARRAGKIPLPRFDTTSTISFSFHSMFLDFQTWRLVSFPFIRSLDLHLMWARSAVR 129
M+LGL+ +G ++ IL + NP M +SFGD LPHI +PL+ A + + +P G APP LG+ SE ++ R G L +D + T SFSF++ ++D W+L P +R + L W+ S +R
Sbjct: 195 MQLGLVTRGLSKLILQLLVKFNPPGMHYSFGDREGRMLPHIVLPLWRAVDRLVASPPGTAPPELGVPLDESEAARSARKGGASLGEWDPSFTYSFSFNTGYIDLPHWKLHRLP-MRDVYLSSFWSDSDLR 323
BLAST of EWM27307.1 vs. NCBI_GenBank
Match: gi|673016644|ref|XP_008862283.1| (hypothetical protein H310_01051 [Aphanomyces invadans] >gi|574481486|gb|ETW08478.1| hypothetical protein H310_01051 [Aphanomyces invadans]) HSP 1 Score: 89.3521 bits (220), Expect = 3.274e-18 Identity = 47/139 (33.81%), Postives = 73/139 (52.52%), Query Frame = 0
Query: 1 MELGLLAKGFAQTILAFVRAINPDMKHSFGD--------DNNTTLPHITVPLFHAAESFIITPAGAAPPPLGIN--FVTSETDKARRAGKIPLPRFDTTSTISFSFHSMFLDFQTWRLVSFPFIRSLDLHLMWARSAVR 129
M+LG KG + +L+ + + + +SFG ++ LPH+ PL + + FI TPAG PP LG + T E RR+GK P F+T T SFSF + +LDF+ W++V+ P + ++L W +R
Sbjct: 186 MKLGFFTKGLCRVLLSVINCLVVGLHNSFGRLYPGDVALQDDEELPHLAFPLHSSVDEFICTPAGEEPPALGSDGFLETREERAKRRSGKYPY-EFNTADTYSFSFFNFYLDFENWKVVNAPGVPDINLSQFWGSMPMR 323
BLAST of EWM27307.1 vs. NCBI_GenBank
Match: gi|698777805|ref|XP_009821946.1| (hypothetical protein H257_00783 [Aphanomyces astaci] >gi|574124071|gb|ETV89546.1| hypothetical protein H257_00783 [Aphanomyces astaci]) HSP 1 Score: 87.0409 bits (214), Expect = 2.210e-17 Identity = 50/141 (35.46%), Postives = 77/141 (54.61%), Query Frame = 0
Query: 1 MELGLLAKGFAQTILAFVRAINPDMKHSFG----------DDNNTTLPHITVPLFHAAESFIITPAGAAPPPLGIN-FVTSETDKA-RRAGKIPLPRFDTTSTISFSFHSMFLDFQTWRLVSFPFIRSLDLHLMWARSAVR 129
M+LG AKG + +L+ + + + +SFG DD LPH+ PL + + FI TPAG PP LG + F+ + ++A RR+GK P F+T T SFSF + +LDF+ W++V+ P + + L W +R
Sbjct: 187 MKLGFFAKGLCRVLLSVINCLVVGLHNSFGRLYPGDVAAVDDEE--LPHLAFPLHSSVDEFICTPAGEDPPALGADGFMETREERAHRRSGKHPY-EFNTHDTYSFSFFNFYLDFENWKVVNAPGVPDIHLAQFWGNMPLR 324
BLAST of EWM27307.1 vs. NCBI_GenBank
Match: gi|635369224|emb|CCI42573.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 86.6557 bits (213), Expect = 2.610e-17 Identity = 41/131 (31.30%), Postives = 65/131 (49.62%), Query Frame = 0
Query: 1 MELGLLAKGFAQTILAFVRAINPDMKHSFGDDNNTTLPHITVPLFHAAESFIITPAGAAPPPLGINFV--TSETDKARRAGKIPLPRFDTTSTISFSFHSMFLDFQTWRLVSFPFIRSLDLHLMWARSAVR 129
+ LG+ K A +L ++ + + +SFGD N LPHI PLF + F TP G P LG+ + T + K R++ + F T +F FH+M++D W+ V+ P I + L + S +R
Sbjct: 256 ISLGIFTKSVALMVLGIIKKLVGKIHYSFGDSKNHELPHIAFPLFQTVDQFTCTPKGQLAPQLGVQVIQETEQAQKHRKSVPVGQETFKVGPTYTFHFHTMYVDLHHWKTVNIPGINDMKLSTFFNSSPLR 386
BLAST of EWM27307.1 vs. NCBI_GenBank
Match: gi|325183690|emb|CCA18149.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 84.7297 bits (208), Expect = 1.370e-16 Identity = 43/132 (32.58%), Postives = 69/132 (52.27%), Query Frame = 0
Query: 1 MELGLLAKGFAQTILAFVRAINPDMKHSFGDDNNTTLPHITVPLFHAAESFIITPAGAAPPPLGINFVTSETDKARRAGKIPL---PRFDTTSTISFSFHSMFLDFQTWRLVSFPFIRSLDLHLMWARSAVR 129
+ LG+L K A +L ++ + + +SFGD + LPH+ PL+ + FI TP G P LG+ + ET++AR+ K L F T +F FH+M++D W+ V+ P I + L + S +R
Sbjct: 256 ISLGILTKSVALMVLGIIKKLVGKIHYSFGDSKDQELPHVAFPLYQTVDQFICTPEGQVAPQLGVEDI-QETEQARKLRKSVLVGQEAFQVGPTYTFHFHTMYVDLLHWKTVNIPGINDMKLSTFFDSSPLR 386
BLAST of EWM27307.1 vs. NCBI_GenBank
Match: gi|1210527119|dbj|GAX14092.1| (hypothetical protein FisN_8Hh072 [Fistulifera solaris]) HSP 1 Score: 83.9593 bits (206), Expect = 2.421e-16 Identity = 42/128 (32.81%), Postives = 65/128 (50.78%), Query Frame = 0
Query: 1 MELGLLAKGFAQTILAFVRAINPDMKHSFGDDNNTTLPHITVPLFHAAESFIITPAGAAPPPLGINFVTSETDKARRAGKIPLPRFDTTSTISFSFHSMFLDFQTWRLVSFPFIRSLDLHLMWARSAV 128
M LGL+ +G A+ +L V+ + ++ +SFG D++ + HI +P F A E +I+TP PP LG + + R ++TT T S F SM++D W+LV P + L W S V
Sbjct: 240 MRLGLVTQGVARLLLKLVQRFHSNVHYSFGTDDDEEMAHIVIPAFTAMEKWIVTPPSQTPPRLGDMWEETPESMQFRKETQSTGSWNTTDTYSMEFFSMYIDLAQWKLVQLPVSGDVALQTFWGDSPV 367 The following BLAST results are available for this feature:
BLAST of EWM27307.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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