rna3359, rna3359 (mRNA) Nannochloropsis gaditana

Overview
Namerna3359
Unique Namerna3359
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length648
Alignment locationCM002461.1:212842..213538 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100192g7.10352.mrna
Orig protein idgnl|cribi|Naga_100192g7.10352
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:212842..213538 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100192g7gene3235Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3359rna3359-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM27324.1cds3350Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3359 ID=rna3359|Name=rna3359|organism=Nannochloropsis gaditana|type=mRNA|length=648bp
ATGCACTATCCCCACGTACACCAGAGACGACCCCTCCTGTCTCCCTTCCT
TCTCGGCCTTGCCCTCATCCTCCCGTCGTTGCAGGCTTTCCTCTTCCCCC
CCCCCCACCCACTTCGCCCAGCCCCTGCCATGTCGTCGCTCCGCCTCTCT
TCTGCCGTGGCCTCCTCCCCTGCCTCCCCGACCTTTTCGACGGTGGTGGA
GCCCGCTAAGCCCAAGGTCGCGCCTGGGACGGATTTGGGGCCCTCCCCCG
TCATATTGGTCGTGGAGGAGACGGAGGCAAGGTCCGAGTTAGACGGGGGC
TGGGAACTCATCCTCTACAACGACGAGGTGAACAGTCGGCACCACGTGGC
ACGAACCTTGACCTCCGTCTGTCAGCTGACGGACGACCGGGCGTATGAGG
TGATGATGACGGCGCACCGGCAAGGGTCTGCGGGGCGCCGGCATTGGCTG
CGACGTCACGAAAGCCGACTCGCCCGAATGAAAAGAAGGGCAATTGAGGC
CGCATGTTTCCAATGGGAGTCCTGTACCTTAGAGTGGCTGTTGCGGATTG
GGATGGAAGGGGATTGTAGAGTAAACGAAGAGAGAAAGGCTTTGGTGGAG
CGGACTTCGGGGGCTAAGAGGGATTCGGCCCGAAGGACTTTGCGCTGA
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protein sequence of rna3359

>rna3359-protein ID=rna3359-protein|Name=rna3359|organism=Nannochloropsis gaditana|type=polypeptide|length=177bp
MLPKPDLFRCTGSCTGSLLSIDGLLKLEKLFFTRHTARTTFALPTRKKVT
KSLIENKLPLPRPGSRPLSSEEEKLTGITMLFSETRSLDPFGTCAYPHRP
CRARLMTYRTPAFLSFIPSPRQAIQGVKSSRFLFKRGDKANPCSQEPQVL
SDDCSFLTNHDGLMKRKNFLLFRREEP
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mRNA from alignment at CM002461.1:212842..213538-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3359 ID=rna3359|Name=rna3359|organism=Nannochloropsis gaditana|type=mRNA|length=697bp|location=Sequence derived from alignment at CM002461.1:212842..213538- (Nannochloropsis gaditana)
ATGCTTCCTAAGCCCGACTTATTTCGCTGCACAGGTTCCTGCACGGGAAG
TTTGCTTTCTATCGACGGTCTCCTCAAATTAGAAAAGCTTTTCTTCACTC
GTCACACTGCAAGAACGACTTTCGCCCTCCCTACCCGGGTAAGCTACGTG
AGCTGACTCTCATGTGATCTTGTTTCCTGTTCACGACATCTTTGCAGGAT
CGTGTCGGCGTGAAAATCATCCTTCAGCATATGAAAGGCATCTAGAAAAA
AGTCACCAAGTCGTTGATCGAAAACAAGCTCCCTCTACCGAGGCCTGGGT
CACGACCCTTGTCTTCTGAAGAAGAAAAGCTAACCGGAATCACTATGTTA
TTTTCTGAGACTCGTTCACTGGATCCTTTTGGCACGTGCGCCTACCCCCA
CCGGCCTTGCAGGGCACGATTGATGACTTATCGGACGCCTGCATTTCTTT
CTTTTATCCCCAGCCCCAGGCAGGCCATTCAGGGTGTCAAAAGCTCGCGA
TTTTTATTCAAGAGAGGTATGTTCACACTGATCTCTCGGCGGTCTTTGGG
TGATGTTAGATAGCGTTATCAGGCGACAAGGCAAATCCGTGCAGTCAGGA
GCCGCAAGTGTTGAGTGATGATTGCTCGTTTTTAACCAATCACGACGGTC
TTATGAAAAGGAAAAACTTCTTGCTGTTTCGAAGAGAAGAGCCTTGA
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Coding sequence (CDS) from alignment at CM002461.1:212842..213538-

>rna3359 ID=rna3359|Name=rna3359|organism=Nannochloropsis gaditana|type=CDS|length=1602bp|location=Sequence derived from alignment at CM002461.1:212842..213538- (Nannochloropsis gaditana)
GCGACAAGGCAAATCCGTGCAGTCAGGAGCCGCAAGTGTTGAGTGATGAT
TGCTCGTTTTTAACCAATCACGACGGTCTTATGAAAAGGAAAAACTTCTT
GCTGTTTCGAAGAGAAGAGCCTTGAAAAAAAGTCACCAAGTCGTTGATCG
AAAACAAGCTCCCTCTACCGAGGCCTGGGTCACGACCCTTGTCTTCTGAA
GAAGAAAAGCTAACCGGAATCACTATGTTATTTTCTGAGACTCGTTCACT
GGATCCTTTTGGCACGTGCGCCTACCCCCACCGGCCTTGCAGGGCACGAT
TGATGACTTATCGGACGCCTGCATTTCTTTCTTTTATCCCCAGCCCCAGG
CAGGCCATTCAGGGTGTCAAAAGCTCGCGATTTTTATTCAAGAGAGATGC
TTCCTAAGCCCGACTTATTTCGCTGCACAGGTTCCTGCACGGGAAGTTTG
CTTTCTATCGACGGTCTCCTCAAATTAGAAAAGCTTTTCTTCACTCGTCA
CACTGCAAGAACGACTTTCGCCCTCCCTACCCGGGCGACAAGGCAAATCC
GTGCAGTCAGGAGCCGCAAGTGTTGAGTGATGATTGCTCGTTTTTAACCA
ATCACGACGGTCTTATGAAAAGGAAAAACTTCTTGCTGTTTCGAAGAGAA
GAGCCTTGAAAAAAAGTCACCAAGTCGTTGATCGAAAACAAGCTCCCTCT
ACCGAGGCCTGGGTCACGACCCTTGTCTTCTGAAGAAGAAAAGCTAACCG
GAATCACTATGTTATTTTCTGAGACTCGTTCACTGGATCCTTTTGGCACG
TGCGCCTACCCCCACCGGCCTTGCAGGGCACGATTGATGACTTATCGGAC
GCCTGCATTTCTTTCTTTTATCCCCAGCCCCAGGCAGGCCATTCAGGGTG
TCAAAAGCTCGCGATTTTTATTCAAGAGAGATGCTTCCTAAGCCCGACTT
ATTTCGCTGCACAGGTTCCTGCACGGGAAGTTTGCTTTCTATCGACGGTC
TCCTCAAATTAGAAAAGCTTTTCTTCACTCGTCACACTGCAAGAACGACT
TTCGCCCTCCCTACCCGGGCGACAAGGCAAATCCGTGCAGTCAGGAGCCG
CAAGTGTTGAGTGATGATTGCTCGTTTTTAACCAATCACGACGGTCTTAT
GAAAAGGAAAAACTTCTTGCTGTTTCGAAGAGAAGAGCCTTGAAAAAAAG
TCACCAAGTCGTTGATCGAAAACAAGCTCCCTCTACCGAGGCCTGGGTCA
CGACCCTTGTCTTCTGAAGAAGAAAAGCTAACCGGAATCACTATGTTATT
TTCTGAGACTCGTTCACTGGATCCTTTTGGCACGTGCGCCTACCCCCACC
GGCCTTGCAGGGCACGATTGATGACTTATCGGACGCCTGCATTTCTTTCT
TTTATCCCCAGCCCCAGGCAGGCCATTCAGGGTGTCAAAAGCTCGCGATT
TTTATTCAAGAGAGATGCTTCCTAAGCCCGACTTATTTCGCTGCACAGGT
TCCTGCACGGGAAGTTTGCTTTCTATCGACGGTCTCCTCAAATTAGAAAA
GCTTTTCTTCACTCGTCACACTGCAAGAACGACTTTCGCCCTCCCTACCC
GG
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Synonyms
Publications